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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Karolinska Institute Biomedicum Flow Cytometry Core Facility Resource Report Resource Website |
Karolinska Institute Biomedicum Flow Cytometry Core Facility (RRID:SCR_024470) | BFC | access service resource, core facility, service resource | Facility is shared resource laboratory providing comprehensive suite of services to support research needs in flow cytometry. Offers conventional and full spectral cytometry for multi-parametric analysis, as well as multiparameter fluorescence activated cell sorting. | ABRF, flow cytometry, cell sorting, analysis service, Karolinska Institute |
is listed by: ABRF CoreMarketplace has parent organization: Karolinska Institute; Stockholm; Sweden |
ABRF_2457 | https://coremarketplace.org/?FacilityID=2457&citation=1 | SCR_024470 | Biomedicum Flow Cytometry (BFC) Core Facility, Biomedicum Flow Cytometry Core Facility Karolinska Institutet | 2026-09-05 06:34:38 | 0 | |||||||
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Florida State University Innovation Hub Core Facility Resource Report Resource Website |
Florida State University Innovation Hub Core Facility (RRID:SCR_024482) | access service resource, core facility, service resource | Hosts makerspaces, labs, and promotes design based frameworks toward iteration and innovation. Acts as open intersection of university departmental collaboration and provides access to low barrier prototyping tools. Supports FSU student, staff, and faculty research initiatives. | ABRF, open intersection of university departmental collaboration, access to low barrier prototyping tools, |
is listed by: ABRF CoreMarketplace has parent organization: Florida State University; Florida; USA |
Restricted | ABRF_2459 | https://coremarketplace.org/?FacilityID=2459&citation=1 | SCR_024482 | , Florida State University Innovation Hub, FSU-Innovation Hub | 2026-09-05 06:34:38 | 0 | |||||||
|
University of Lethbridge Canadian Center for Hydrodynamics Core Facility Resource Report Resource Website |
University of Lethbridge Canadian Center for Hydrodynamics Core Facility (RRID:SCR_023791) | access service resource, core facility, service resource | Provides comprehensive solution characterization of macromolecules or macromolecular interactions and assemblies. This includes description of stoichiometry, size composition, cargo loading.Core is equipped with analytical ultracentrifuges featuring multi-wavelength UV-visible detection, as well as Rayleigh interference optics and fluorescence emission detection for fluorescent tags with 488 nm excitation. | USEDit, ABRF, hydrodynamics, macromolecules characterization, macromolecular interactions characterization, macromolecular assemblies characterization, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Lethbridge; Alberta; Canada |
Open | ABRF_354 | https://coremarketplace.org/?FacilityID=354&citation=1 | SCR_023791 | University of Lethbridge Canadian Center for Hydrodynamics (CCH), Canadian Center for Hydrodynamics (CCH) | 2026-09-05 06:34:37 | 0 | |||||||
|
OpenSAFELY Resource Report Resource Website 10+ mentions |
OpenSAFELY (RRID:SCR_023790) | software resource, source code | The code that runs the OpenSAFELY platform used for analysis of electronic health records data. | OpenSAFELY platform, analysis of electronic health records data, | Free, Available for download, Freely available | https://www.opensafely.org/ | SCR_023790 | 2026-09-05 06:34:37 | 43 | ||||||||||
|
Spatiotemporal pattern Exploration of Brain Resource Report Resource Website |
Spatiotemporal pattern Exploration of Brain (RRID:SCR_023825) | STEB | software resource, source code | Web based visual analytics tool for the comprehensive exploration of genomic and phenotypic patterns, especially for the spatiotemporal patterns, in the developing mouse brain. The tool is designed in JavaScript and D3.js, the data is based on Allen Developing Mouse Brain Atlas (ADMBA) data. | Allen Developing Mouse Brain Atlas, visual analytics, genomic and phenotypic patterns, developing mouse brain | is related to: Allen Institute for Brain Science | Free, Available for download, Freely available | SCR_023825 | 2026-09-05 06:34:37 | 0 | |||||||||
