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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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VIB Compound Screening Facility Resource Report Resource Website |
VIB Compound Screening Facility (RRID:SCR_012256) | VIB CSF, VIB-CSF | service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 15,2024. Compound screening facility that has several drug-like compound collections available that amount to a total of about 74,000 compounds and a human siRNA library that targets almost 8,000 genes. State-of-the-art liquid handling systems and detection technologies are available for screening in-house or custom collections in 96- or 384-well plate format. The platform is compatible with biochemical assays, cell-based assays in a broad range of cellular systems and assays in the model plant Arabidopsis thaliana. Its core activities consist of managing the VIB screening collections, assisting researchers in assay development / automation and performing high-throughput screenings. After hit clustering and selection, the VIB-CSF team can contribute in structure-activity analysis, IC50 measurements, cytotoxicity analysis, secondary screening for hit validation and counter screening for specificity analysis. |
is listed by: ScienceExchange has parent organization: VIB; Flanders; Belgium has parent organization: Ghent University; Ghent; Belgium |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_11102 | SCR_012256 | VIB Compound Screening Facility (CSF) | 2026-08-15 11:31:18 | 0 | ||||||||
|
Chinese University of Hong Kong; Hong Kong; China Resource Report Resource Website 10+ mentions |
Chinese University of Hong Kong; Hong Kong; China (RRID:SCR_003440) | CUHK | university | Public research university in Sha Tin, New Territories, Hong Kong. |
is parent organization of: ProbRNA is parent organization of: Type-III-Secretion-System related database is parent organization of: BSRD is parent organization of: Thermodynamic Database for Nucleic Acids is parent organization of: VFS is parent organization of: Virtual Multidisciplinary Stroke Care Clinic platform |
GRID: grid.10784.3a; ISNI: 0000 0004 1937 0482; Crossref Funder ID: 501100004853; Wikidata: Q15570; | http://www.cuhk.edu.hk/english/index.html | SCR_003440 | CUHK | 2026-08-15 11:30:29 | 46 | ||||||||
|
VPixx: VIEWPixx /3D Resource Report Resource Website 1+ mentions |
VPixx: VIEWPixx /3D (RRID:SCR_009646) | instrument resource | VIEWPixx /3D (VPixx Technologies) is a 1920x1080 resolution, 120 Hz, calibrated research-grade LCD monitor. It is designed for stereoscopic (3D) stimulus presentation and other high-dynamic vision-science paradigms where deterministic timing and synchronized I/O are critical. It pairs fast-response industrial TN LCD glass with a custom VPixx panel/video controller and a scanning direct-RGB LED backlight engineered to reduce motion artifacts/ghosting/crosstalk, and to improve spatial uniformity, while bypassing consumer “enhancement” processing for predictable experimental output. For stereoscopic workflows, VIEWPixx /3D supports 120 Hz frame-sequential 3D (60 Hz/eye) when used with 3DPixx active shutter glasses (RF emitter + glasses kit), and it can provide a dual-link DVI console output to mirror the participant's view without adding GPU load. The system is also a synchronized display + acquisition toolbox: integrated button-box interface, 24-channel TTL triggers, stereo audio I/O, and a full analog I/O subsystem are implemented on the same board as video control to enable microsecond-precision synchronization to video refresh—useful for EEG triggers, reaction-time tasks, and other timing-sensitive paradigms.In terms of bit depth, the VIEWPixx /3D is native 8 bits per colour, with support fot 10-bit resolution per RGB channel via custom video modes. | domain independent, experiment control, hardware, physiological recording, physiological stimulation, response monitoring, stimulus presentation, vision, visual stimulus | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | nlx_155973 | http://www.nitrc.org/projects/replacement_crt | http://www.vpixx.com/products/visual-stimulus-displays/viewpixx-3D.html | SCR_009646 | VIEWPixx / 3D, VIEWPixx/3D | 2026-08-15 11:30:42 | 1 | |||||||
