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Are you ready for the new NIH Data Management and Sharing Plan (effective Jan. 25, 2023)? Have questions or need help? Join dkNET Office Hours on Friday, January 13, 2023, 11 am - 12 pm PT!
Congratulations to the D-Challenge winners! Thanks to all who helped make this a success, and thank you to all participants who used the rich ecosystem of online tools and data findable through dkNET to develop the Type 1 Diabetes hypotheses!
Congratulations! The dkNET project and Signaling Pathways Project (SPP) along with NDEx have been named as a finalist in the NIH and FASEB DataWorks! Challenge, which recognizes data reuse in scientific discovery. Discover about our project and vote for our entry before December 21, 2022!
The dkNET team will be attending the Cell Bio 2022 in Washington DC from December 3-7, 2022! Stop by booth #1537 to learn more about our new features and funding opportunities! We would also love to hear your feedback about our portal so we can continue to improve our service to you!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in December, 2022.
Come join us for a dkNET webinar presented by Dr. Monica Westley, Tiffany Richardson, Neha Majety on Friday, December 9, 2022, 11 am PT to learn more about the(sugar)science!
Congratulations to dkNET PIs Drs. Maryann Martone and Jeffrey Grethe, Resource Identification Initiative lead Dr. Anita Bandrowski, and the Antibody Registry team on publishing a new paper "The Antibody Registry: ten years of registering antibodies" in Nucleic Acids Research today!
dkNET team will present at the CAIRIBU (Collaborating for the Advancement of Interdisciplinary Research in Benign Urology) ARCTICS Community Forum "Making the Most of Available Resources: Where can I find them and how can they strengthen my research program?"on Wednesday, November 16, 2022. Join us to learn how dkNET can help with your research!
Come join us for a webinar presented by MacKenzie Brandes on Friday, November 18, 2022 to learn more about the Accelerating Medicines Partnership Common Metabolic Diseases Knowledge Portal (AMP-CMDKP)!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in November, 2022.
Come join us for a webinar presented by Dr. Jeffrey Grethe on Friday, October 28, 2022 to learn about dkNET’s Resource Reports. Dr. Grethe will give you live demos including how to find and select a research resource such as an antibody or cell line, how to find RRIDs and proper citation of your resources, and how to register resources to obtain RRIDs.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in October, 2022.
Come join us for a webinar presented by Drs. Katy Börner and Jeffrey Spraggins on Friday, October 14, 2022 to learn about the Human BioMolecular Atlas Program (HuBMAP), an open and global framework for comprehensively mapping the human body at cellular resolution!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in September, 2022.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in August, 2022.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in July, 2022.
Congratulations to the dkNET team - Dr. Neil McKenna, the Principal Investigator of the Signaling Pathways Project, Dr. Jeffrey Grethe, the Principal Investigator of dkNET, and co-authors on publishing a paper “Transcriptional regulatory networks of circulating immune cells in type 1 diabetes: a community knowledgebase” in iScience!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in June, 2022.
Come join us for a webinar presented by Dr. Rafael Arrojo e Drigo on Friday, May 20, 2022 to learn about how to apply different microscopy tools to bridge spatial and temporal scales in biology to quantify protein complex, organelle, and cell age in tissues. Dr. Rafael Arrojo e Drigo is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in May, 2022.
Come join us for a webinar presented by Dr. Kenneth Young, on Friday, May 13, 2022 to learn about Integrative Artificial Intelligence Approach To Predict Type 1 Diabetes. Dr. Kenneth Young is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
Come join us for a webinar presented by Dr. Alok V. Joglekar on Friday, April 27, 2022 to learn about T cell antigen discovery and research performed in the Joglekar lab towards applying experimental and computational approaches for auto-antigen discovery in Type 1 Diabetes. Dr. Alok V. Joglekar is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in April, 2022.
Come join us for a webinar presented by Dr. Jack Virostko on Friday, April 22, 2022 to learn about MRI techniques for interrogating the pancreas and how machine learning may improve our understanding of pancreas changes in individuals with diabetes. Dr. Jack Virostko is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
Is the answer to Type 1 Diabetes already out there? Can you find it? The D-Challenge is a bioinformatics challenge focused on Type 1 diabetes.
The dkNET team will be attending the Experimental Biology 2022 in Philadelphia PA from April 2-5, 2022! Stop by booth #1130 to learn more about our new features and funding opportunities! We would also love to hear your feedback about our portal so we can continue to improve our service to you!
[Postponed] Come join us for a webinar presented by Dr. Rafael Arrojo e Drigo on Friday, April 8, 2022 to learn about beta cell biology in space and time! Dr. Rafael Arrojo e Drigo is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in March, 2022.
Come join us for a webinar presented by Dr. John F. Rawls and Jessica R. McCann on Friday, March 11, 2022 to learn about POMMS (RRID:SCR_021071), a study and biorepository of clinical, metabolomic, and microbiome samples from adolescents with obesity as they undergo lifestyle modification!
