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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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University of Pennsylvania; Philadelphia; USA Resource Report Resource Website 10+ mentions |
University of Pennsylvania; Philadelphia; USA (RRID:SCR_004275) | UPenn, Penn State | university | University of Pennsylvania is private Ivy League research university located in University City neighborhood of Philadelphia, Pennsylvania. Established in 1740, UPenn has 4 undergraduate schools and 12 graduate schools. | undergraduate, graduate, master's, doctoral, phD, institution, university |
uses: Research Accelerator is affiliated with: Diabetes Research Centers is related to: International AMD Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: Cooperative Human Tissue Network is related to: PIVOT software is related to: Urinary Stone Disease Research Network is parent organization of: Penn Cell and Developmental Biology Zebrafish Core is parent organization of: Penn Clinical Research Computing Unit is parent organization of: Penn Community Outreach Using Health System Informatics Core is parent organization of: Penn Hippocampus Atlas is parent organization of: NIH/Merial Veterinary Scholars Program is parent organization of: Penn Diabetes Research Center Mouse Phenotyping Physiology and Metabolism Core is parent organization of: Penn Research Instrumentation Shop is parent organization of: Penn Small Animal Imaging Facility: PET/SPECT/CT Sub-Core is parent organization of: Penn Translational Biomarker Core is parent organization of: Diffusion Tensor Imaging ToolKit is parent organization of: ApiDots is parent organization of: Hierarchical Attribute Matching Mechanism for Elastic Registration is parent organization of: ITK-SNAP is parent organization of: Database of Transcribed Sequences is parent organization of: PennCNV is parent organization of: Brain lesion segmentation tool using SVM is parent organization of: RNA Abundance Database is parent organization of: Cognitive Electrophysiology Data Portal is parent organization of: ANTS - Advanced Normalization ToolS is parent organization of: Atrophy Simulation Package is parent organization of: 3DViewnix is parent organization of: miRGen is parent organization of: OrthoMCL DB: Ortholog Groups of Protein Sequences is parent organization of: University of Pennsylvania School of Medicine Penn Diabetes Research Center Pancreatic Islet Cell Biology Core Facility is parent organization of: BRAID is parent organization of: AHEAD is parent organization of: Penn Laser Confocal Microscope Core is parent organization of: DRAMMS is parent organization of: fMRI Grocer is parent organization of: Penn Automated Claims and Medical Record Databases is parent organization of: CHOP Biostatistics and Data Management Core is parent organization of: CHOP CTRC Behavioral Neurosciences Core is parent organization of: CHOP CTRC Cardiovascular Imaging Core is parent organization of: CHOP CTRC Nutrition Core Nutrition Assessment is parent organization of: CHOP CTRC Ophthalmology Core is parent organization of: CHOP Clinical Trials Office is parent organization of: CHOP Human Embryonic stem cell/induced pluripotent stem cell Core is parent organization of: CHOP Nucleic Acid/Protein Core is parent organization of: CHOP Pathology Core Laboratories is parent organization of: Penn/CHOP CTRC Informatics Services Core is parent organization of: Monell Behavioral and Physiological Phenotyping Core is parent organization of: Monell Chemosensory Receptor Signaling Core is parent organization of: Monell Genotyping and DNA/RNA Analysis Core is parent organization of: Monell Histology and Cellular Localization Core is parent organization of: Penn Mass Spectrometry Molecular Profiling Core is parent organization of: Penn BioMechanics Core Facility is parent organization of: Penn Biological Chemistry Resource Center is parent organization of: Penn Cancer Histology Core is parent organization of: Penn Cell Center Services Facility is parent organization of: Penn Cell Center Stockroom is parent organization of: Penn Cell and Developmental Biology Microscopy Core is parent organization of: Penn Chemistry NMR Facility is parent organization of: Penn Clinical Cell and Vaccine Production Facility is parent organization of: Penn Community Engagement and Research Core is parent organization of: Penn/CHOP CTRC Bionutrition Research Core Dietary Assessment is parent organization of: Penn Electron Microscopy Resource Laboratory is parent organization of: Penn Flow Cytometry and Cell Sorting Resource