|
William Harvey Research Limited Resource Report Resource Website |
William Harvey Research Limited (RRID:SCR_012574) | WHRL | service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 15,2024. A Contract research organization offering pre-clinical drug evaluation service specialising in models of cardiovascular and inflammatory diseases such as myocardial ischemia, haemorrhagic shock, endotoxaemia also inflammatory bowel disease (IBD), neutrophil migration, pulmonary fibrosis, systemic lupus erthematosus (SLE), adjuvant arthritis, collagen II arthritis, EAE and many more. |
is listed by: ScienceExchange has parent organization: Queen Mary University of London; London; United Kingdom |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_4961 | SCR_012574 | William Harvey Research Ltd | 2026-08-15 11:31:20 | 0 | ||||||||
|
Rasberry rat Resource Report Resource Website 1+ mentions |
Rasberry rat (RRID:SCR_023467) | software repository, software resource | Software Python platform for recording, converting, and uploading videos to cloud and for performing scheduled video recordings. Repository also includes wiki section with comprehensive guide to setting up Raspberry Pis for this purpose. Raspberry Pis are often cheaper than camcorder and can produce HD video. They are also equipped with infrared camera, making them ideal for recordings of animals that are active in low light conditions. | recording, converting, uploading, videos, video recordings, seting up and recording home cage videos, OpenBehavior, | is listed by: OpenBehavior | https://edspace.american.edu/openbehavior/project/raspberry_rat/, https://github.com/lapphe/raspberry_rat/wiki | SCR_023467 | Rasberry_rat | 2026-08-15 11:30:12 | 3 | |||||||||
|
PyPI Resource Report Resource Website 50+ mentions |
PyPI (RRID:SCR_023145) | PyPI | software repository, software resource | Software repository for Python programming language.Used to find and install software developed and shared by Python community. | Python, find and install Python software, Python community, | Free, Available for download, Freely available | SCR_023145 | Python Package Index | 2026-08-15 11:30:18 | 78 | |||||||||
|
HORNET CENTER FOR AUTONOMIC NERVE RECORDING AND STIMULATION SYSTEMS Resource Report Resource Website |
HORNET CENTER FOR AUTONOMIC NERVE RECORDING AND STIMULATION SYSTEMS (RRID:SCR_023681) | CARSS | software repository, software resource | Parylene MEA Fabrication is related to SPARC. Repository for standard fabrication procedure for Parylene C microelectrode arrays and similar devices. | Instrument, equipment, device, Parylene MEA Fabrication, microelectrode arrays, Parylene C microelectrode arrays |
is related to: SPARC Portal is related to: SPARC Request |
Free, Freely available | SCR_023681 | 2026-08-15 11:30:13 | 0 | |||||||||
|
FEATURE Resource Report Resource Website 10+ mentions |
FEATURE (RRID:SCR_002648) | d visualization software, modeling software | A suite of automated tools that examine biological molecules and produces useful representations of the key biophysical and biochemical features of these structures that are critical for understanding function. The utility of this system extends from medical / pharmaceutical applications (model-based drug design, comparing pharmacological activities) to industrial applications (understanding structural stability, protein engineering). The FEATURE code is made available, without too much support, to any interested scientists. Audience: Researchers interested in identifying functional sites in protein structures. Long Term Goals and Related Uses: Enable improved functional site prediction. | functional site, function annotation, calcium binding site, protein microenvironment, structural bioinformatics, structure, protein classification, bayesian inference, support vector machine, model |
is listed by: Biositemaps has parent organization: Simtk.org |
Free, Available for download, Freely available | nif-0000-23304 | SCR_002648 | 2026-08-15 11:30:28 | 35 | |||||||||
|
Renishaw WiRE software Resource Report Resource Website 10+ mentions |
