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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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Zebrafish Neuroscience Research Consortium Resource Report Resource Website |
Zebrafish Neuroscience Research Consortium (RRID:SCR_000298) | ZNRC | group, training resource | A group of scientists who collaborate and promote zebrafish neuroscience research. The consortium has opportunities for networking, scholarly publications and zebrafish-related symposia and conferences. The consortium is a supporter of the Zebrafish Neurophenome Project (ZNP), an initiative for a database of zebrafish behavioral and physiological data in an online, open source format. | zebrafish, consortium, research, publication, scholar, neuroscience, behavioral activity | is parent organization of: Zebrafish Neurophenome Project Database | Available to the research community, Interested labs may join | nlx_151974 | SCR_000298 | SciCrunch Registry | Zebrafish Neuroscience Research Consortium (ZNRC) | 2026-10-24 12:52:01 | 0 | |||||||
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GlimmerHMM Resource Report Resource Website 500+ mentions |
GlimmerHMM (RRID:SCR_002654) | GlimmerHMM | software resource, source code | A gene finder based on a Generalized Hidden Markov Model (GHMM). Although the gene finder conforms to the overall mathematical framework of a GHMM, additionally it incorporates splice site models adapted from the GeneSplicer program and a decision tree adapted from GlimmerM. It also utilizes Interpolated Markov Models for the coding and noncoding models . Currently, GlimmerHMM's GHMM structure includes introns of each phase, intergenic regions, and four types of exons (initial, internal, final, and single). | gene, hidden markov model |
is related to: Glimmer has parent organization: Johns Hopkins University; Maryland; USA |
NIH ; NLM R01-LM06845; NLM R01-LM007938 |
PMID:15145805 | Free, Available for download, Freely available | nlx_156092 | SCR_002654 | SciCrunch Registry | GlimmerHMM - Eukaryotic Gene-Finding System | 2026-10-24 12:52:05 | 643 | |||||
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One Mind Biospecimen Bank Listing Resource Report Resource Website |
One Mind Biospecimen Bank Listing (RRID:SCR_004193) | One Mind Biobanks, One Mind Biobank | biomaterial supply resource, cell repository, material resource | International registry of biomaterial supply resources both for transplantation and research. Contributions to this resource are welcome. The database is searchable through NIF and is updated regularly. | biorepository, bio-repository, database, registry, biobank, biospecimen, repository |
is used by: NIF Data Federation is used by: Aging Portal lists: Midwest Transplant Network lists: Danish Multiple Sclerosis Biobank lists: Genetics of Kidneys in Diabetes lists: TEDDY lists: BioEden Tooth Cell Bank lists: Windber Tissue Bank lists: Boston University Alzheimer's Disease Center Neuropathology Core Facility lists: UCL Biobank lists: LifeLegacy Foundation lists: CCLG Tissue Bank lists: ADA GENNID Study lists: Ohio State Leukemia Tissue Bank lists: Feinstein Biorepository lists: Iowa Donor Network lists: National Disease Research Interchange lists: Emory ADRC Tissue and Biospecimen Banking Facility lists: Zebrafish Brain Atlas lists: KI Biobank - Amphetamine dependence lists: KI Biobank - PAIN lists: PRACSIS - Prognosis and Risk in Acute Coronary Syndromes In Sweden lists: Africa Centre Biobank lists: UCSF Brain Tumor Tissue Bank lists: Southampton Tumour Bank lists: California National Primate Research Center Analytical and Resource Core lists: CPCTR: Cooperative Prostate Cancer Tissue Resource lists: DIAN - Dominantly Inherited Alzheimer Network lists: ZCre lists: Mexican Health and Aging Study lists: NIDDK Inflammatory Bowel Disease Genetics Consortium lists: Acute Liver Failure Study Group lists: Diabetes Prevention Type 1 lists: NIA Mouse cDNA Project Home Page lists: Type 1 Diabetes Resource lists: BARI 2D lists: Childhood Liver Disease Research and Education Network lists: EuMMCR lists: Living Biobank lists: Nonalcoholic Steatohepatitis Clinical Research Network lists: Drug-Induced Liver Injury Network lists: HALT-C Trial lists: SEARCH for Diabetes in Youth lists: Viral Resistance to Antiviral Therapy of Chronic Hepatitis C lists: GenitoUrinary Development Molecular Anatomy Project lists: Medical Therapy of Prostatic Symptoms lists: Type 1 Diabetes Genetics Consortium lists: Texas A and M Institute for Genomic Medicine lists: Expression Patterns for C. elegans promoter GFP fusions lists: ATCC lists: Genes to Cognition - Biological Resources lists: TCAG lists: World Federation for Culture Collections lists: Italian Rett Syndrome database lists: Addgene lists: Rat Resource and Research Center lists: National Center for Marine Algae and Microbiota lists: UD Chick EST Project lists: NCI Mouse Repository lists: CGSC lists: International Gene Trap Consortium lists: Honey Bee Brain EST Project lists: Marine Biological Laboratory lists: NBRC lists: FANTOM DB lists: UMMC Center for Psychiatric Neuroscience Labs and Facilities lists: Gene Expression Nervous System Atlas lists: Washington National Primate Research Center lists: Primate Embryo Gene Expression Resource lists: Peromyscus Genetic Stock Center lists: Islet Cell Resource Centers lists: National Natural Toxins Research Center lists: GenomEUtwin lists: Drosophila Genomics Resource Center lists: Human Tissue and Organ for Research Resource (HTORR) lists: Special Mouse Strains Resource lists: New England National Primate Research Center lists: Addiction Research GPCR Assay Bank lists: Mutant Mouse Resource and Research Center lists: Penn Induced Pluripotent Stem Cell Core Facility lists: neuromice lists: EUROpean Saccharomyces Cerevisiae ARchive for Functional Analysis lists: ShARM lists: NIH NeuroBioBank lists: NIH Human Pluripotent Stem Cell Registry lists: Phoenix lists: The Cancer Genome Atlas lists: MUGEN Mouse Database lists: Coriell Cell Repositories lists: RIKEN BioResource Center lists: Pleiades Promoter Project: Genomic Resources Advancing Therapies for Brain Disorders lists: Retinal Degeneration Rat Model Resource lists: Harvard Brain Tissue