Laboratory is parent organization of: Penn Investigational Drug Service is parent organization of: Penn Gene Targeting Service is parent organization of: University of Pennsylvania Molecular Profiling Facility is parent organization of: Penn High-Throughput Sequencing Facility is parent organization of: University of Pennsylvania High-performance Computing is parent organization of: Penn Histology and Gene Expression Core is parent organization of: Penn Human Immunology Core is parent organization of: Penn Interventional Radiology Animal Catheter Lab is parent organization of: Penn Mass Spectrometry Facility is parent organization of: University of Pennsylvania Molecular Profiling Facility Bioinformatics is parent organization of: Penn NBIC Probe Facility is parent organization of: Penn Neurobehavior Testing Core is parent organization of: Penn Next-Generation Sequencing Core is parent organization of: Penn Proteomics and Systems Biology Core is parent organization of: Penn Diabetes Research Center Radioimmunoassay and Biomarkers Core Facility is parent organization of: Penn Regional Nanotechnology Facility is parent organization of: Penn Small Animal Imaging Facility is parent organization of: Penn Small Animal Imaging Facility: MRI/MRS Sub-Core is parent organization of: Penn Small Animal Imaging Facility: Optical/Bioluminescence Sub-Core is parent organization of: Penn Small Animal Imaging Facility: Ultrasound Sub-Core is parent organization of: Pennsylvania University Perelman School of Medicine Stem Cell and Xenograft Core Facility is parent organization of: Penn Diabetes Research Center Transgenic and Chimeric Mouse Core Facility is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Vector Core Facility is parent organization of: Penn/CHOP CTRC Research Nurse Core is parent organization of: Penn/CHOP CTRC Sleep Core is parent organization of: Penn/CHOP CTRC Study Design and Biostatistics Core is parent organization of: Penn/CHOP CTRC Translational Core Laboratories is parent organization of: Penn/CHOP Office of Human Subject Recruitment and Protection is parent organization of: TESS: Transcription Element Search System is parent organization of: CoRAL - Classification of RNAs by Analysis of Length is parent organization of: University of Pennsylvania Labs and Facilities is parent organization of: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA is parent organization of: SBIA is parent organization of: TalkBank is parent organization of: IsoformEx is parent organization of: Neuron-C is parent organization of: GIMME is parent organization of: DTI-TK is parent organization of: Referral Center for Animal Models of Human Genetic Diseases is parent organization of: MAJIQ is parent organization of: ReBATE is parent organization of: PennAI is parent organization of: ITK-SNAP is parent organization of: Pharmacogenetics of Nicotine Addiction Treatment is parent organization of: 4D Genome is parent organization of: AsPredicted is parent organization of: HistoloZee is parent organization of: University of Pennsylvania School of Veterinary Medicine Center for Host Microbial Interactions Core Facility is parent organization of: University of Pennsylvania Electronic Phenotyping Resource Core Facility is parent organization of: University of Pennsylvania Penn Vet Imaging Core Facility is parent organization of: University of Pennsylvania School of Dental Medicine Tissue Processing Laboratory Core Facility is parent organization of: University of Pennsylvania Institute for RNA Innovation Engineered mRNA and Targeted Nanomedicine Core Facility is parent organization of: University of Pennsylvania Institute for Immunology and Immune Health I3H Core Facility is parent organization of: University of Pennsylvania Institute for RNA Innovation Targeting Core Facility is parent organization of: University of Pennsylvania Bollinger Digital Fabrication Laboratory Core Facility is parent organization of: University of Pennsylvania Perelman School of Medicine Clinical Research Collaboration Unit Core Facility has organization facet: C4R |
Wikidata:Q49117, SCR_022445, grid.25879.31, ISNI:0000 0004 1936 8972, nlx_24937, Crossref funder ID:100006920 | https://ror.org/00b30xv10 | SCR_004275 | University of Pennsylvania | 2026-08-15 11:22:45 | 11 | |||||||
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National Institute of Health and Medical Research; Rennes; France Resource Report Resource Website 10+ mentions |