Renishaw WiRE software (RRID:SCR_026513) | software resource | Renishaw windows-based Raman Environment, WiRE, software can control acquisition of Raman data and provide users with dedicated data processing and analysis options. | Renishaw, acquisition of Raman data, data processing and analysis, | Restricted | https://info.renishaw.com/rs/822-DNR-415/images/BR012_EN_-02-B_WiRE_software.pdf | SCR_026513 | 2026-08-15 11:32:47 | 10 | ||||||||||
|
Hamamatsu: NanoZoomer-XR Digital slide scanner Resource Report Resource Website 1+ mentions |
Hamamatsu: NanoZoomer-XR Digital slide scanner (RRID:SCR_026520) | instrument resource | High-resolution digital slide scanner designed for wide-field imaging of tissue samples. It captures high-quality digital images of microscope slides at up to 40x optical magnification. NanoZoomer XR scanner is capable of capturing images with a maximum resolution of 0.23 microns per pixel. | digital slide scanner, wide-field imaging, tissue samples imaging, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026520.pdf | SCR_026520 | NanoZoomer XR scanner | 2026-08-15 11:32:48 | 2 | ||||||||||
|
Tecan: Infinite M Plex microplate reader Resource Report Resource Website 1+ mentions |
Tecan: Infinite M Plex microplate reader (RRID:SCR_026522) | instrument resource | Multimode microplate reader with monochromator optics. Offers free wavelength selection and scanning capabilities. Used for all standard absorbance, fluorescence and luminescence assays. | Multimode microplate reader, monochromator optics, standard absorbance assays, fluorescence assays, luminescence assays, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026522.pdf | Model_Number_Infinite_M_Plex | SCR_026522 | 2026-08-15 11:32:41 | 6 | ||||||||||
|
ECHO: Revolve Microscope Resource Report Resource Website 1+ mentions |
ECHO: Revolve Microscope (RRID:SCR_026523) | instrument resource | 4-in-1 digital hybrid microscope, combining four microscopes into one. ECHO Revolve is a hybrid microscope that can be used for viewing glass slides and live samples in fluidic chambers. It can be used for upright or inverted observation methods. | digital hybrid microscope, viewing glass slides and live samples, fluidic chambers, upright or inverted observation, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026523.pdf | Model_Number_Revolve | SCR_026523 | 2026-08-15 11:32:48 | 9 | ||||||||||
|
Fluidigm: CyTOF 2 mass cytometer Resource Report Resource Website |
Fluidigm: CyTOF 2 mass cytometer (RRID:SCR_026551) | instrument resource | Time-of-Flight mass spectrometer for high-speed acquisition of highly multi-parametric single cell data. Simultaneously resolves multiple parameters with minimal signal overlap, providing insights into the functional and phenotypic complexity of biological systems at the single-cell level. Analyzes cells labeled with panel of reagents conjugated to stable metal isotopes using time-of-flight mass cytometry technology. Includes over 120 detection channels and 35 Maxpar metal probes. | Time-of-Flight mass spectrometer, Fluidigm, high-speed acquisition, multi-parametric single cell data, time-of-flight mass cytometry technology, 120 detection channels, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026551.pdf | Model_Number_CyTOF_2 | SCR_026551 | Fluidigm CyTOF 2 | 2026-08-15 11:32:48 | 0 | |||||||||
|
Thermo Fisher: Invitrogen: iBright CL1500 Imaging System Resource Report Resource Website 1+ mentions |
Thermo Fisher: Invitrogen: iBright CL1500 Imaging System (RRID:SCR_026565) | instrument resource | System supports the main imaging applications of chemiluminescent and colorimetric western blots, in addition to fluorescent stained nucleic acid gels, fluorescent stained protein gels, colorimetric stained protein gels, and colorimetric membrane stains. | chemiluminescent western blot imaging, colorimetric western blot, western blot, imaging, luorescent stained nucleic acid gels, fluorescent stained protein gels, colorimetric stained protein gels, colorimetric membrane stains, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026565.pdf | Model_Number_iBright_CL1500 | SCR_026565 | iBright CL1500 Imaging System | 2026-08-15 11:32:43 | 9 | |||||||||
|
Meso-Py Resource Report Resource Website |