Resource Center lists: Glioma Molecular Dignostic Initiatives lists: Source BioScience LifeSciences lists: National Mesothelioma Virtual Bank lists: SpecimenCentral.com lists: Arizona Cancer Center Tumor Bank lists: Cryogenic Laboratories, Inc lists: Partners HealthCare Biorepository lists: National Neurological AIDS Bank lists: Mount Sinai Allograft Technologies lists: EuroBioBank lists: NICHD Brain and Tissue Bank for Developmental Disorders lists: Roswell Park Data Bank and BioRepository lists: Hungarian Neurological-Psychiatric Biobank lists: Roslin Cells lists: Vitiligo Biobank lists: NAF Ataxia Tissue Donation lists: HipSci lists: Cellartis lists: KaLy-Cell lists: Lions Eye Institute for Transplant and Research lists: Endocells lists: Leibniz Institute for Prevention Research and Epidemiology Biobank lists: DCI Tissue and Blood Procurement Shared Resource lists: Childhood Leukaemia Cell Bank lists: Cleveland Clinic Genomic Medicine Biorepository lists: Sunnybrook Tumour Bank lists: Massachusetts Human Stem Cell Bank lists: Liverpool Tissue Bank lists: Dr. Donald MacLellan Tissue Bank lists: OneLegacy lists: Arizona Biospecimen Locator lists: ProMPT - Prostate Cancer Mechanisms of Progression and Treatment lists: British Columbia Gynaecologic Tissue Bank lists: Guthy-Jackson Repository for Neuromyelitis Optica lists: Biorepository Alliance of Georgia for Oncology lists: ITOR Biorepository Services lists: Canadian Tumour Repository Network lists: Progeria Cell and Tissue Bank lists: Wright Medical Technology, Inc. lists: Accelerated Cure Project MS Repository lists: Integrated Biobank of Luxembourg lists: International Biologics, LLC lists: Canadian Breast Cancer Foundation Tumor Bank lists: AIDS and Cancer Specimen Resource lists: Canadian Virtual Brain Tumour Bank lists: UAB Comprehensive Cancer Center Tissue Procurement Shared Facility lists: Cancer Research Network of the FRSQ lists: Biobanking and Biomolecular Resources Research Infrastructure (BBMRI) lists: Bangalore Brain Bank lists: Roslin Wellcome Trust Tick Cell Biobank lists: Osiris Therapeutics lists: LifePoint, Inc. lists: American Donor Services lists: Life Alaska Donor Services, Inc. lists: Biobank Graz lists: UCSF DNA Bank lists: Store-a-Tooth Stem Cell Bank lists: UC San Diego Biorepository lists: START Tumor Bank lists: Donor Alliance lists: University of Minnesota Tissue Procurement Facility lists: NEALS Sample Repository lists: South Texas Blood and Tissue Center lists: New Life Generation, Inc. lists: Transplant Services Center lists: Nevada Donor Network, Inc. lists: OECI - Tubafrost: The European Human Frozen Tissue Bank lists: Cincinnati Biobank Core Facility lists: OHSU Biolibrary lists: Ochsner Blood Bank lists: Brown University Rhode Island Biobank Core Facility lists: Myeloma Tissue Bank lists: US Biomax lists: LifeShare Transplant lists: BioStorage Technologies lists: Duke Biobank lists: UAB Alzheimer's Disease Center lists: Duke Biospecimen Repository lists: Center for Organ Recovery and Education - CORE lists: ReproTech, Ltd. lists: Ludwig Boltzman Tumour Bank lists: Lifesharing Tissue Services lists: Donor Network of Arizona lists: Wales Cancer Bank lists: M2Gen Biorepository lists: Medical College of Georgia Tumor Bank lists: Cellular Technology Ltd Cryopreserved PBMC lists: onCore UK lists: Doheny Eye and Tissue Transplant Bank lists: Dana Farber Tissue Bank lists: Karolisnka Biobank lists: Rocky Mountain MS Center Tissue Bank lists: Marshfield Clinic Biobank lists: Mantle Cell Lymphoma Cell Bank lists: Neuroendocrine Tumors Biobank lists: Case Comprehensive Cancer Center Biorepository and Tissue Processing Core Facility lists: Maryland Brain Collection lists: Angioma Alliance DNA/Tissue Bank and Patient Registry lists: Wisconsin International Stem Cell Bank lists: Mid-America Transplant Services lists: Autism Genetic Resource Exchange lists: Moffitt Cancer Center Tissue Core lists: PROCURE Quebec Prostate Cancer Biobank lists: AIDS Malignancy Bank lists: University of Chicago Human Tissue Resource Center Biospecimen Banking lists: UAB SPORE Biorepository Banks lists: Bone Bank Allografts lists: Allograft Innovations, LLC lists: Origene China lists: Louisiana Organ Procurement Agency - LOPA lists: EDAR study: biomarkers for Alzheimer's disease lists: Cooperative Human Tissue Network lists: UMass Cancer Center Tissue and Tumor Bank lists: Crimson Biospecimen Core lists: ScienceCare lists: St. James Hospital Cryobiology Laboratory Stem Cell Facility lists: BrainNet Europe lists: Essential Tremor Centralized Brain Repository lists: South Dakota Lions Eye Bank lists: Estonian Genome Center lists: Cureline Biopathology lists: Stem-Health Hellas Stem Cell Bank lists: LifeTek OrthoBiologics lists: TissueNet lists: Swedish Regional Biobank lists: Cryo-Save lists: National Surgical Adjuvant Breast and Bowel Project Tissue Bank lists: University of Virginia Tissue Culture Facility lists: KORA-gen lists: Swiss Biobank lists: NIGMS Human Genetic Cell Repository lists: NINDS Repository lists: eyeGENE lists: NHGRI Sample Repository for Human Genetic Research lists: Biobank of Hospital Clinic - IDIBAPS lists: Regional Biobank of Central Norway lists: SeraCare Lifesciences: Sample Storage Management and Processing Services lists: NEI-AREDS Genetic Repository lists: COHORT Repository lists: JP McCarthy Cord Stem Cell Bank lists: Michigan Neonatal Biobank lists: SepNet Central Sample Bank lists: LifeLink Tissue Bank lists: SPH Biorepository lists: Cardio-Facio-Cutaneous Syndrome International Biobank lists: DCI Donor Services lists: LifeGift Organ Donation Center lists: Inflammatory Breast Cancer Biobank lists: University of Miami Tissue Bank lists: LifeNet Health of Florida lists: UTHealth BioBank lists: Southwest France Tumour Bank lists: Southern Alberta Organ and Tissue Donation Program lists: Blood and Tissue Center of Central Texas lists: MD Anderson Clone Bank lists: Community Tissue Services - CTS lists: Aurora Healthcare Biorepository lists: Human Biological Data Interchange lists: Bio-Options lists: Cancer Center Tissue Bank - Fudan University lists: British Columbia Tumour Tissue Repository lists: BioReliance Biorepository lists: New York Firefighters Skin Bank lists: GSDS - Golden State Donor