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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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MetaQC Resource Report Resource Website 10+ mentions |
MetaQC (RRID:SCR_006000) | software resource | Software for quality control and diagnosis for microarray meta-analysis. Quantitative quality control measures include: (1) internal homogeneity of co-expression structure among studies (internal quality control; IQC); (2) external consistency of co-expression structure correlating with pathway database (external quality control; EQC); (3) accuracy of differentially expressed gene detection (accuracy quality control; AQCg) or pathway identification (AQCp); (4) consistency of differential expression ranking in genes (consistency quality control; CQCg) or pathways (CQCp). For each quality control index, the p-values from statistical hypothesis testing are minus log transformed and PCA biplots were applied to assist visualization and decision. Results generate systematic suggestions to exclude problematic studies in microarray meta-analysis and potentially can be extended to GWAS or other types of genomic meta-analysis. The identified problematic studies can be scrutinized to identify technical and biological causes (e.g. sample size, platform, tissue collection, preprocessing etc) of their bad quality or irreproducibility for final inclusion / exclusion decision. | standalone software, mac os x, unix/linux, windows, r, FASEB list |
is listed by: OMICtools has parent organization: CRAN |
PMID:22116060 | GNU General Public License, v2 | OMICS_04032 | https://github.com/donkang34/MetaQC | SCR_006000 | MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis, MetaQC: Objective Quality Control and Inclusion / Exclusion Criteria for Genomic Meta-Analysis | 2026-08-15 11:23:19 | 40 | ||||||
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Quantum Dot Corporation Resource Report Resource Website |
Quantum Dot Corporation (RRID:SCR_005941) | commercial organization |
THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.\\\\\\ \\\\\\ An Antibody supplier |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152443 | SCR_005941 | 2026-08-15 11:23:19 | 0 | |||||||||||
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ProQuest Dissertation Publishing Resource Report Resource Website |
ProQuest Dissertation Publishing (RRID:SCR_006075) | ProQuest Dissertation Publishing | service resource | ProQuest Dissertation Publishing has been publishing dissertations and theses since 1938. In that time, we have published over 2 million graduate works from graduate schools around the world. We have over 700 active university publishing partners, and publish more than 70,000 new graduate works each year. In addition to publishing, we provide access to graduate works for thousands of libraries around the world. Based on your interests, you should find the information you need below: * Authors - Information for authors on why and how to publish their graduate work with us. * Grad Schools & Libraries - Learn about the benefits of publishing, and why to submit online. * Researchers - We can help you find the dissertation or thesis you need. | dissertation, publishing, thesis, graduate, library, research, author |
is related to: ProQuest Dissertations and Theses Global has parent organization: ProQuest |
nlx_151558 | SCR_006075 | 2026-08-15 11:23:16 | 0 | |||||||||
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Workflow4Ever Resource Report Resource Website 1+ mentions |
Workflow4Ever (RRID:SCR_005939) | Wf4Ever | knowledge environment | Project to addresses challenges associated with the preservation of scientific experiments in data-intensive science, including: * The definition of models to describe, in a standard way, scientific experiments by means of workflow-centric Research Objects, which comprise scientific workflows, the provenance of their executions, interconnections between workflows and related resources (e.g., datasets, publications, etc.), and social aspects related to such scientific experiments. * The collection of best practices for the creation and management of Research Objects. * The analysis and management of decay in scientific workflows. To address these challenges they are creating an architecture and tooling for the access, manipulation, sharing, reuse and evolution of Research Objects in a range of disciplines. This will result into the next generation RO-enabled myExperiment. | preservation, workflow, provenance, archive, research object, workflow model, management, experimental method |
is listed by: FORCE11 is related to: myExperiment is related to: RightField |
European Union | nlx_151286 | SCR_005939 | 2026-08-15 11:23:16 | 1 | ||||||||
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University of North Texas; Texas; USA Resource Report Resource Website |
