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URL: https://github.com/broadinstitute/warp/tree/master/pipelines/skylab/slideseq
Proper Citation: Slide-seq Pipeline (RRID:SCR_023379)
Description: Software pipeline developed in collaboration with BRAIN Initiative Cell Census Network and BRAIN Initiative Cell Atlas Network. Supports processing of spatial transcriptomic data generated with Slide-seq commercialized as Curio Seeker assay.
Synonyms: Slide-seq, slideseq, SlideSeq, SlideSeq Pipeline
Resource Type: data processing software, data analysis software, software application, software resource
Defining Citation: PMID:30923225
Keywords: single cell data, spatial transcriptomics, barcode correction, reads alignment, aligns reads to genome,
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Source: SciCrunch Registry
Slide-seq Pipeline is part of the following organization(s):
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
Email: info_at_ dknet.org