Services lists: UK Multiple Sclerosis Tissue Bank lists: UCL/UCLH Biobank for Studying Health and Disease lists: Tumorbank Bern lists: IPBIR - Integrated Primate Biomaterials and Information Resource lists: Stanford Tissue Bank lists: HD Community BioRepository lists: Autism Research Resource lists: Yerkes Collection Non-Human Primate Resource lists: Hollings Cancer Center Tissue Biorepository and Research Pathology Services Shared Resource lists: Washington Regional Transplant Community - WRTC lists: Vanderbilt BioVU lists: Jackson Laboratory lists: Central England Haemato-Oncology Research Biobank lists: Genethon DNA and Cell Bank lists: University of Michigan Biorepository lists: Simons Simplex Collection lists: Gift of Life Donor Program lists: Queen Square Brain Bank lists: SeqWright Biorepository lists: Telethon Network of Genetic Biobanks lists: New York Organ Donor Network - NYODN lists: Wistar Institute Collection at Coriell lists: USIDNET DNA and Cell Repository lists: Brain Bank for Autism lists: Living Legacy Foundation of Maryland lists: Beaumont Hospitals Biobank lists: Central Biomaterial Bank - German Heart Failure Network lists: PXE International Registry and BioBank lists: Southeast Tissue Alliance, Inc. - SETA lists: National Biobank of Finland lists: CDC Cell and DNA Repository lists: ILSbio lists: California Cryobank, Inc. lists: ETEX Corporation lists: Leiomyosarcoma Cell and DNA Repository lists: HIV Biobank lists: Human Reference Genetic Material Repository lists: Hema-Quebec lists: LifeSource lists: National Temporal Bone Pathology Resource Registry lists: Blood Borne Pathogens Laboratory lists: Susan G. Komen Tissue Bank lists: Ohio State Biorepository lists: Alabama Organ Center lists: TRACK TBI Network lists: National Stem Cell Bank lists: Bioreclamation lists: Biobanque de Picardie lists: Ontario Tumour Bank lists: UK Stem Cell Bank lists: Fox Chase Biosample Repository Core Facility lists: Loma Linda University Cancer Center Biospecimen Laboratory lists: Barth Syndrome Biorepository lists: Interpore Cross International lists: Human Tissue Resource Network lists: California Transplant Services lists: National Cancer Institute Biorepositories lists: LifeCenter Organ Donor Network lists: HemaCare Corp. lists: Human Brain and Spinal Fluid Resource Center lists: Brain and Body Donation Program lists: Kings College London Infectious Diseases BioBank lists: Conticabase - European Sarcoma Database and Tumour Bank lists: Upstate New York Transplant Services lists: Donor Services of Indiana lists: Minnesota Liver Tissue Cell Distribution System lists: Research Tissue Repository - University of Connecticut lists: Mount Sinai Biobank lists: Rocky Mountain Tissue Bank lists: LifeCenter Northwest lists: International Histocompatibility Cell and DNA Bank lists: Regional Tissue Bank lists: Northwest Tissue Services lists: Washington University Tissue Bank lists: Capital Biosciences lists: Lawson Brain Tumour Tissue Bank lists: Andalusian Regional Tumour Bank lists: Protein Biotechnologies lists: Brainbow mouse resource at Jackson Labs lists: RTI Donor Services lists: University Andrology Laboratory lists: Cancer Control using Population-based Registries and Biobanks lists: UCSD Experimental Neuropath Laboratory lists: BioRep lists: da Vinci European Biobank lists: Wisconsin Tissue Bank lists: Indiana Organ Procurement Organization - IOPO lists: Quebec Leukemia Cell Bank lists: LifeBanc lists: Alzheimer's and Dementia Resource Center lists: Tayside Tissue Bank lists: Biobank Suisse lists: Florida Brain Bank lists: Erasmus MC Tissue Bank lists: Hackensack University Tissue Bank lists: World BioBank lists: University of Zurich SCRM - Cell-and Tissue Biobank lists: Tumorbank Basel Foundation lists: LifeLink Foundation lists: Gift of Hope Organ and Tissue Donor Network lists: St. Gallen Lung Biopsy Biobank lists: UNOS - United Network for Organ Sharing lists: UCSF AIDS Specimen Bank lists: MD Anderson Pancreas Tissue Bank lists: Kentucky Organ Donor Affiliates (KODA) lists: German Biobank Registry lists: Tennessee Donor Services lists: UC Davis Biorepository lists: MD Anderson Gynecologic Cancer Tissue Bank lists: Alamo Tissue Service, Ltd. lists: NeuroBiobank Munich lists: Brain-Net lists: Duke University Kathleen Price Bryan Brain Bank lists: Fairfax Cryobank lists: Lifeline of Ohio lists: University of Pittsburgh Brain Tissue Donation Program lists: Medical University of Vienna Institute of Neurology lists: NMDS - New Mexico Donor Services lists: South Carolina Biorepository System lists: CryoLife, Inc. lists: Tissue Banks International - TBI lists: NDRI Dorsal Root Ganglia Program lists: University of Texas Tumor Bank lists: Zebrafish International Resource Center lists: RLS Foundation Brain Bank lists: Dementia Brain Bank Research Program lists: St. Louis University Alzheimer's Brain Bank lists: Beta Cell Biology Consortium lists: UMKC Neuroscience Brain Tissue Bank and Research Laboratory lists: Parkinsons UK Brain Bank Duplicate lists: Einstein-Montefiore Institute for Clinical and Translational Research Biorepository lists: University of Rochester Program for Brain Tumors and Spinal Tumors lists: Case Western Reserve Tissue Procurement and Histology Core Facility lists: Human Tissue Resource Network lists: Boston University Biospecimen Archive Research Core lists: Adenoma Polyp Tissue Bank lists: Brown Brain Tissue Resource Center lists: Texas A and M Health Science Center MSC Distribution lists: JAX Cre Repository lists: Jackson Laboratory Neurobiology lists: WaNPRC Pathology and Tissue Program lists: Geisinger Biobank lists: KI Biobank lists: KI Biobank - KOL lists: Cell Line Knowledge Base lists: KI Biobank - SCI lists: Janus Serum Bank lists: KI Biobank - GEMS lists: KI Biobank - TBI lists: KI Biobank - EIMS lists: KI Biobank - IMSE lists: Vector Database lists: KI Biobank - BROAD lists: KI Biobank - SBP lists: KI Biobank STAGE-ADHD lists: KI Biobank - STANLEY lists: KI Biobank - STAR lists: KI Biobank - EuroClot lists: KI Biobank - Economical Behavior lists: CATSS - Child and Adolescent Twin Study in Sweden lists: DOGSS lists: UMAS University Hospital - Biobanks of the Department of Clinical Pathology and Cytology lists: KI Biobank - SATSA lists: