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IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures (RRID:SCR_005815)Copy Citation Copied
URL: http://web.cbio.uct.ac.za/ITGOM/
Proper Citation: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures (RRID:SCR_005815)
Description: The Integrated Tool for IC-based GO Semantic Similarity Measures (IT-GOM) integrates the currently known GO semantic similarity measures into a single tool. It provides the information content (IC) of GO terms, semantic similarity between GO terms and GO-based protein functional similarity scores. The specificity of GO terms and the similarity of biological content between GO terms or proteins are transformed into numeric values for protein analyses at the functional level. The integration of the different measures enables users to choose the measure best suited to their application and to compare results between different semantic similarity measures. Platform: Online tool
Abbreviations: IT-GOM
Synonyms: Integrated Tool for IC-based GO Semantic Similarity Measures (IT-GOM), Integrated Tool for IC-based GO Semantic Similarity Measures
Resource Type: analysis service resource, data analysis service, production service resource, service resource
Keywords: semantic similarity, gene ontology, protein, functional similarity, function, annotation, topology
Funding: National Bioinformatics Network in South Africa ; University of Cape Town; Western Cape; South Africa ; Computational Biology research group at the Institute of Infectious Disease and Molecular Medicine
Availability: Open unspecified license - Free for academic use
Resource Name: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures
Resource ID: SCR_005815
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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