National Institute of Health and Medical Research; Rennes; France (RRID:SCR_011404) | INSERM | institution | A public institution with a scientific and technical vocation under the dual auspices of the Ministry of Health and the Ministry of Research. It was created as a successor to the French National Institute of Health. INSERM consists of 339 research units, run by 6500 permanent staff members. Eighty percent of INSERM research units are embedded in research hospitals of French universities. |
is related to: PharmaCog is related to: International AMD Genetics Consortium is related to: EMIF is parent organization of: GermOnline is parent organization of: Inserm Transfert is parent organization of: AgedBrainSYSBIO is parent organization of: Human Splicing Finder is parent organization of: ClueGO is parent organization of: UMD-BRCA1/ BRCA2 databases is parent organization of: Orphanet is parent organization of: Gazel Database is parent organization of: ADJUST is parent organization of: Kidney and Urinary Pathway Knowledge Base is parent organization of: Cordelier Research Center |
Wikidata: Q1474517, nlx_88851, Crossref funder ID: 501100001677, ISNI: 121866389, grid.7429.8 | https://ror.org/02vjkv261 | SCR_011404 | Inserm | 2026-08-15 11:24:24 | 15 | ||||||||
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University of Washington; Seattle; USA Resource Report Resource Website 10+ mentions |
University of Washington; Seattle; USA (RRID:SCR_011749) | UW | university | University of Washington is public research university in Seattle, Washington. Has university campuses in Seattle, Tacoma and Bothell, academic medical center and professional and continuing education programs. | public, research, university, campus, medical, center |
uses: ReadCube uses: Scizzle is affiliated with: Diabetes Research Centers is related to: Kidney Health Initiative is related to: Alzheimers Disease Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: nbdocker is related to: Trail Technical Report Archive is related to: Urinary Stone Disease Research Network is related to: Seattle Alzheimer Disease Brain Cell Atlas is parent organization of: UW Department of Biochemistry is parent organization of: University of Washington Nath Research Group is parent organization of: CorQ is parent organization of: Maitreya Dunham's Lab is parent organization of: National ESCA and Surface Analysis Center for Biomedical Problems is parent organization of: Neurological Disorder Resources is parent organization of: BEAGLE is parent organization of: PolyPhred is parent organization of: Aging Genes and Interventions Database is parent organization of: Washington National Primate Research Center is parent organization of: Macaque.org is parent organization of: Primate Resource Referral Service is parent organization of: COnsensus-DEgenerate Hybride Oligonucleotide Primers is parent organization of: MindSeer is parent organization of: BrainInfo is parent organization of: FMA is parent organization of: Solstice is parent organization of: Foldit is parent organization of: Segway - a way to segment the genome is parent organization of: svmvia is parent organization of: qvality - Nonparametric estimation of posterior error probabilities is parent organization of: Charge Czar: Peptide charge state determination for low-resolution tandem mass spectra is parent organization of: BiblioSpec is parent organization of: Segtools is parent organization of: Genomedata is parent organization of: Language Map Experiment Management System is parent organization of: Philius is parent organization of: Patient-Reported Outcomes Measurement Information System is parent organization of: hyfi: software suite for binding site search is parent organization of: Percolator: Semi-supervised learning for peptide identification from shotgun proteomics datasets is parent organization of: Consed is parent organization of: PHYLIP is parent organization of: Metabolism and Transport Drug Interaction Database is parent organization of: SVM-fold: Protein Fold Prediction is parent organization of: MORGAN is parent organization of: Digital Anatomist Interactive Atlases Project is parent organization of: Rankprop - Protein Ranking by Network Propagation is parent organization of: Noble Research Lab is parent organization of: A statistical framework for genomic data fusion is parent organization of: National Alzheimer's Coordinating Center is parent organization of: NSR Physiome Project is parent organization of: University of Washington Seattle WA. Pharmacology is parent organization of: Decoys-R-Us is parent organization of: MPIM - Mitochondrial Protein Import Machinery is parent organization of: Yeast Resource Center is parent organization of: Foundational Model Explorer is parent