Meso-Py (RRID:SCR_026530) | instrument resource | Cost-effective, compact foot-print, and open-source Raspberry Pi-based widefield imaging system. Used for close-proximity dual-brain cortical mesoscale functional-imaging to simultaneously observe activity in two head-fixed animals in staged social touch-like interaction. We provide all schematics, code, and protocols for a rail system where head-fixed mice are brought together to a distance where the macrovibrissae of each mouse make contact. | compact foot-print, Raspberry Pi-based widefield imaging system, close-proximity, dual-brain, cortical mesoscale functional imaging, | PMID:38053472 | SCR_026530 | 2026-08-15 11:32:35 | 0 | |||||||||||
|
Bruker: amaZon Speed ETD mass spectrometer Resource Report Resource Website |
Bruker: amaZon Speed ETD mass spectrometer (RRID:SCR_026526) | instrument resource | Ion trap mass spectrometer with electron transfer dissociation capabilities. Sets analytical standard for proteomics and small molecule applications. | Mass Spectrometry, Ion Trap, mass spectrometer, proteomics, small molecule applications, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026526.pdf | SCR_026526 | amaZon Speed ETD | 2026-08-15 11:32:48 | 0 | ||||||||||
|
Bruker: rapifleX Resource Report Resource Website 1+ mentions |
Bruker: rapifleX (RRID:SCR_026525) | instrument resource | Bruker MALDI-TOF mass spectrometry system. Enables time critical applications and faster decision making processes. | Mass Spectrometry, MALDI, MALDI-TOF, mass spectrometry, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026525.pdf | SCR_026525 | rapifleX | 2026-08-15 11:32:35 | 2 | ||||||||||
|
Shimadzu: LCMS-8060NX Triple Quad LC-MS/MS mass spectrometer Resource Report Resource Website |
Shimadzu: LCMS-8060NX Triple Quad LC-MS/MS mass spectrometer (RRID:SCR_026527) | instrument resource | Triple Quadrupole Mass Spectrometer is liquid chromatograph mass spectrometer (LCMS) for fast, accurate detection, to quantify components of sample or to analyze their structure with increased specificity and sensitivity. | Triple Quadrupole Mass Spectrometer, liquid chromatograph mass spectrometer, sample detection, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026527.pdf | Model_Number_LCMS-8060NX | https://www.shimadzu.com/an/sites/shimadzu.com.an/files/pim/pim_document_file/brochures/11397/c146-e410.pdf | SCR_026527 | , LCMS-8060NX Triple Quad LC-MS/MS, Shimadzu LCMS-8060NX, LCMS-8060NX | 2026-08-15 11:32:41 | 0 | ||||||||
|
Shimadzu: Nexera HPLC/UHPLC Column Oven - CTO-40S Resource Report Resource Website |
Shimadzu: Nexera HPLC/UHPLC Column Oven - CTO-40S (RRID:SCR_026529) | instrument resource | Oven used to control the temperature of the column in a liquid chromatography LC system.CTO-40S Slim Line column oven is ideal for saving space while maintaining excellent thermal stability. | temperature column control, oven, slim oven, liquid chromatography LC system temperature control, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026529.pdf | Model_Number_CTO-40S | SCR_026529 | Nexera HPLC UHPLC Column Oven - CTO-40S | 2026-08-15 11:32:41 | 0 | |||||||||
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Bruker: timsTOF SCP mass spectrometer Resource Report Resource Website 1+ mentions |
Bruker: timsTOF SCP mass spectrometer (RRID:SCR_026542) | instrument resource | The timsTOF SCP (single-cell proteomics) is mass spectrometer from Bruker. Ultra-high sensitivity instrument for quantitative single cell biology research with unbiased, deep single-cell 4D-Proteomics, immunopeptidomics, epiproteomics and PTM analysis. It features an additional separation in the tims cell where ions get separated according to their ion mobility, leading to collision cross-section values.Allows the analysis of hundreds of samples with minimal sample load (<200 ng) at sequencing speeds exceeding 100 Hz. | single-cell proteomics, ultra-high sensitivity mass spectrometer, single-cell 4D-Proteomics, immunopeptidomics, epiproteomics, PTM analysis, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_026542.pdf | Model_Number_timsTOF_SCP | SCR_026542 | Bruker timsTOF SCP, timsTOF SCP | 2026-08-15 11:32:48 | 1 |
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