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Source
Gene Ontology Tools
Collection of tools developed by GO Consortium and by third parties. Tools are listed by category or alphabetically and continue to be improved and expanded.
Details
- Resource Type: Resource, software resource, software repository, data or information resource, catalog, database
- Keywords: registry, annotation browser, annotation search engine, annotation visualization, ontology, annotation editor, database, data warehouse, software library, statistical analysis, slimmer-type tool, term enrichment, text mining, protein interaction, functional similarity, semantic similarity, analysis, annotation, visualization, editor
- Resource ID: SCR_006941
- Proper Citation: (Gene Ontology Tools, RRID:SCR_006941)
- Parent Organization: Gene Ontology
- Related Condition:
- Funding Agency:
- Relation: listed by: NIF Data Federation, lists: GOALIE, GenNav, High-Throughput GoMiner, Onto-Design, Avadis, GONUTS, PiNGO, TM4 Microarray Software Suite - TIGR MultiExperiment Viewer, FunSimMat, BioPerl, Database for Annotation Visualization and Integrated Discovery, GOToolBox Functional Investigation of Gene Datasets, StRAnGER, Short Time-series Expression Miner (STEM), GORetriever, Gene Ontology Browsing Utility (GOBU), GeneTools, GOSlimViewer, go-moose, Network Ontology Analysis, OBO-Edit, Onto-Compare, Onto-Express, OntoVisT, STRAP, CGAP GO Browser, COBrA, Gene Class Expression, GeneInfoViz, GOfetcher, GoFish, GOProfiler, GOanna, Manatee, Pandora - Protein ANnotation Diagram ORiented Analysis, TAIR Keyword Browser, Wandora, GeneMANIA, GOTaxExplorer, go-db-perl, Onto-Miner, Onto-Translate, ToppGene Suite , DBD - Slim Gene Ontology, go-perl, ONTO-PERL, OWLTools, Blip: Biomedical Logic Programming, OWL API, CLENCH, BiNGO: A Biological Networks Gene Ontology tool, CateGOrizer, FuSSiMeG: Functional Semantic Similarity Measure between Gene-Products, ProteInOn, GeneMerge, GraphWeb, ClueGO, CLASSIFI - Cluster Assignment for Biological Inference, GOHyperGAll, FuncAssociate: The Gene Set Functionator, GOdist, FuncExpression, FunCluster, FIVA - Functional Information Viewer and Analyzer, GARBAN, GOEx - Gene Ontology Explorer, SGD Gene Ontology Slim Mapper, GOArray, GoSurfer, GOtcha, MAPPFinder, GoAnnotator, MetaGeneProfiler, OntoGate, ProfCom - Profiling of complex functionality, SerbGO, SOURCE, Ontologizer, THEA - Tools for High-throughput Experiments Analysis, Generic GO Term Mapper, GREAT: Genomic Regions Enrichment of Annotations Tool, GoBean - a Java application for Gene Ontology enrichment analysis, TXTGate, GO-Module, IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures, G-SESAME - Gene Semantic Similarity Analysis and Measurement Tools, Expression Profiler, GOChase, Whatizit, REViGO, WEGO - Web Gene Ontology Annotation Plot, Blast2GO, InterProScan, PubSearch, GO Online SQL Environment (GOOSE), Gene Ontology For Functional Analysis (GOFFA), MGI GO Browser, GOEAST - Gene Ontology Enrichment Analysis Software Toolkit, Ontology Lookup Service, WebGestalt: WEB-based GEne SeT AnaLysis Toolkit, G:Profiler, OwlSim, GOrilla: Gene Ontology Enrichment Analysis and Visualization Tool, FastSemSim, RamiGO, GeneCodis, FunSpec, FunNet - Transcriptional Networks Analysis, agriGO, GOblet, DynGO, SeqExpress, ProbeExplorer, GOstat, Onto-Express To Go (OE2GO), Tk-GO, Spotfire, GOMO - Gene Ontology for Motifs, GFINDer: Genome Function INtegrated Discoverer, Agile Protein Interactomes DataServer, elk-reasoner, Flash Gviewer, L2L Microarray Analysis Tool, OnEx - Ontology Evolution Explorer, Semantic Measures Library, AmiGO, Babelomics, T-profiler, QuickGO, FSST - Functional Similarity Search Tool, GoPubMed, Bioconductor, ErmineJ, Comparative Toxicogenomics Database, LexGrid, Candidate Genes to Inherited Diseases, EGAN: Exploratory Gene Association Networks, Generic GO Term Finder, Integrated Manually Extracted Annotation, EASE: the Expression Analysis Systematic Explorer
- Reference:
- Website Status: Last checked down
- Alternate IDs: nlx_146273
- Alternate URLs: https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_146273-1
- Old URLs: http://www.geneontology.org/GO.tools.shtml
- v_uuid: 966cf5e2-c4a5-5ec6-9046-3a3c277f25c3