organization of: Alcohol and Drug Abuse Institute, University of Washington is parent organization of: Eric H. Chundlers Links is parent organization of: UW Genome Sciences is parent organization of: LAMHDI: The Initiative to Link Animal Models to Human DIsease is parent organization of: University of Washington Alzheimers Disease Research Center is parent organization of: Sageweb is parent organization of: Laboratory of Phil Green at Univeristy of Washington is parent organization of: Genome Institue at Washington University is parent organization of: Crux tandem mass spectrometry analysis software is parent organization of: HMMSeg is parent organization of: GeneTests is parent organization of: Phylogeny Programs is parent organization of: NHLBI Grand Opportunity Exome Sequencing Project is parent organization of: NHLBI Exome Sequencing Project (ESP) is parent organization of: Francisella tularensis Genome Research is parent organization of: Alcohol and Drug Abuse Institute (ADAI) Library: Alcohol, Drugs and Tobacco Web Links is parent organization of: L2L Microarray Analysis Tool is parent organization of: CELL- PREVEN Project is parent organization of: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer is parent organization of: MIPgen is parent organization of: i2b2 Cross-Institutional Clinical Translational Research project is parent organization of: ACTTION is parent organization of: GeneReviews is parent organization of: Aging Dementia and Traumatic Brain Injury Study is parent organization of: iModel is parent organization of: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility is parent organization of: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is parent organization of: University of Washington Diabetes Research Center Cell Function Analysis Core Facility is parent organization of: University of Washington Diabetes Research Center Human Studies Core Facility is parent organization of: University of Washington Diabetes Research Center is parent organization of: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core is parent organization of: University of Washington Diabetes Research Center Administrative Core is parent organization of: University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core is parent organization of: University of Washington Nutrition and Obesity Research Center is parent organization of: University of Washington Nutrition and Obesity Research Center Administrative and Enrichment Core is parent organization of: University of Washington Nutrition and Obesity Research Center Analytic Core is parent organization of: University of Washington Nutrition and Obesity Research Center Energy Balance Core is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core is parent organization of: Cystic Fibrosis Center - University of Washington is parent organization of: Science Dynamics is parent organization of: Shannon is parent organization of: Skyline is parent organization of: PanoramaWeb is parent organization of: SBFSEM-tools is parent organization of: TopHat is parent organization of: Combined Annotation Dependent Depletion is parent organization of: SuperSegger is parent organization of: Monocle3 is parent organization of: Robetta is parent organization of: Mozak is parent organization of: Protein Cross-Linking Database is parent organization of: Kojak is parent organization of: Simple Behavior Analysis project is parent organization of: ACRoBaT is parent organization of: University of Washington I-LABS MEG Brain Imaging Center Core Facility is parent organization of: University of Washington Transgenic Resources Program Core Facility is parent organization of: University of Washington Mouse CRISPR Core Facility is parent organization of: University of Washington Translational BioImaging Core Facility is parent organization of: University of Washington Northwest Metabolomics Research Center Core Facility is parent organization of: University of Washington Histology and Imaging Core Facility is parent organization of: University of Washington Gnotobiotic Animal Core Facility is parent organization of: University of Washington In Vivo Services (IVS) Core Facility is parent organization of: University of Washington Histology and Imaging Core Facility |
Wikidata:Q219563, nlx_67476, ISNI:122986657, Crossref funder ID:100007812, grid.34477.33 | https://ror.org/00cvxb145 | SCR_011749 | The University of Washington, University of Washington | 2026-08-15 11:24:37 | 15 | |||||||
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Gene Ontology Resource Report Resource Website 10000+ mentions |