Come join us for a webinar presented by Dr. Alan Rupp on Friday, February 25, 2022 to learn about the novel mediators and mechanisms of leptin action, and cell populations and molecular pathways that represent potential targets for obesity therapy! Dr. Alan Rupp is the 2021 dkNET New Investigator Pilot Program in Bioinformatics awardee.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in February, 2022.
Come join us for a webinar presented by Dr. Maryann Martone on Friday, February 11, 2022 to learn about SPARC, a portal supported by the NIH Common Fund to provide a scientific and technological foundation for future bioelectronic medicine devices and protocols.
There are several articles related to reproducibility published recently. Check out these articles to learn how to make cancer biology research more reproducible, the reasons reproducibility reform fails, reproducibility in microscopy, and more!
dkNET Co-PI Dr. Maryann Martone will present at the upcoming State of the Science 2022: Cutting Edge Technologies /In Silico Solutions for T1D Research. Join us for this informative conversation and learn new tools!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in January, 2022.
Come join us for a webinar presented by Drs Marcela Brissova, Jean-Philippe Cartailler, and Diane Saunders on Friday, January 28, 2022 to learn about the Pancreatlas, an online resource that houses and links human pancreas imaging data with clinical data to facilitate advances in the understanding of diabetes, pancreatitis, and pancreatic cancer!
Congratulations to the D-Challenge winners! Thanks to all who helped make this a success, and thank you to all participants who used the rich ecosystem of online tools and data findable through dkNET to develop the Type 1 Diabetes hypotheses!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in December, 2021.
Come join us for a webinar presented by Dr. Michael MacCoss on Friday, December 10, 2021 to learn about the PanoramaWeb, a resource to manage, share, and collaborate on quantitative mass spectrometry experiments!
The dkNET team will be hosting two networking sessions at the ASCB/EMBO Annual Meeting Cell Bio Virtual 2021! Come join us to discuss challenges in using bioinformatics tools for bench researchers, and learn about FAIR data and new NIH mandates on data management and sharing on December 6 and December 7, 2021!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in November, 2021.
Come join us for a webinar presented by Dr. Bert Gough on Friday, November 12, 2021 to learn about the Microphysiology Systems Database (MPS-Db), a platform developed for the management, analysis, sharing, integration of preclinical and clinical information, computational modeling of data, and enhancing the in vitro model value and user workflow!
Congratulations to dkNET team member Dr. I Burak Ozyurt, who won first place in the 2021 BioASQ Challenge Task 9b!
Come join us for a webinar presented by Dr. Carl Laflamme on Friday, October 22, 2021 to learn about a useful resource YCharOS and learn how YCharOS characterizes through open science and contribute to make science more reproducible!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in October, 2021.
Come join us for a webinar presented by Dr. Robert W. Williams on Friday, October 8, 2021 to learn about experimental precision medicine and smart FAIR+ Data for metabolomics and diabetes Research!
Join live dkNET webinar learning how to use the dkNET Hypothesis Center to answer your research questions and generate hypotheses on Friday, September 24, 2021 at 11am PT!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in September, 2021.
Is the answer to Type 1 Diabetes already out there? Can you find it? The D-Challenge is a bioinformatics challenge focused on Type 1 diabetes. Enter as a team or an individual to compete for cash awards!
dkNET Hypothesis Center is new and exciting. Learn about how it works and how to use it in a brief, interactive webinar.
The RRID and dkNET team has been collaborating with the Human Pancreatic Analysis Program (HPAP) working on identifying donor pancreas biosamples. Now researchers can find RRIDs for HPAP biosamples and know who else published data from the same donors!
What's exciting about RRID's? dkNET Resource Reports support robust & reproducible science. Attend a live, interactive webinar and learn how to access and use a wealth of Research Resource Identifiers.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in August, 2021.
dkNET is partnered with the(sugar)science to create innovative events and tools for scientists and researchers! We are launching the dkNET academy this summer. Learn about the upcoming events including D-Challenge, Bootcamps, Off the Record, Clubhouse events, Intern diaries, dkNET paper of the week, and Lunch and Learn!
Congratulations! dkNET Principal Investigator Dr. Maryann Martone and collaborators Drs. Fiona Murphy and Michael Bar-Sinai published a new article "A tool for assessing alignment of biomedical data repositories with open, FAIR, citation and trustworthy principles" in PLOS ONE! Learn about this helpful new tool for evaluating how well repositories support Open, FAIR, Citable and Trustworthy (OFCT) data!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in July, 2021.
Integrating archived SARS-CoV-2 infection transcriptomic datasets with signaling node transcriptomic datasets, SPP analytics generated novel hypotheses around SARS-CoV-2 infection that were subsequently independently confirmed by wet bench research laboratories.