University of North Texas; Texas; USA (RRID:SCR_005935) | UNT | university | Public research university in Denton, Texas. | is related to: Alzheimers Disease Genetics Consortium | grid.266869.5, nlx_157964, Wikidata:Q860527, ISNI:0000 0001 1008 957X, Crossref funder ID:100008973 | https://ror.org/00v97ad02 | SCR_005935 | University of North Texas | 2026-08-15 11:23:15 | 0 | ||||||||
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ReproCELL Incorporated Resource Report Resource Website |
ReproCELL Incorporated (RRID:SCR_005973) | commercial organization | An Antibody supplier | nlx_152450 | SCR_005973 | 2026-08-15 11:23:16 | 0 | ||||||||||||
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BASH4RfMRI Resource Report Resource Website |
BASH4RfMRI (RRID:SCR_005970) | software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented July 23, 2015. Of note: most functions have been integrated in 1000 Functional Connectomes Project (www.nitrc.org/projects/fcon_1000). This package is not updated, thus please visit 1000 Functional Connectomes Project site and download relevant bash scripts. BASH Scripts for a resting-state functional MRI study. The functions include seed-based correlation analysis, amplitude analysis and independent component analysis. Note: this tool is just a plug-in for FSL, AFNI and FreeSurfer. Thus, you need have them before you use BASH4RfMRI. | algorithm or reusable library, information theory, spectral analysis, correlation, multivariate analysis, platform or development environment, magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: FSL is related to: Analysis of Functional NeuroImages is related to: FreeSurfer is related to: 1000 Functional Connectomes Project |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151343 | SCR_005970 | BASH Scripts, bash-rs-fcmri | 2026-08-15 11:23:16 | 0 | ||||||||
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Doris Duke Charitable Foundation Resource Report Resource Website 10+ mentions |
Doris Duke Charitable Foundation (RRID:SCR_006012) | DDCF | institution | The mission of the Doris Duke Charitable Foundation is to improve the quality of people''s lives through grants supporting the performing arts, environmental conservation, medical research and the prevention of child abuse, and through preservation of the cultural and environmental legacy of Doris Duke''s properties. Established in 1996, the foundation supports four national grant-making programs. It also supports three properties that were owned by Doris Duke in Hillsborough, New Jersey; Honolulu, Hawaii; and Newport, Rhode Island. The foundation is headquartered in New York and is governed by a board of 12 Trustees. DDCF''s activities are guided by the will of Doris Duke, who endowed the foundation with financial assets that totaled approximately $1.6 billion as of December 31, 2010. The foundation regularly evaluates and modifies its allocation of resources from the endowment to support the programs and properties and to respond to fluctuations in portfolio returns. The foundation awarded its first grants in 1997. As of December 31, 2011, the foundation has awarded grants totaling more than $1 billion. DDCF awards grants in four core program areas: * The Arts Program supports performing artists with the creation and public performance of their work. * The Environment Program supports efforts that enable communities to protect and manage wildlife habitat and create efficient built environments. * The Medical Research Program seeks to contribute to the prevention and cure of disease by supporting clinical research. * The Child Abuse Prevention Program seeks to protect children from abuse and neglect in order to promote their healthy development. In the fall of 2007, DDCF also launched the African Health Initiative, with the goal of strengthening health systems in sub-Saharan Africa. The Building Bridges Program, which seeks to increase public understanding of Islamic cultures through media and the arts, is funded through the Doris Duke Foundation for Islamic Art and is headquartered in DDCF''s offices in New York. The Properties In her will, Doris Duke requested that several operating foundations manage the properties listed below. She also expressed her wishes that the properties be opened for public visitation and used for educational programs. The operating foundations receive funding from the Doris Duke Charitable Foundation. * The Duke Farms Foundation manages a 2,700-acre property in Hillsborough, New Jersey, which is known as Duke Farms and has a mission of environmental stewardship. * The Doris Duke Foundation for Islamic Art manages Doris Duke''s home in Honolulu, Hawaii, which is known as Shangri La and serves as a center for the study of Islamic art and cultures. * The Newport Restoration Foundation preserves historic houses in Newport, Rhode Island, and operates Doris Duke''s home in Newport known as Rough Point, which is also a public museum. | art, environment, medical research, child abuse, prevention, grant, african, health | nlx_151423, grid.453038.9, ISNI: 0000 0001 0570 6924, Crossref funder ID: 100000862 | https://ror.org/04n65rp89 | SCR_006012 | 2026-08-15 11:23:16 | 41 | |||||||||