Gene Ontology (RRID:SCR_002811) | GO | data or information resource, project portal, organization portal, knowledge environment resource, consortium, portal | Computable knowledge regarding functions of genes and gene products. GO resources include biomedical ontologies that cover molecular domains of all life forms as well as extensive compilations of gene product annotations to these ontologies that provide largely species-neutral, comprehensive statements about what gene products do. Used to standardize representation of gene and gene product attributes across species and databases. | gene, product, annotation, molecular, function, cellular, biological, role, database, query, obo, gold standard, bio.tools, FASEB list |
is used by: NIF Data Federation is used by: GreenPhylDB is used by: LIPID MAPS Proteome Database is used by: Aging Portal is used by: ChannelPedia is used by: Open PHACTS is used by: CoPub is used by: PhenoGO is used by: Database for Annotation Visualization and Integrated Discovery is used by: MitoMiner is used by: dcGO is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition is used by: barleyGO is used by: SynGO is used by: Functional Annotation is used by: SwissLipids is listed by: BioPortal is listed by: OBO is listed by: OMICtools is listed by: bio.tools is listed by: Debian is affiliated with: Mouse Genome Informatics: The Gene Ontology Project is related to: GenNav is related to: SynaptomeDB is related to: High-Throughput GoMiner is related to: Onto-Design is related to: OnEx - Ontology Evolution Explorer is related to: Avadis is related to: GONUTS is related to: PiNGO is related to: Automated Microarray Pipeline is related to: categoryCompare is related to: globaltest is related to: Semantic Measures Library is related to: WegoLoc is related to: AnimalTFDB is related to: MEME Suite - Motif-based sequence analysis tools is related to: Arabidopsis Hormone Database is related to: DAVID is related to: Arabidopsis thaliana Protein Interactome Database is related to: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer is related to: pSTIING is related to: GoMiner is related to: FunSimMat is related to: GeneSpeed- A Database of Unigene Domain Organization is related to: Centre for Modeling Human Disease Gene Trap Resource is related to: Patterns of Gene Expression in Drosophila Embryogenesis is related to: Babelomics is related to: BioPerl is related to: GeneCruiser is related to: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool is related to: GOToolBox Functional Investigation of Gene Datasets is related to: Cotton EST Database is related to: MouseNET is related to: PLANTTFDB is related to: T-profiler is related to: Physico-Chemical Process is related to: Integrated Molecular Interaction Database is related to: SEGS is related to: GOCat is related to: Quantitative Enrichment of Sequence Tags is related to: Neural-Immune Gene Ontology is related to: INMEX is related to: StRAnGER is related to: QuickGO is related to: Repository of molecular brain neoplasia data is related to: Cardiovascular Gene Ontology Annotation Initiative is related to: PANTHER is related to: Short Time-series Expression Miner (STEM) is related to: DATFAP is related to: GORetriever is related to: Gene Ontology Browsing Utility (GOBU) is related to: GeneTools is related to: GOSlimViewer is related to: go-moose is related to: Network Ontology Analysis is related to: Onto-Compare is related to: Onto-Express is related to: OntoVisT is related to: STRAP is related to: CGAP GO Browser is related to: COBrA is related to: Gene Class Expression is related to: GeneInfoViz is related to: GOfetcher is related to: GoFish is related to: GOProfiler is related to: GOanna is related to: Manatee is related to: Pandora - Protein ANnotation Diagram ORiented Analysis is related to: TAIR Keyword Browser is related to: Wandora is related to: GOTaxExplorer is related to: Onto-Miner is related to: Onto-Translate is related to: ToppGene Suite is related to: DBD - Slim Gene Ontology is related to: ONTO-PERL is related to: Blip: Biomedical Logic Programming is related to: OWL API is related to: CLENCH is related to: BiNGO: A Biological Networks Gene Ontology tool is related to: CateGOrizer is related to: FuSSiMeG: Functional Semantic Similarity Measure between Gene-Products is related to: ProteInOn is related to: GeneMerge is related to: GraphWeb is related to: ClueGO is related to: CLASSIFI - Cluster Assignment for Biological Inference is related to: GOHyperGAll is related to: FuncAssociate: The Gene Set Functionator is related to: GOdist is related to: FuncExpression is related to: FunCluster is