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URL: http://www.broadinstitute.org/software/syzygy/
Proper Citation: SYZYGY (RRID:SCR_002157)
Description: A targeted sequencing post processing analysis software tool that allows: 1. SNP and indel detection; 2. Allele frequency estimation; 3. Single-marker association test; 4. Group-wise marker test association; 5. Experimental QC summary (%dbSNP, Ts/Tv, Ns/S); 6. Power to detect variant. (entry from Genetic Analysis Software)
Abbreviations: Syzygy
Synonyms: Syzygy - SNP and indel calling for pooled and individual targeted resequencing studies
Resource Type: software resource, software application
Defining Citation: PMID:21983784
Keywords: gene, genetic, genomic, variant calling, snp, indel, allele frequency, single-marker association, group-wise marker, quality control, variant
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant 2U24DK097771-09.
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