The 4DN Data Portal - Data, Resources and Tools to Help Elucidate Nuclear Organization in Space and Time

Presenter: Andrew Schroeder, PhD. Project Manager & Senior Data Curator, 4D Nucleome Data Coordination and Integration Center (4DN-DCIC), Park Lab, Department of Biomedical Informatics, Harvard Medical School

Abstract

The Common Fund 4D Nucleome program, currently in its 9th year, is a consortium of researchers that aims to understand the principles behind the three-dimensional organization of the nucleus and how this organization can change over time to affect a variety of cellular processes. The 4DN Data Portal (data.4dnucleome.org) is an expanding resource hosting data generated by the 4DN Network and other reference nucleomics data sets. The portal provides tools for search, exploration, visualization, and download. An overview of the data portal, highlighting available data, how it can be found, visualized and used for analyses will be presented.

The top 3 key questions that the 4DN data portal can answer:

1. Are there significant sites of long-range chromatin contacts near my gene or region of interest?

2. What omics datasets are available for my tissue of interest?

3. Are there imaging datasets available that are relevant to my tissue of interest?

Dial-in Information: 
https://uchealth.zoom.us/meeting/register/tZIodu-qpzIqEtReuoLvGNCfMoxa4PfsxsXb

Date/Time: Friday, May 10, 2024, 11 am - 12 pm PT