related to: FIVA - Functional Information Viewer and Analyzer is related to: GARBAN is related to: GOEx - Gene Ontology Explorer is related to: SGD Gene Ontology Slim Mapper is related to: GOArray is related to: SNPsandGO is related to: GoSurfer is related to: GOtcha is related to: MAPPFinder is related to: GoAnnotator is related to: MetaGeneProfiler is related to: OntoGate is related to: ProfCom - Profiling of complex functionality is related to: SerbGO is related to: SOURCE is related to: Ontologizer is related to: THEA - Tools for High-throughput Experiments Analysis is related to: Generic GO Term Mapper is related to: GREAT: Genomic Regions Enrichment of Annotations Tool is related to: GoBean - a Java application for Gene Ontology enrichment analysis is related to: TXTGate is related to: GO-Module is related to: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures is related to: G-SESAME - Gene Semantic Similarity Analysis and Measurement Tools is related to: MalaCards is related to: FSST - Functional Similarity Search Tool is related to: Expression Profiler is related to: GOChase is related to: GoPubMed is related to: Whatizit is related to: REViGO is related to: WEGO - Web Gene Ontology Annotation Plot is related to: Blast2GO is related to: InterProScan is related to: PubSearch is related to: TrED is related to: CharProtDB: Characterized Protein Database is related to: VirHostNet: Virus-Host Network is related to: Pathbase is related to: GO Online SQL Environment (GOOSE) is related to: Neurobehavior Ontology is related to: InterSpecies Analysing Application using Containers is related to: KOBAS is related to: ConceptWiki is related to: GeneTerm Linker is related to: Bioconductor is related to: ErmineJ is related to: Gene Ontology For Functional Analysis (GOFFA) is related to: MGI GO Browser is related to: Comparative Toxicogenomics Database (CTD) is related to: GOEAST - Gene Ontology Enrichment Analysis Software Toolkit is related to: Ontology Lookup Service is related to: LexGrid is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit is related to: g:Profiler is related to: OwlSim is related to: GOrilla: Gene Ontology Enrichment Analysis and Visualization Tool is related to: YeTFaSCo is related to: FastSemSim is related to: RamiGO is related to: AutismKB is related to: GeneCodis is related to: FunSpec is related to: FunNet - Transcriptional Networks Analysis is related to: PhenoM - Phenomics of yeast Mutants is related to: agriGO is related to: GOblet is related to: DynGO is related to: SeqExpress is related to: ProbeExplorer is related to: ECgene: Gene Modeling with Alternative Splicing is related to: Organelle DB is related to: Gemma is related to: Candidate Genes to Inherited Diseases is related to: Proteome Analyst PA-GOSUB is related to: Network Analysis, Visualization and Graphing TORonto is related to: GOstat is related to: Onto-Express To Go (OE2GO) is related to: Tk-GO is related to: EGAN: Exploratory Gene Association Networks is related to: Spotfire is related to: GOMO - Gene Ontology for Motifs is related to: GFINDer: Genome Function INtegrated Discoverer is related to: Generic GO Term Finder is related to: Agile Protein Interactomes DataServer is related to: AgingDB is related to: UBERON is related to: Algal Functional Annotation Tool is related to: gsGator is related to: Flash Gviewer is related to: Cerebellar Development Transcriptome Database is related to: PlantNATsDB - Plant Natural Antisense Transcripts DataBase is related to: EASE: the Expression Analysis Systematic Explorer is related to: PiGenome is related to: L2L Microarray Analysis Tool is related to: MeGO is related to: CELDA Ontology is related to: Diabetes Disease Portal is related to: MatrixDB is related to: Kidney and Urinary Pathway Knowledge Base is related to: MouseCyc is related to: Candida Genome Database is related to: Honey Bee Brain EST Project is related to: ECO is related to: FlyMine is related to: Gramene is related to: 3D-Interologs is related to: Biomine is related to: UniProtKB is related to: NCBI BioSystems Database is related to: EBIMed is related to: Coremine Medical is related to: EMAGE Gene Expression Database is related to: GeneMANIA is related to: Yeast Search for Transcriptional Regulators And Consensus Tracking is related to: GeneTrail is related to: Magic is related to: Mouse Genome Informatics (MGI) is related to: FlyBase is related to: InterPro is related to: InnateDB is related to: canSAR is related to: HPRD - Human Protein Reference Database is related to: CRCView is related to: Integrated Manually Extracted Annotation is related to: LegumeIP is related to: Renal Disease Portal is related to: PhenoGO is related to: DOAF is related to: OBO is related to: biomaRt is related to: OncoboxPD is parent organization of: AmiGO is parent organization of: GOlr is parent organization of: RefGenome is parent organization of: OBO-Edit is parent organization of: OWLTools is parent organization of: Gene Ontology Tools is parent organization of: Gene Ontology Extension is parent organization of: SO is parent organization of: go-db-perl is parent organization of: go-perl works with: topGO works with: DIANA-mirPath works with: GOnet is organization facet of: Alliance of Genome Resources |