FaceBase Biorepository lists: KI Biobank - SALTY lists: KI Biobank - STAGE lists: KI Biobank - TwinGene lists: BIOAIR - BIOmarkers in severe Chronic AIRway Disease lists: KI Biobank - NOAK lists: OLIN - Obstructive Lung disease in Northern Sweden lists: Cancer of the Prostate in Sweden (CAPS) lists: KI Biobank - CEFALO lists: ICAP - Integrated analysis of prostate cancer lists: LIBRO-1: Individualized prediction and prevention of breast cancer lists: KI Biobank - PROCAP lists: SCALE - Scandinavian lymphoma etiology lists: SPSAC - Stockholm PSA Cohort lists: KI Biobank - Tissue Biobank lists: KI Biobank - CEFAM lists: KI Biobank - PAROKRANK lists: KI Biobank - Sodertaljehjartan lists: CreZOO lists: European Mouse Mutant Archive lists: Toronto Centre for Phenogenomics lists: CMMR - Canadian Mouse Mutant Repository lists: NHMRC Australian PhenomeBank lists: Australian Phenomics Network lists: International Mouse Phenotyping Consortium (IMPC) lists: ZMP lists: Sanger Mouse Resources Portal lists: Chimpanzee Biomedical Research Resource lists: Owl Monkey Breeding and Research Resource lists: Squirrel Monkey Breeding and Research Resource lists: Human Developmental Biology Resource lists: MouseBook lists: Ambystoma Genetic Stock Center lists: Chordoma Foundation Biobank lists: Biobank Ireland Trust lists: UCSF Brain Tumor Tissue Bank lists: Bloomington Drosophila Stock Center lists: NIDDK Central Repository lists: VA Biorepository Brain Bank lists: University of Florida DNA and Tissue Bank lists: Wake Forest Cynomolgus Breeding Colony lists: CCUG: Culture Collection; University of Goteborg; Sweden lists: Dictyostelium discoideum genome database lists: Cooperative Human Tissue Network Western Division at Vanderbilt University Medical Center lists: NCI Breast and Colon Cancer Family Registries lists: British Columbia Breast Cancer Tumour Bank lists: Wake Forest Vervet Research Colony lists: NIMH Stem Cell Center lists: Musculoskeletal Transplant Foundation - MTF lists: NIMH Repository and Genomics Resources lists: Peginterferon and Ribavirin for Pediatric Patients with Chronic Hepatitis C lists: Collaborative Studies on Genetics of Alcoholism lists: National Swine Resource and Research Center lists: National Center for Research Resources - Primate Resources lists: Confederation of Cancer Banks lists: zfishbook lists: SIU CADRD Dementia Brain Autopsy Program lists: Allograft Resources lists: AASK Clinical Trial and Cohort Study lists: I3-CRB: Interoperable IT Infrastructure for Biological Resources Centres / Biobanks - France lists: Stanford Center for Narcolepsy lists: Xenopus Gene Collection lists: Mammalian Gene Collection lists: Parkinsons UK Brain Bank lists: Zebrafish Gene Collection lists: Stanley Brain Collection lists: Boston Area Community Health Survey lists: Central New York Eye and Tissue Bank lists: Chromosome 7 Annotation Project lists: New York Brain Bank at Columbia University lists: Deltagen and Lexicon Knockout Mice and Phenotypic Data Resource lists: National Cell Repository for Alzheimer's Disease lists: NIA Aged Rodent Colonies lists: Knockout Mouse Project Repository lists: NINDS/UCLA Repository for Parkinson's Disease Mouse Models lists: Aging Cell Repository lists: Mouse Mutagenesis Center for Developmental Defects lists: National NeuroAIDS Tissue Consortium lists: NIA Nonhuman Primate Tissue Bank lists: National Alzheimer's Coordinating Center lists: NIA Mutant Mouse Aging Colony Handbook lists: JAX Mice: Neural Tube Defects lists: Caenorhabditis Genetics Center lists: Tulane Stem Cell Research and Regenerative Medicine Tissue Culture Core lists: NUgene Project lists: JAX Neuroscience Mutagenesis Facility lists: Hyper Cell Line Database lists: CHARTER - CNS HIV Antiretroviral Therapy Effects Research lists: BayGenomics lists: Alzheimer's Disease Cooperative Study lists: Baboon Research Resouces lists: Rhesus Monkey Breeding and Research lists: Mouse Mutant Resource lists: EMD4Biosciences lists: German Gene Trap Consortium lists: STRIDE Virtual Biospecimen Bank lists: Stanford/VA Aging Clinical Research Center lists: Spanish National Tumour Bank Network lists: Bioserve Global BioRepository lists: Saint-Luc Tumour Bank lists: Virgin Health Bank lists: UM Brain Endowment Bank lists: Manitoba Breast Tumor Bank lists: NIMH Brain Tissue Collection lists: UCL-RFH BioBank lists: Coriell Institute Stem Cell Biobank lists: MassGeneral Institute for Neurodegenerative Disease lists: Mayo Clinic Jacksonville: Neuropathology and Microscopy lists: NYU Alzheimer's Disease Center lists: Brain Research Institute Biobank Resources lists: Johns Hopkins Alzheimer's Disease Research Center lists: Rush Alzheimer's Disease Center lists: Massachusetts Alzheimer's Disease Research Center lists: University of Kentucky's Alzheimer's Disease Center lists: Michigan Alzheimer's Disease Center Brain Bank lists: Washington University Knight Alzheimer's Disease Research Center lists: Mount Sinai Alzheimer's Disease Research Center lists: Taub Institute for Research on Alzheimers Disease and the Aging Brain lists: Institute for Basic Research in Developmental Disabilities lists: Vietnam Era Twin Registry Biospecimen Repository lists: Study of Womens Health Across the Nation (SWAN) Repository lists: Dynamics of Health Aging and Body Composition (Health ABC) lists: University of Pennslyvania Brain Bank lists: Layton Center Biomarkers and Genetics lists: MUSC Center on Aging Campbell Neuropathology Laboratory lists: UT Southwestern ADC Brain Tissue Donation Program lists: KI Biobank - Parkinson lists: KI Biobank - EXT lists: GIA Brain Bank Program lists: KI Biobank - ALF lists: KI Biobank - HARMONY lists: Twin Study of Child and Adolescent Development - TCHAD lists: SHEEP - Stockholm Heart Epidemiology Program lists: CreZoo lists: Fleming Database lists: Los Angeles Family and Neighborhood Survey lists: Health and Retirement Study lists: Iowa 65+ Rural Health Study lists: National Long Term Care Survey lists: National Social Life Health and Aging Project (NSHAP) lists: Framingham Heart Study lists: Integrated Cell Lines lists: Chronic Renal Insufficiency Cohort Study lists: PrecisionMed lists: Biopta lists: Manhattan HIV Brain Bank lists: LifeGene lists: Puget Sound Blood Center lists: Fisher