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NOVA Biologics Resource Report Resource Website |
NOVA Biologics (RRID:SCR_005985) | commercial organization | An Antibody supplier | nlx_152422 | SCR_005985 | NOVA Biologics Inc., NOVA Biologics Inc | 2026-08-15 11:23:16 | 0 | |||||||||||
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Milken Institute; California; USA Resource Report Resource Website 1+ mentions |
Milken Institute; California; USA (RRID:SCR_011243) | institution | Nonprofit, nonpartisan think tank that helps people build meaningful lives. Center for Regional Economics and California Center. | is parent organization of: Consortia-pedia | nlx_157864, grid.475427.7, ISNI: 0000 0000 9088 4989, Wikidata: Q17090319 | https://ror.org/03f5t6469 | SCR_011243 | Milken Institute | 2026-08-15 11:24:09 | 1 | |||||||||
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Free University of Berlin; Berlin; Germany Resource Report Resource Website 1+ mentions |
Free University of Berlin; Berlin; Germany (RRID:SCR_011246) | university | Public research university in Berlin, Germany. The Free University of Berlin is one of eleven elite German research universities in the German Universities Excellence Initiative. |
is parent organization of: D2R Server - Publishing Relational Databases on the Semantic Web is parent organization of: Centroid Trajectory Analysis is parent organization of: RazerS is parent organization of: Virtual Atlas of the Honeybee Brain is parent organization of: Charite - Universitatsmedizin Berlin; Berlin; Germany is parent organization of: MicroRazerS is parent organization of: DBpedia |
grid.14095.39, nlx_40982, Crossref funder ID:501100002971, Wikidata:Q153006, ISNI:0000 0000 9116 4836 | https://ror.org/046ak2485 | SCR_011246 | Freie Universitat Berlin, Free University of Berlin, Freie Universit�t Berlin | 2026-08-15 11:24:10 | 4 | |||||||||
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French National Center for Scientific Research Resource Report Resource Website 1+ mentions |
French National Center for Scientific Research (RRID:SCR_011247) | CNRS | institution | A government-funded research organization with the following missions: * To evaluate and carry out all research capable of advancing knowledge and bringing social, cultural, and economic benefits for society. * To contribute to the application and promotion of research results. * To develop scientific information. * To support research training. * To participate in the analysis of the national and international scientific climate and its potential for evolution in order to develop a national policy. As the largest fundamental research organization in Europe, CNRS carried out research in all fields of knowledge, through its seven institutes: * Institute of Biological Sciences (INSB) * Institute of Chemistry (INC) * Institute of Ecology and Environment (INEE) * Institute for Humanities and Social Sciences (INSHS) * Institute for Computer Sciences (INS2I) * Institute for Engineering and Systems Sciences (INSIS) * Institute of Physics (INP) and three national institutes: * National Institute for Mathematical Sciences (INSMI) * National Institute of Nuclear and Particle Physics (IN2P3) * National Institute for Earth Sciences and Astronomy (INSU) CNRS''s annual budget represents a quarter of French public spending on civilian research. This funding comes from various sources: * Government and public funding; * CNRS funds, primarily from industrial and EU research contracts and royalties on patents, licenses, and services provided. |
uses: DataCite is related to: Genolevures is related to: eTRIKS is related to: IMIDIA is related to: PharmaCog is related to: Beta Cell Biology Consortium has parent organization: French Ministry of Higher Education and Research is parent organization of: FusionDB is parent organization of: MethDB is parent organization of: SocioPatterns is parent organization of: Narcisse is parent organization of: PHYTOPROT |
grid.4444.0, Crossref funder ID: 501100004794, ISNI: 0000 0001 2112 9282, Wikidata: Q280413, nlx_98477 | https://ror.org/02feahw73 | SCR_011247 | National Center for Scientific Research, Centre National de la Recherche Scientifique | 2026-08-15 11:24:19 | 9 | ||||||||
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FRQS Resource Report Resource Website 1+ mentions |