|
University of Arizona Molecular Clinical Core Facility Resource Report Resource Website |
University of Arizona Molecular Clinical Core Facility (RRID:SCR_024479) | AZClinCore | access service resource, core facility, service resource | Core is CLIA certified/CAP accredited laboratory specializing in high complexity genetic and serological clinical testing and research. Provides inpatient and outpatient diagnostic testing services as well as support for clinical trial and clinical research activities for physicians, researchers and industry clients. The AZClinCore has aided in development of novel genetic testing and clinical trial protocols as well as providing evaluations for new technology and testing platforms. Supports end-to-end clinical testing as well as reference lab services. | ABRF, genetic and serological clinical testing, inpatient and outpatient diagnostic testing services, clinical trial and clinical research support, clinical testing, | has parent organization: University of Arizona; Arizona; USA | Open | ABRF_2458 | https://coremarketplace.org/?FacilityID=2458&citation=1 | SCR_024479 | UA-Arizona Molecular Clinical Core, Arizona Molecular Clinical Core, University of Arizona UA-Arizona Molecular Clinical Core | 2026-09-05 06:34:38 | 0 | ||||||
|
State University of Campinas Institute of Chemistry Microscopy Core Facility Resource Report Resource Website 10+ mentions |
State University of Campinas Institute of Chemistry Microscopy Core Facility (RRID:SCR_024633) | access service resource, core facility, service resource | Core offers services in advancing scientific research in the field of chemistry. Provides Scanning Electron Microscopy (SEM), Atomic Force Microscopy (AFM), Confocal Laser Scanning Microscopy (CLSM), and Optical Microscopy. Offers sample preparation techniques, including ultramicrotome, ultracryomicrotome, and sputter coating,training and technical support. | ABRF, Scanning Electron Microscopy (SEM), Atomic Force Microscopy, Confocal Laser Scanning Microscopy, Optical Microscopy, ultramicrotome, ultracryomicrotome, sputter coating, |
is listed by: ABRF CoreMarketplace has parent organization: State University of Campinas; São Paulo; Brazil |
Open | ABRF_2534 | https://coremarketplace.org/?FacilityID=2534&citation=1 | SCR_024633 | , UNICAMP Institute of Chemistry Microscopy Core Facility, UNICAMP - Institute of Chemistry - Microscopy Core Facility | 2026-09-05 06:34:39 | 14 | |||||||
|
MetaPSICOV Resource Report Resource Website 1+ mentions |
MetaPSICOV (RRID:SCR_024517) | software resource, source code | Software tool for accurate prediction of contacts and long range hydrogen bonding in proteins. | accurate prediction, contacts and long range hydrogen bonding in proteins prediction, | is listed by: SoftCite | PMID:25431331 | Free, Available for download, Freely available | SCR_024517 | 2026-09-05 06:34:39 | 2 | |||||||||
|
DMS_with_Alanine_scan Resource Report Resource Website 1+ mentions |
DMS_with_Alanine_scan (RRID:SCR_023949) | software resource, source code | Code used for data processing, variant impact predictor modelling and result analysis. Used to improve prediction results to predict the impact of amino acid variants. Extended linear regression-based predictor to explore whether incorporating data from alanine scanning, widely-used low-throughput mutagenesis method, would improve prediction results. | Extended linear regression-based predictor, improve prediction results, amino acid variants impact prediction, alanine scanning data incorporation, mutagenesis method prediction results, | DOI:10.1101/2022.12.14.520494 | Free, Available for download, Freely available | SCR_023949 | 2026-09-05 06:34:37 | 1 | ||||||||||
|
Boise State University; Idaho; USA Resource Report Resource Website 1+ mentions |
Boise State University; Idaho; USA (RRID:SCR_024730) | university | Public research university in Boise, Idaho. Founded in 1932 by the Episcopal Church, it became independent junior college in 1934 and has been awarding baccalaureate and masters degrees since 1965. It became public institution in 1969. |