BioServices lists: National Psoriasis BioBank lists: StemCure Tissue Banking lists: ProMedDx lists: Biological Resource Centre - National Institute for Cancer Research lists: Coriell Biobank lists: StemSave lists: Dublin Brain Bank lists: Mayo Mitochondrial Disease Biobank lists: NIA Aged Rodent Tissue Bank lists: MVZ Collections lists: CARTaGENE lists: European Collection of Cell Cultures lists: UK DNA Banking Network lists: Biobanc USA lists: Rutgers Cell and DNA Repository lists: Genetic Alliance Biobank lists: Hunt Biobank lists: Advanced Biohealing, Inc. lists: Edinburgh Brain and Tissue Banks lists: JCM lists: Movement Disorders Biobank lists: Surgical Biologics - a MiMedx Group Company lists: Chernobyl Tissue Bank lists: Tissue Solutions lists: Conversant Biologics Inc. lists: Narayana Hrudayalaya Tissue Bank and Stem Cell Research Center lists: AlloSource lists: PathServe lists: UC Davis Alzheimers Disease Center - Resources lists: Asterand lists: RTI Biologics lists: Mayo Clinic Biobank lists: Lifelines Biobank lists: Mayo Validation Support Services Biobank lists: LifeNet Health lists: Medical Biobank lists: Fraunhofer Institute for Biomedical Engineering lists: BWH Specimen Bank lists: University of Minnesota Bionet - Academic Health Center lists: DF/HCC DNA Resource Core lists: Indiana Alzheimer Disease Center lists: UK Biobank lists: National Institute on Drug Abuse Center for Genetic Studies lists: Oregon Brain Bank lists: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) lists: Northwestern CNADC Tissue Bank / Neuropathology Core lists: Loyola University Medical Center / Hines VA Brain Bank lists: Trinity Biobank lists: SAPALDIA lists: Ohio U Diabetes Endocrine Biorepository lists: National Cell Culture Center lists: Diabetic Complications Consortium lists: Xenbase lists: Blueprint Epigenome lists: EBiSC lists: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB) lists: Parkinson's Progression Markers Initiative lists: OriGene lists: University of Nottingham NASC Nottingham Arabidopsis Stock Centre is related to: Rat Resource and Research Center is related to: Honey Bee Brain EST Project is related to: Islet Cell Resource Centers is related to: Special Mouse Strains Resource is related to: NIH Human Pluripotent Stem Cell Registry is related to: Harvard Brain Tissue Resource Center is related to: Louisiana Organ Procurement Agency - LOPA is related to: Washington Regional Transplant Community - WRTC is related to: Minnesota Liver Tissue Cell Distribution System is related to: Zebrafish International Resource Center is related to: Bloomington Drosophila Stock Center is related to: National Swine Resource and Research Center is related to: Xenopus Gene Collection is related to: Mammalian Gene Collection is related to: Zebrafish Gene Collection is related to: Mouse Mutagenesis Center for Developmental Defects is related to: NIA Mutant Mouse Aging Colony Handbook is related to: Manhattan HIV Brain Bank is related to: National Institute on Drug Abuse Center for Genetic Studies is related to: International Mouse Strain Resource is related to: Jackson Laboratory is related to: Rat Genome Database (RGD) is related to: VISTA Enhancer Browser is related to: GenitoUrinary Development Molecular Anatomy Project is related to: Coriell Cell Repositories is related to: NICHD Brain and Tissue Bank for Developmental Disorders is related to: Human Brain and Spinal Fluid Resource Center is related to: UM Brain Endowment Bank has parent organization: One Mind for Research has parent organization: Neuroscience Information Framework |
The community can contribute to this resource, Data are licensed by their respective owners, Use and distribution is subject to the Terms of Use by the original resource | nlx_143622 | https://neuinfo.org/mynif/search.php?q=*&cf=Biospecimen&t=indexable&nif=nlx_143622-1 http://neuinfo.org/onemind/index.php?q=*&b=0&r=20 | SCR_004193 | SciCrunch Registry | One Mind: One Voice Bio-repository Cosmic Landscape, One Mind Biospecimen Banks | 2026-10-24 12:49:51 | 0 | ||||||
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Zebrafish Atlas Resource Report Resource Website 1+ mentions |
Zebrafish Atlas (RRID:SCR_006722) | Zebrafish Atlas | atlas, data or information resource, reference atlas | Atlas containing 2- and 3-dimensional, anatomical reference slides of the lifespan of the zebrafish to support research and education worldwide. Hematoxylin and eosin histological slides, at various points in the lifespan of the zebrafish, have been scanned at 40x resolution and are available through a virtual slide viewer. 3D models of the organs are reconstructed from plastic tissue sections of embryo and larvae. The size of the zebrafish, which allows sections to fall conveniently within the dimensions of the common 1 x 3 glass slide, makes it possible for this anatomical atlas to become as high resolution as for any vertebrate. That resolution, together with the integration of histology and organ anatomy, will create unique opportunities for comparisons with both smaller and larger model systems that each have their own strengths in research and educational value. The atlas team is working to allow the site to function as a scaffold for collaborative research and educational activity across disciplines and model organisms. The Zebrafish Atlas was created to answer a community call for a comprehensive, web-based, anatomical and pathological atlas of the zebrafish, which has become one of the most widely used vertebrate animal models globally. The experimental strengths of zebrafish as a model system have made it useful for a wide range of investigations addressing the missions of the NIH and NSF. The Zebrafish Atlas provides reference slides for virtual microscopic viewing of the zebrafish using an Internet browser. Virtual slide technology allows the user to choose their own field of view and magnification, and to consult labeled histological sections of zebrafish. We are planning to include a complete set of embryos, larvae, juveniles, and adults from approximately 25 different ages. Future work will also include a variety of comparisons (e.g. normal vs. mutant, normal vs. diseased, multiple stages of development, zebrafish with other organisms, and different types of cancer)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | embryo, eosin, expression, genetic, adult, anatomical, anatomy, cancer, development, hematoxylin, histological, histology, juvenile, larvae, lifespan, model, slide, sagittal, coronal, transverse, stage, embryonic zebrafish, juvenile zebrafish, immature zebrafish, larval zebrafish, young zebrafish, adult zebrafish | has parent organization: Pennsylvania State University | Normal, Mutant, Cancer | NCRR | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-24352 | SCR_006722 | SciCrunch Registry | Penn State Zebrafish Atlas, Zebrafish Atlas - A Lifespan Atlas of the Zebrafish, PSU Zebrafish Atlas | 2026-10-24 12:49:53 | 3 | |||||