Using MMPC data generated across four MMPC Centers, researchers found that body composition and ambient temperature are the biggest influence on energy balance.
Want to apply for an NIH grant? You WILL NEED THIS ! Learn how to use dkNET tools to help make sure your data is FAIR - Findable, Accessible, Interoperable, and Reproducible! Join dkNET FAIR data resource bootcamp on June 22 at 1pm PDT!
Congratulations to Dr. Chun-Nan Hsu and co-authors from the dkNET team, RRID team, FAIR Data Informatics Lab at University of California San Diego, and collaborators at National Central University in Taiwan on publishing a new paper "Antibody Watch: Text Mining Antibody Specificity from the Literature" in PLOS Computational Biology!
dkNET is excited to announce our new partnership with the(sugar)science to increase the awareness of tools and services in supporting Type 1 diabetes research!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in June, 2021.
dkNET Hypothesis Center - Signaling Pathways Project (SPP) team collaborated with liver researchers and published a paper "A human liver chimeric mouse model for non-alcoholic fatty liver disease" in JHEP Reports. Scientists used SPP's NAFLD consensome to discover that NAFLD livers, compared to normal ones, have consistently higher levels of cholesterol synthesis enzyme transcripts!
Come join us for a webinar presented by Dr. Avi Ma'ayan on Friday, May 28, 2021 to learn about Appyters, a useful web application that enables the rapid development of interactive web-based bioinformatics applications.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in May, 2021.
Come join us for a webinar presented by Dr. Zhandong Liu on Friday, May 14, 2021 to learn about solving the Undiagnosed Diseases through Machine Learning!
The dkNET team will be attending the Experimental Biology 2021 from April 27-30 2021! Stop by our virtual booth to learn more about our new features and funding opportunities. We would also love to hear your feedback about our new portal so we can continue to improve our service to you!
Congratulations! dkNET Principal Investigator Dr. Maryann Martone and collaborators Drs. Fiona Murphy and Michael Bar-Sinai released a new version of the preprint "A tool for assessing alignment of biomedical data repositories with open, FAIR, citation and trustworthy principles" in bioRxiv! Learn about this helpful new tool for evaluating how well repositories support Open, FAIR, Citable and Trustworthy (OFCT) data!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in April, 2021.
Come join us for a webinar presented by the dkNET Pilot Program in Bioinformatics Awardee, Dr. Wei Zhang, on Friday, April 9, 2021 to learn about bioinformatics techniques of multi-omics data integration for phenotype prediction of type 1 diabetes in TEDDY project!
Thanks for the invitation from the(Sugar)Science! It was our pleasure to have an opportunity to introduce the dkNET resources to the Type 1 Diabetes researcher community via Facebook live on February 19, 2021.
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in March, 2021.
Come join us for a webinar presented by the dkNET Pilot Program in Bioinformatics Awardee, Dr. Qian Li, on Friday, March 12, 2021 to learn about Temporal Plasma Metabolome And Gut Microbiome In An Early-Childhood Study Of Type 1 Diabetes!
The RRID team has been collaborating with the Network for Pancreatic Organ donors with Diabetes(nPOD) working on identifying biosamples. Last week nPOD launched RRIDs for all nPOD biosamples at their annual meeting! The RRIDs are based on the public, non-personally identifiable information submitted to NCBI/EBI biosamples databases. Now researchers can find RRIDs for nPOD biosamples and know who else published data from the same donors!
Come join us for a webinar presented by the dkNET Pilot Program in Bioinformatics Awardee, Dr. Marcus Seldin, on Friday, February 26, 2021 to learn about population-based approaches to investigate endocrine communication!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in February, 2021.
dkNET Principal Investigator Dr. Maryann Martone and collaborators Drs. Fiona Murphy and Michael Bar-Sinai released a new preprint "Alignment of biomedical data repositories with open, FAIR, citable and trust-worthy principles" in bioRxiv! Learn about this helpful new tool for evaluating how well repositories support Open, FAIR, Citable and Trustworthy (OFCT) data!
Come join us for a webinar presented by Dr. Ben N. G. Giepmans on Friday, February 12, 2021 to learn more about the technique and the recent database of Nanotomy (http://www.nanotomy.org) of human pancreas tissue obtained from the Network for Pancreatic Organ Donors (nPOD) with Diabetes!
Good data stewardship is the cornerstone of knowledge, discovery, and innovation in research. The FAIR Data Principles address data creators, stewards, software engineers, publishers, and others to promote maximum use of research data. The principles can be used as a framework for fostering and extending research data services. Come join us for a webinar presented by Christopher Erdmann on Friday, January 22, 2021 to learn more about FAIR principles. Practical examples of how FAIR is applied will be provided along the way!
dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org. Here is the summary list of the dkNET updates, community events and funding opportunities in January, 2021.