European Union QLRI-CT-2001-0098; European Union QLRI-CT-2001-00015; NHGRI P41 HG002273 |
PMID:23161678 PMID:10802651 |
Free, Freely available, Available for download | biotools:go, OMICS_02278, nif-0000-02915 | http://bioportal.bioontology.org/ontologies/GO, https://bio.tools/go | SCR_002811 | the Gene Ontology, GO, Gene Ontology Resource, Gene Ontology | 2026-08-17 09:31:51 | 12993 | ||||
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KEGG Resource Report Resource Website 10000+ mentions |
KEGG (RRID:SCR_012773) | KEGG | production service resource, service resource, data analysis service, data or information resource, database, topical portal, analysis service resource, data access protocol, software resource, portal, web service | Integrated database resource consisting of 16 main databases, broadly categorized into systems information, genomic information, and chemical information. In particular, gene catalogs in completely sequenced genomes are linked to higher-level systemic functions of cell, organism, and ecosystem. Analysis tools are also available. KEGG may be used as reference knowledge base for biological interpretation of large-scale datasets generated by sequencing and other high-throughput experimental technologies. | model, pathway, functional hierarchy, module, cancer, disease, drug, drug classification, orthology, ortholog, genome, gene, protein, compound, classification, biochemical reaction, pathway, ligand, biosynthesis, pathway prediction, sequence, chemical structure, human, enzyme, database, molecular interaction, metabolism, metabolomics, cellular process, structure, drug development, reaction, cell |
is used by: NIF Data Federation is used by: Arabidopsis Reactome is used by: LIPID MAPS Proteome Database is used by: globaltest is used by: MitoMiner is used by: Database for Annotation Visualization and Integrated Discovery is used by: Biochemical Pathways Reaction Kinetics Database is used by: Ultimate Rough Aggregation of Metabolic Map is used by: GEMINI is used by: In vivo - In silico Metabolite Database is listed by: 3DVC is listed by: OMICtools is affiliated with: Kyoto Encyclopedia of Genes and Genomes Expression Database is related to: PathCase Pathways Database System is related to: ExplorEnz is related to: NCBI BioSystems Database is related to: Allen Institute Neurowiki is related to: eQuilibrator is related to: GeneTrail is related to: KegTools is related to: PRODORIC is related to: hiPathDB - human integrated Pathway DB with facile visualization is related to: METLIN is related to: Kidney and Urinary Pathway Knowledge Base is related to: DAVID is related to: ConsensusPathDB is related to: ENZYME is related to: FlyMine is related to: Babelomics is related to: SynSysNet is related to: Cotton EST Database is related to: Integrated Molecular Interaction Database is related to: SEGS is related to: INMEX is related to: BioExtract is related to: ClueGO is related to: MalaCards is related to: TrED is related to: FunTree is related to: MOPED - Model Organism Protein Expression Database is related to: ProOpDB is related to: KOBAS is related to: GeneTerm Linker is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit is related to: GeneCodis is related to: FunNet - Transcriptional Networks Analysis is related to: LegumeIP is related to: Algal Functional Annotation Tool is related to: aGEM is related to: DINIES is related to: KEGG PATHWAY Database is related to: ShinyGO is related to: KEGGREST has parent organization: Kyoto University; Kyoto; Japan has parent organization: University of Tokyo; Tokyo; Japan is parent organization of: KegTools works with: DIANA-mirPath works with: MiMeDB |
Japanese Ministry of Education Culture Sports Science and Technology MEXT ; Japan Science and Technology Agency |
PMID:22700311 PMID:22130871 PMID:22080510 PMID:19880382 PMID:19172790 PMID:18428742 PMID:18287706 PMID:18077471 PMID:16381885 PMID:16014746 PMID:14681412 PMID:12539951 PMID:11752249 PMID:10928937 PMID:10592173 PMID:9847135 |