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Dfam Resource Report Resource Website 100+ mentions |
Dfam (RRID:SCR_021168) | data or information resource, database | Open collection of Transposable Element DNA sequence alignments, hidden Markov Models, consensus sequences, and genome annotations.Dfam 3.2 provides early access to uncurated, de novo generated families. | Transposable Element, DNA sequence alignments, hidden Markov Models, consensus sequences, genome annotations | is related to: RepeatModeler | NHGRI R01 HG002939; NHGRI U24 HG010136 |
DOI:10.1186/s13100-020-00230-y | Free, Freely available | SCR_021168 | SciCrunch Registry | Dfam 3.2 | 2026-10-24 12:51:14 | 110 | |||||||
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ZCre Resource Report Resource Website |
ZCre (RRID:SCR_000815) | ZCre | biomaterial supply resource, material resource | ZCre is a consortium of researchers who have a shared interest in developing Cre/lox based tools for use in the zebrafish model organism. ZCre plans to generate 15 or more tissue specific ERT2CreERT2 driver lines to be expressed in either differentiated cell types or precursor/stem cells, as well as 20 or more lines based upon multilox technology. One set of multilox transgenes will allow long-term permanent labelling of individual cells for lineage tracing and other applications. Another set will allow perturbation of single pathways within individual cells (PathM lines). In order to make these lines ZCre has developed a three-way cloning system using Gateway technology (Invitrogen). Once constructs are made they will be deposited at Addgene.org. Transgenic lines will be available from ZCre or from regional stock centers as requested. | cre, clone, cre transgenic line, lox transgenic line, ert2creert2 driver line, transgenic line, construct |
uses: Addgene is listed by: One Mind Biospecimen Bank Listing has parent organization: University of Sheffield; South Yorkshire; United Kingdom has parent organization: University of Bath; North East Somerset; United Kingdom |
Medical Research Council UK | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151618 | SCR_000815 | SciCrunch Registry | 2026-10-24 12:51:18 | 0 | |||||||
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Resource Identification Portal Resource Report Resource Website 10+ mentions |
Resource Identification Portal (RRID:SCR_004098) | RII Portal | data or information resource, portal | Portal providing identifiers for Antibodies, Model Organisms, and Tools (software, databases, services) created in support of the Resource Identification Initiative, which aims to promote research resource identification, discovery, and reuse. The portal offers a central location for obtaining and exploring Research Resource Identifiers (RRIDs) - persistent and unique identifiers for referencing a research resource. A critical goal of the RII is the widespread adoption of RRIDs to cite resources in the biomedical literature and other places that reference their generation or use. RRIDs use established community identifiers where they exist, and are cross-referenced in their system where more than one identifier exists for a single resource. | antibody, organism, service resource, software resource, database, resource, identifier, citation, biomedical, publication, research resource identifier, rrid, ASWG |
uses: Antibody Registry uses: SciCrunch Registry uses: Mouse Genome Informatics (MGI) uses: Zebrafish Information Network (ZFIN) uses: Rat Genome Database (RGD) uses: WormBase uses: FlyBase recommends: SciCrunch Registry recommends: Mouse Genome Informatics (MGI) recommends: Zebrafish Information Network (ZFIN) recommends: Rat Genome Database (RGD) is recommended by: Neuroscience Information Framework is recommended by: SciCrunch Registry is related to: NIF Data Federation has parent organization: SciCrunch |
NIGMS R24 GM144308 | The community can contribute to this resource | nlx_158572 | SCR_004098 | SciCrunch Registry | Resource Identification Initiative Portal | 2026-10-24 12:51:23 | 20 | ||||||
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zfishbook Resource Report Resource Website 1+ mentions |
zfishbook (RRID:SCR_006896) | zfishbook | biomaterial supply resource, material resource | Collection of revertible protein trap gene-breaking transposon (GBT) insertional mutants in zebrafish with active or cryopreserved lines from initially identified lines. Open to community-wide contributions including expression and functional annotation and represents world-wide central hub for information on how to obtain these lines from diverse members of International Zebrafish Protein Trap Consortium (IZPTC) and integration within other zebrafish community databases including Zebrafish Information Network (ZFIN), Ensembl and National Center for Biotechnology Information. Registration allows users to save their favorite lines for easy access, request lines from Mayo Clinic catalog, contribute to line annotation with appropriate credit, and puts them on optional mailing list for future zfishbook newletters and updates. | gene-breaking transposon, expression-tagged, revertible mutation, gene, transposon, mutation, mutant, brain, muscle, skin, secretory, cardiac, brain line, muscle line, skin line, secretory line, cardiac line, plasmid, expression, functional annotation, gene-breaking transposon line, gene-break transposon mutagenesis, cell line, annotation, embryonic zebrafish, larval zebrafish, bio.tools |