is parent organization of: Boise State University Biomolecular Research Center Core Facility is parent organization of: Boise State University Fabrication, Characterization, and Testing Core Facility is parent organization of: Boise State University Biomedical Research Institute Biomolecular Research Core Facility is parent organization of: Boise State University Biomedical Research Vivarium Core Facility |
GRID grid.184764.8; ISNI 0000 0001 0670 228X; Crossref Funder ID 100007233; Wikidata Q891082; | https://ror.org/02e3zdp86 | SCR_024730 | 2026-09-05 06:34:40 | 1 | ||||||||||
|
Pep2TCR Resource Report Resource Website 1+ mentions |
Pep2TCR (RRID:SCR_024721) | data access protocol, software resource, source code, web service | Web tool for CD4 TCR specificity prediction and biology applications. Used for accurate prediction of CD4 T cell receptor binding specificity through transfer learning and ensemble approach. Repository comprises codes of Pep2TCR, providing comprehensive guidance for researchers interested in Pep2TCR. | CD4 TCR specificity prediction, deep learning, transfer learning, ensemble learning, neoantigen, CD4+ T cell | Free, Available for download, Freely available | https://hub.docker.com/repository/docker/liuxslab/pep2tcr, http://pep2tcr.liuxslab.com | SCR_024721 | 2026-09-05 06:34:40 | 1 | ||||||||||
|
TheBehaviourForum.org Resource Report Resource Website |
TheBehaviourForum.org (RRID:SCR_024722) | data or information resource, portal, topical portal | Portal for discussion of scientific matters relating to use of home cages to behavioural research in laboratory animals, including experimental procedures, use of equipment, problem solving, ethical considerations, job offers and advertisement of community events. | forum, use of home cages, behavioural research in laboratory animals, experimental procedures, ethical considerations, | is related to: International Mouse Phenotyping Consortium (IMPC) | European Cooperation in Science and Technology | Free, Freely available | SCR_024722 | 2026-09-05 06:34:40 | 0 | |||||||||
|
University of Chicago MRI Research Center Core Facility Resource Report Resource Website 1+ mentions |
University of Chicago MRI Research Center Core Facility (RRID:SCR_024723) | access service resource, core facility, service resource | MRI Research Center houses magnetic resonance scanners and highly qualified experienced staff for support of research projects with MR imaging component. | MRI, magnetic resonance scanner service, MR imaging project service, |
is listed by: ABRF CoreMarketplace has parent organization: University of Chicago; Illinois; USA |
Restricted | ABRF_2553 | https://coremarketplace.org/?FacilityID=2553&citation=1 | SCR_024723 | , University of Chicago MRI Research Center | 2026-09-05 06:34:40 | 5 | |||||||
|
DSCompare Resource Report Resource Website |
DSCompare (RRID:SCR_024724) | data analysis software, data processing software, software application, software resource | Software tool that analyzes, compares and validates analysis and reanalysis datasets with observed dataset using statistical tests such as Mann Whitney (U-test), t-test, F-test, Root Mean Square Error (RMSE), correlation coefficient, BIAS, normalized BIAS, trend, scatter index and maximum anomalies. | analyzes, compares and validates analysis, reanalysis datasets with observed dataset, statistical tests usage, | DOI:10.1016/j.simpa.2023.100578 | Free, Available for download, Freely available | SCR_024724 | 2026-09-05 06:34:40 | 0 | ||||||||||
|
Early Postnatal Developmental Mouse Brain Atlas Resource Report Resource Website 1+ mentions |
Early Postnatal Developmental Mouse Brain Atlas (RRID:SCR_024725) | epDevAtlas | atlas, data or information resource, laboratory portal, organization portal, portal | Suite of open access resources including 3D atlases of early postnatally developing mouse brain and mapped cell type density growth charts, which can be used as standalone resources or to implement data integration. Web platform can be utilized to analyze and visualize the spatiotemporal growth of GABAergic, microglial, and cortical layer-specific cell type densities in 3D. Morphologically averaged symmetric template brains serve as the basis reference space and coordinate system with an isotropic resolution of 20 μm (XYZ in coronal plane). Average transformations were conducted at 20 μm voxel resolution by interpolating high resolution serial two photon tomography images from primarily Vip-IRES-Cre;Ai14 mice at postnatal (P) ages P4, P6, P8, P10, P12, and P14. For all ages, anatomical labels from the P56 Allen Mouse Brain Common Coordinate Framework (Allen CCFv3) were iteratively down registered to each early postnatal time point in a non-linear manner, aided by manual parcellations of landmarks in 3D, consistent with the Allen Mouse Reference Atlas Ontology. | 3D atlases, early postnatally developing mouse brain, mapped cell type density growth charts, Allen Mouse Reference Atlas Ontology, |