FRQS (RRID:SCR_011253) | FRQS | government granting agency | The FRQS (Fonds de recherche du Québec - Santé) is a non-profit funding agency created under the Act Respecting the Ministère du Développement économique, de l'Innovation et de l'Exportation (L.R.Q., c. M-30.01). We report to the Minister in charge of Québec's department for economic development, innovation and export trade (ministère du Développement économique, de l'Innovation et de l'Exportation) and our mandate is to implement government strategy with respect to human health research as presented in the Québec Research and Innovation Strategy. The FRQS was established in 1964 by Québec's health department under the name Conseil de recherches médicales. A pioneer in both Québec and Canada, the FRQS advised the health minister in matters of medical research. Forty years later, the FRQS plays a leading role in planning and coordinating the development of health research in Québec. The FRQS allocates $100 million annually in awards and grants for public-sector research into human health carried out today in universities and hospital-based research centers. We fund projects using any of the recognized methodologies (basic, clinical, epidemiological, public health, health services and the social determinants of health). To fulfill our mission and maximize the economic and health benefits of scientific investigation, we invest in: *top-performing research investigators and students *research centers, groups and networks *excellence, innovation and the dissemination of knowledge *social responsibility and ethical practices *synergy and partnership, THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | is parent organization of: Cancer Research Network of the FRSQ | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_143642 | SCR_011253 | Fonds de recherche du Québec - Santé | 2026-08-15 11:24:10 | 6 | ||||||||
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Fujian Agriculture and Forestry University; Fujian; China Resource Report Resource Website 1+ mentions |
Fujian Agriculture and Forestry University; Fujian; China (RRID:SCR_011254) | FAFU | university | Fujian Agriculture and Forestry University is a leading higher education institution in Fujian Province, jointly supported by the Ministry of Agriculture, the State Forestry Administration and the Fujian Provincial Government in China. | is parent organization of: DBM-DB | nlx_157684, Crossref funder ID:501100008766, Wikidata:Q5507366, ISNI:0000 0004 1760 2876, grid.256111.0 | https://ror.org/04kx2sy84 | SCR_011254 | Fujian Agriculture and Forestry University | 2026-08-15 11:24:19 | 9 | ||||||||
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Gachon University; Seongnam; South Korea Resource Report Resource Website 1+ mentions |
Gachon University; Seongnam; South Korea (RRID:SCR_011255) | Gachon University | university | Academic institute located in South Korea. The current structure of Gachon university is the result of a merger between four existing universities. | is parent organization of: Gachon University of Medicine and Science; Incheon; South Korea | ISNI:0000 0004 0647 2973, Wikidata:Q56147, grid.256155.0, Crossref funder ID:501100002631, nlx_149298 | https://ror.org/03ryywt80 | SCR_011255 | Gachon University | 2026-08-15 11:24:24 | 5 | ||||||||
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George Washington University; Washington D.C.; USA Resource Report Resource Website 1+ mentions |
George Washington University; Washington D.C.; USA (RRID:SCR_011214) | GWU | university | Private research university in Washington, D.C. It was chartered in 1821 by an act of the United States Congress. |
is related to: National Chimpanzee Brain Resource is parent organization of: Genetics of Kidneys in Diabetes is parent organization of: Epidemiology of Diabetes Interventions and Complications is parent organization of: Diabetes Prevention Program is parent organization of: Diabetes Prevention Program Outcomes Study is parent organization of: Treatment Options for type 2 Diabetes in Adolescents and Youth is parent organization of: Medical Therapy of Prostatic Symptoms is parent organization of: George Washington University, Cognitive Neuroscience is parent organization of: George Washington University, Department of Pharmacology and Physiology is parent organization of: List Of Lists Annotated is parent organization of: George Washington University Medical Center Pharmacogenomics Program is parent organization of: SICER is parent organization of: BioXpress is parent organization of: George Washington University Milken Institute School of Public Health Genomics Core Facility is parent organization of: George Washington University McCormick Bioinformatics Core Facility |
grid.253615.6, nlx_31859, ISNI:0000 0004 1936 9510, Crossref funder ID:100007108, Wikidata:Q432637 | https://ror.org/00y4zzh67 | SCR_011214 | George Washington University | 2026-08-15 11:24:22 | 2 | ||||||||
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European Research Council Resource Report Resource Website 500+ mentions |
European Research Council (RRID:SCR_011216) | ERC | institution | Independent body that funds investigator-driven frontier research in the European Union (EU). It is part of the Seventh Research Framework Programme (FP7). | nlx_157724, Wikidata: Q1377836, Crossref funder ID: 100010663, grid.452896.4, ISNI: 0000 0000 8923 0953 | https://ror.org/0472cxd90 | SCR_011216 | 2026-08-15 11:24:18 | 650 | ||||||||||