is listed by: One Mind Biospecimen Bank Listing is listed by: Debian is listed by: bio.tools is related to: Addgene is related to: Zebrafish International Resource Center has parent organization: Mayo Clinic Minnesota; Minnesota; USA |
Mayo Clinic Cancer Center ; Mayo Foundation ; NHGRI HG006431; NIDA DA14546; NIGMS GM63904 |
PMID:22067444 | Free, Freely available | biotools:zfishbook, nlx_151613 | https://bio.tools/zfishbook | SCR_006896 | SciCrunch Registry | book, z fish book, zfishbook, fish, z | 2026-10-24 12:51:30 | 4 | ||||
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Target genes of Wnt/beta-catenin signaling Resource Report Resource Website 10+ mentions |
Target genes of Wnt/beta-catenin signaling (RRID:SCR_007022) | Target genes of Wnt/beta-catenin signaling | data or information resource, data set | A list of target genes of Wnt/beta-catenin signaling. Suggestions for additions are welcome. Direct targets are defined as those with Tcf binding sites and demonstrating that these sites are important. | target gene, wnt/beta-catenin signaling, wnt, beta-catenin, signaling, gene | has parent organization: Stanford University; Stanford; California | Colon cancer, Tumor, Adenocarcinoma, Melanoma, Cancer | The community can contribute to this resource | nlx_156867 | SCR_007022 | SciCrunch Registry | 2026-10-24 12:52:10 | 24 | |||||||
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UniProt Chordata protein annotation program Resource Report Resource Website |
UniProt Chordata protein annotation program (RRID:SCR_007071) | Chordata protein annotation program | data or information resource, data set | Data set of manually annotated chordata-specific proteins as well as those that are widely conserved. The program keeps existing human entries up-to-date and broadens the manual annotation to other vertebrate species, especially model organisms, including great apes, cow, mouse, rat, chicken, zebrafish, as well as Xenopus laevis and Xenopus tropicalis. A draft of the complete human proteome is available in UniProtKB/Swiss-Prot and one of the current priorities of the Chordata protein annotation program is to improve the quality of human sequences provided. To this aim, they are updating sequences which show discrepancies with those predicted from the genome sequence. Dubious isoforms, sequences based on experimental artifacts and protein products derived from erroneous gene model predictions are also revisited. This work is in part done in collaboration with the Hinxton Sequence Forum (HSF), which allows active exchange between UniProt, HAVANA, Ensembl and HGNC groups, as well as with RefSeq database. UniProt is a member of the Consensus CDS project and thye are in the process of reviewing their records to support convergence towards a standard set of protein annotation. They also continuously update human entries with functional annotation, including novel structural, post-translational modification, interaction and enzymatic activity data. In order to identify candidates for re-annotation, they use, among others, information extraction tools such as the STRING database. In addition, they regularly add new sequence variants and maintain disease information. Indeed, this annotation program includes the Variation Annotation Program, the goal of which is to annotate all known human genetic diseases and disease-linked protein variants, as well as neutral polymorphisms. | chordata, protein, protein annotation, functional annotation, human, non-human vertebrate, xenopus laevis, xenopus tropicalis, zebrafish, protein sequence, protein sequencing, nucleotide sequence, sequence, annotation, sequence variant, disease, proteome, gold standard |
is related to: Human Proteomics Initiative is related to: UniProtKB has parent organization: UniProt |
nlx_143879 | SCR_007071 | SciCrunch Registry | 2026-10-24 12:52:10 | 0 | |||||||||
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Integrated Nervous System Connectivity Resource Report Resource Website |
Integrated Nervous System Connectivity (RRID:SCR_006391) | NSC | data or information resource, data set | A data set of connectivity statements from BAMS, CoCoMac, BrainMaps, Connectome Wiki, the Hippocampal-Parahippocampal Table of Temporal-Lobe.com, and Avian Brain Circuitry Database. The data set lists which brain sites connectivity is to and from, the organism connectivity is mapped in, and journal references. | connectivity, nervous system, macaque, brain, bird, data set |
uses: Avian Brain Circuitry Database uses: Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat uses: Connectome Wiki uses: BrainMaps.org uses: CoCoMac uses: Brain Architecture Management System uses: BlueBrain Bluima Connectivity is used by: NIF Data Federation has parent organization: Integrated |
Data are licensed by their respective owners, Use and distribution is subject to the terms of use by the original resource | nif-0000-07732 | https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-8 https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-8, http://neuinfo.org/nif/nifgwt.html?query=nif-0000-07732, https://www.neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nif-0000-07732-1 | SCR_006391 | SciCrunch Registry | NIF Integrated Nervous System Connectivity View, Neuroscience Information Framework Integrated Nervous System Connectivity, Integrated NSC View, Integrated NSC, NIF NSC, NIF Integrated NSC, Integrated Nervous System Connectivity View, Nervous System Connectivity | 2026-10-24 12:52:09 | 0 | ||||||
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Sanford Burnham Prebys Medical Discovery Institute Animal Facility Resource Report Resource Website |
Sanford Burnham Prebys Medical Discovery Institute Animal Facility (RRID:SCR_014849) | biomaterial supply resource, material resource | Animal facility that provides housing for specific pathogen free rodents, frogs, and zebrafish. The facility also has trained animal care technicians provide expertise in animal husbandry, transgenic and knockout mouse breeding colony maintenance and assistance with routine technical procedures. | animal, facility, housing, rodent, frog, zebrafish, specific pathogen free, spf, transgenic mouse, knockout mice, breeding | Commercially available | SCR_014849 | SciCrunch Registry | SBP Animal Facility, SBP Medical Discovery Institute Animal Facility | 2026-10-24 12:51:46 | 0 | ||||||||||