Restricted | nlx_31015, OMICS_01583, OMICS_03010, OMICS_01582, OMICS_03974, OMICS_05434, OMICS_05360 | http://www.genome.jp/kegg/ | SCR_012773 | KEGG - Kyoto Encyclopedia of Genes and Genomes, Kyoto Encyclopedia of Genes and Genomes | 2026-08-17 09:34:36 | 81488 | ||||
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University of Minnesota Medical School; Minnesota; USA Resource Report Resource Website |
University of Minnesota Medical School; Minnesota; USA (RRID:SCR_011673) | university | Medical school of the University of Minnesota. It is a combination of two campuses situated in Minneapolis and Duluth, Minnesota. The University of Minnesota Medical School is also part of one of the largest Academic Health Centers in the United States. |
is related to: Prevention of Lower Urinary Tract Symptoms has parent organization: University of Minnesota Twin Cities; Minnesota; USA is parent organization of: Minnesota Liver Tissue Cell Distribution System |
ISNI:0000 0004 0367 6196, nlx_143726, grid.471402.4, Wikidata:Q7895802 | https://ror.org/04jnprq39 | SCR_011673 | University of Minnesota Medical School | 2026-08-15 11:24:20 | 0 | |||||||||
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Duke University School of Medicine; North Carolina; USA Resource Report Resource Website 1+ mentions |
Duke University School of Medicine; North Carolina; USA (RRID:SCR_011194) | Duke SOM | institution, university | Center for medical education, clinical care and biomedical research. Medical education includes programs that train medical students, residents and fellows, research scientists and post-doctoral fellows, physical therapists, physician assistants and pathologist assistants. |
is related to: Kidney Health Initiative is related to: Biospecimen Repository and Processing Core is related to: Urinary Stone Disease Research Network has parent organization: Duke University; North Carolina; USA is parent organization of: TADS - Treatment for Adolescents with Depression Study is parent organization of: SVA is parent organization of: Duke Cancer Institute is parent organization of: Joseph and Kathleen Bryan Alzheimer's Disease Research Center is parent organization of: Songbird Brain Transcriptome Database is parent organization of: Piedmont Health Survey of the Elderly is parent organization of: Duke O'Brien Center for Kidney Research Clinical and Translational Core is parent organization of: Duke O'Brien Center for Kidney Research Renal Genomics Core is parent organization of: Duke O'Brien Center for Kidney Research is parent organization of: Duke O'Brien Center for Kidney Research Animal Models Core |
nlx_143696 | SCR_011194 | Duke School of Medicine, Duke University School of Medicine | 2026-08-15 11:31:14 | 1 | |||||||||
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University of Texas System; Texas; USA Resource Report Resource Website 1+ mentions |
University of Texas System; Texas; USA (RRID:SCR_011715) | UT System | university | Public university system in Texas, established by the Texas Constitution in 1876, comprising nine academic and six health institutions. |
is related to: Urinary Stone Disease Research Network is parent organization of: University of Texas at Dallas; Texas; USA is parent organization of: National Resource Center for Cephalopods is parent organization of: University of Texas at Austin; Texas; USA is parent organization of: Simulator for Neural Networks and Action Potentials is parent organization of: University of Texas M. D. Anderson Cancer Center is parent organization of: Retinal Information Network is parent organization of: SDAP: Structural Database of Allergenic Proteins is parent organization of: University of Texas Medical Branch at Galveston Next Generation Sequencing Core Facility is parent organization of: University of Texas MD Anderson Cytogenetics and Cell Authentication Core Facility is parent organization of: University of Texas MD Anderson Advanced Technology Genomics Core Facility is parent organization of: University of Texas MD Anderson Cancer Genomics Library Core Facility is parent organization of: University of Texas Institute for Personalized Cancer Therapy Cancer Genomics Laboratory Core Facility is parent organization of: University of Texas Medical Branch Flow Cytometry and Cell Sorting Core Facility |
Wikidata:Q2140391, nlx_61301, Crossref funder ID:100007130, ISNI:121548364, grid.55460.32, nlx_152527, SCR_011725 | https://ror.org/01gek1696 | SCR_011715 | University of Texas; Texas; USA | 2026-08-17 09:34:17 | 1 |
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