uses: Allen Mouse Reference Atlas Ontology uses: Allen Mouse Brain Common Coordinate Framework is organization facet of: BRAIN Initiative Cell Atlas Network |
NIMH RF1MH12460501; NINDS R01NS108407 |
DOI:10.1101/2023.11.24.568585 | Free, Freely available | SCR_024725 | 2026-09-05 06:34:40 | 3 | |||||||
|
IKA: MTS 2/4 digital microtiter shaker Resource Report Resource Website |
IKA: MTS 2/4 digital microtiter shaker (RRID:SCR_024726) | instrument resource | Special orbital shaker for shaking two or four microtiter plates. | Restricted | https://www.ika.com/en/Products-LabEq/Shakers-pg179/MTS-24-digital-microtiter-shaker-3208000/Technical-Data-cptd.html | SCR_024726 | MTS 2/4 digital microtiter shaker | 2026-09-05 06:34:40 | 0 | ||||||||||
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LinearSVC Resource Report Resource Website 1+ mentions |
LinearSVC (RRID:SCR_024741) | software application, software resource | Software application for linear support vector classification. Used in classification problems. | linear support vector classification, classification problems, | Free, Freely available | SCR_024741 | Linear Support Vector Classification | 2026-09-05 06:34:40 | 3 | ||||||||||
|
SingleCellNet Resource Report Resource Website 1+ mentions |
SingleCellNet (RRID:SCR_024742) | software application, software resource | Software tool to classify single cell RNA-Seq data across platforms and across species. | classify single cell RNA-Seq data, data across platforms and across species classification, | PMID:31377170 | Free, Available for download, Freely available | SCR_024742 | 2026-09-05 06:34:40 | 2 | ||||||||||
|
Rare and Atypical Diabetes Network Resource Report Resource Website 1+ mentions |
Rare and Atypical Diabetes Network (RRID:SCR_024732) | RADIANT | data or information resource, database, disease-related portal, portal, topical portal | Portal dedicated to characterizing, discovering and defining rare and atypical forms of diabetes. Network of universities, hospitals and clinics across the United States dedicated to better understanding atypical diabetes. Team of academic institutions and scientists collaborates with physicians and healthcare groups to identify those with atypical diabetes and learn more about their health. | USA, universities network, hospitals and clinics network, characterizing atypical diabetes, discovering atypical diabetes, defining atypical diabetes, rare and atypical forms of diabetes, atypical diabetes, |
is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Central Repository |
rare and atypical forms of diabetes, Diabetes | NIDDK | Restricted | SCR_024732 | Rare and Atypical DIAbetes NeTwork | 2026-09-05 06:34:40 | 3 | ||||||
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University of Massachusetts Lowell Nanofabrication Lab Core Facility Resource Report Resource Website |
University of Massachusetts Lowell Nanofabrication Lab Core Facility (RRID:SCR_024734) | access service resource, core facility, service resource | Core features 4,200 ft2 Class 100 clean room equipped with over 40 pieces of process and analytical instrumentation for complex research projects that require micro and nano scale fabrication. | ABRF, clean room, process and analytical instrumentation, micro and nano scale fabrication, |
is listed by: ABRF CoreMarketplace has parent organization: University of Massachusetts Lowell; Massachusetts; USA |
ABRF_2548 | https://coremarketplace.org/?FacilityID=2548&citation=1 | SCR_024734 | , University of Massachusetts Lowell UML - Nanofabrication Lab, UML - Nanofabrication Lab | 2026-09-05 06:34:40 | 0 |
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