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Disease Genes Conserved Sequence Tags Database Resource Report Resource Website |
Disease Genes Conserved Sequence Tags Database (RRID:SCR_000760) | data or information resource, database | A database of conserved sequence elements, identified by a systematic genomic sequence comparison between a set of human genes involved in the pathogenesis of genetic disorders and their murine counterparts. Human and mouse genomic sequences were compared by BLASTZ. Sequences longer than 100 and with identity better than 70 were selected as CSTs and imported into the database. CSTs are extensively annotated with respect to exon/intron structure and other biological parameters. CST counterparts in other species were identified by using BLAST to scan genomes from other species, and selecting on the basis of homology and co-linearity. The database can be accessed by gene, chromosomal location, graphic browser, DNA features, and coding regions. | database, conserved sequence element, genomic sequence, human gene, pathogenesis, genetic disorder, blastz, cst | Telethon Foundation ; the Associazione Italiana per la Ricerca sul Cancro (AIRC) ; the Federazione Italiana per la Ricerca sul Cancro (FIRC) ; the Italian Ministry for Research (MURST) ; the National Council for Research (CNR) ; Regione Campania ; BioGeM |
PMID:15608249 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-21121 | SCR_000760 | SciCrunch Registry | DG CST Database | 2026-10-24 12:50:18 | 0 | |||||||
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BodyMap-Xs Resource Report Resource Website 1+ mentions |
BodyMap-Xs (RRID:SCR_001147) | BodyMap-Xs | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 17, 2013. A taxonomical and anatomical database of latest cross species animal EST data, clustered by UniGene and inter connected by Inparanoid. Users can search by Unigene, RefSeq, or Entrez Gene ID, or search for Gene Name or Tissue type. Data is also sortable and viewable based on qualities of normal, Neoplastic, or other. The last data import appears to be from 2008 | expressed sequence tag, comparative genomics, anatomy, taxonomy, brain, blood, connective, reproductive, muscular, alimentary, lung, liver, urinary, endocrine, exocrine, embryo, homology, gene expression, ortholog, paralog | has parent organization: DNA DataBank of Japan (DDBJ) | Neoplasm, Normal | Japanese Ministry of Education Culture Sports Science and Technology MEXT ; New Energy and Industrial Technology Development Organization |
PMID:16381946 PMID:11125076 PMID:10592203 |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-02617 | http://bodymap.jp/, http://bodymap.ims.u-tokyo.ac.jp/ | SCR_001147 | SciCrunch Registry | BodyMap-Xs: anatomical and taxonomical breakdown of animal EST, BodyMap, BodyMap- human and mouse gene expression database, BodyMap: human and mouse gene expression database, BodyMap-cross species, BodyMap-Xs(cross species) | 2026-10-24 12:50:20 | 1 | |||
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Duke O'Brien Center for Kidney Research Animal Models Core Resource Report Resource Website |
Duke O'Brien Center for Kidney Research Animal Models Core (RRID:SCR_015267) | access service resource, core facility, resource, service resource | Core facility that provides access to a range of experimental models of kidney, heart and vascular diseases. It also provides comprehensive phenotyping services for kidney functions, blood pressure and other cardiovascular functions. | animal model, experimental kidney model, experimental heart model, experimental vascular model |
is listed by: NIDDK Information Network (dkNET) has parent organization: Duke O'Brien Center for Kidney Research has parent organization: Duke University School of Medicine; North Carolina; USA has parent organization: Duke University; North Carolina; USA is organization facet of: Duke O'Brien Center for Kidney Research |
kidney disease, heart disease, hypertension, muscle disease | NIDDK P30DK096493 | Available to the research community | SCR_015267 | SciCrunch Registry | 2026-10-24 12:52:47 | 0 | ||||||||
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UAB Hepatorenal Fibrocystic Diseases Core Center Engineered Models Resource Resource Report Resource Website |
UAB Hepatorenal Fibrocystic Diseases Core Center Engineered Models Resource (RRID:SCR_015310) | access service resource, core facility, resource, service resource | Core whose goals include Generation of New Animal and Cell Models of HRFDs, to establish In Vivo Biosensors to Study Signaling Pathways Involved in HRFD Ciliopathies, and to generate and distribute HRFD Related Biologicals to the Center?s Investigator Base. | HRFD genes, engineered models |
is listed by: NIDDK Information Network (dkNET) has parent organization: UAB Hepatorenal Fibrocystic Diseases Core Center is organization facet of: UAB Hepatorenal Fibrocystic Diseases Core Center |
Hepatorenal Fibrocystic Disease | NIDDK P30DK074038 | Available to the research community, Acknowledgement requested | SCR_015310 | SciCrunch Registry | 2026-10-24 12:52:48 | 0 | ||||||||
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Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core Resource Report Resource Website |
Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core (RRID:SCR_015312) | access service resource, core facility, resource, service resource | Core that makes available PKD model systems and technologies to PKD researchers at Mayo and at other institutions. Its services include C. elegans PKD-targeted services, Zebrafish PKD-targeted services, and Rodent PKD-targeted services. | model systems, c. elegans, zebrafish, rodents, PKD genes |
is listed by: NIDDK Information Network (dkNET) has parent organization: Mayo Clinic Minnesota; Minnesota; USA has parent organization: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester is organization facet of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester |
Polycystic Kidney Disease | NIDDK P30DK090728 | Available to the research community | SCR_015312 | SciCrunch Registry | 2026-10-24 12:52:48 | 0 |
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