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Gifu University; Gifu; Japan Resource Report Resource Website |
Gifu University; Gifu; Japan (RRID:SCR_011217) | Gidai | university | National university in the city of Gifu, Gifu Prefecture, Japan. It is sometimes abbreviated as Gidai or Gifudai. The Tokai National Higher Education and Research System established by integrating with Nagoya University in April 2020, both are major universities in Central Japan. | is parent organization of: PPDB: Plant Promoter Database | Wikidata:Q1375986, grid.256342.4, ISNI:0000 0004 0370 4927, nlx_157650 | https://ror.org/024exxj48 | SCR_011217 | Gifu Daigaku, Gifu University | 2026-08-15 11:24:22 | 0 | ||||||||
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European Science Foundation Resource Report Resource Website 10+ mentions |
European Science Foundation (RRID:SCR_011218) | ESF | institution | The establishment of the European Science Foundation (ESF) in Strasbourg in 1974 was one of the earliest milestones on the road to achieving real cooperation in European research. The ESF began life with a membership of 42 academies and research councils in 15 countries; in 2011 it counts 78 Member Organizations (MOs), including research funding organizations, research performing organizations, academies and learned societies, in 30 countries. As an independent, non-governmental organization dedicated to pan-European scientific networking and collaboration, the ESF has had a key role to play in mediating between a multitude of heterogeneous research cultures and agencies. The ESF hosts an array of instruments to accommodate various types and levels of international collaboration, within Europe and beyond. The ESF''s unique characteristic in this area is its responsiveness to the scientific community, in contrast with the more targeted approaches taken by the European Commission. Many of the instruments operated by the ESF, e.g. Exploratory Workshops, EUROCORES (European Collaborative Research scheme), Research Networking Programmes (RNPs) and ESF Research Conferences, are designed to respond to needs articulated by the research community. Open calls for proposals are published on an annual basis, so that the themes for programmes, networks and workshops are gathered from the research community, in line with the ESF''s bottom-up principles. This is particularly welcome in research areas which might not otherwise be prioritized for funding on an international level. In recent years, the ESF''s profile has shifted from being mainly a facilitator of collaborative research and networking to also providing a platform for Member Organizations to develop joint strategic operations and synergy among themselves. By influencing the strategic agendas of MOs in this way, greater leverage over a much larger European budget and agenda is achieved. In other words, the ESF maximizes the impact of its support to the research community by combining bottom-up and topdown approaches to scientific cooperation. | nlx_47040, Wikidata: Q764847, Crossref funder ID: 501100000782, grid.16719.38, ISNI: 0000 0004 0408 2146 | https://ror.org/04esata81 | SCR_011218 | 2026-08-15 11:24:09 | 19 | ||||||||||
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European Union Resource Report Resource Website 100+ mentions |
European Union (RRID:SCR_011219) | EU | organization | The European Union is a unique economic and political partnership between 27 European countries. It has delivered half a century of peace, stability, and prosperity, helped raise living standards, launched a single European currency, and is progressively building a single Europe-wide market in which people, goods, services, and capital move among Member States as freely as within one country. The EU provides funding and grants for a broad range of projects and programs. The EU was created in the aftermath of the second world war. The first steps were to foster economic cooperation: countries that trade with one another are economically interdependent and will thus avoid conflict. Since then, the union has developed into a huge single market with the euro as its common currency. What began as a purely economic union has evolved into an organization spanning all areas, from development aid to environmental policy. |
is parent organization of: Innovative Medicines Initiative is parent organization of: FLYSNP is parent organization of: CORDIS is parent organization of: European Commission is parent organization of: European Medicines Agency is parent organization of: RD-CONNECT |
grid.453396.e, nlx_67420, ISNI: 0000 0001 2290 4914 | https://ror.org/019w4f821 | SCR_011219 | EU | 2026-08-15 11:24:18 | 371 |
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