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| Name | Authors | DOI | Group |
Summary |
Associated Publications |
RRIDs used | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Centrifuged Plaque Assay Sample Steps Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dep3dm | VERVE Net, Sullivan Lab | For Transcriptomics During One-Step Growth Curves for Cellulophaga Phages protocol. | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Centrifuged Plaque Assay Sample Steps. protocols.io dx.doi.org/10.17504/protocols.io.dep3dm | 2021-03-29 03:10:51 | |||
|
Titration of AmPure XP Beads for Removal of Fragments Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c52y8d | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Titration of AmPure XP Beads for Removal of Fragments . protocols.io dx.doi.org/10.17504/protocols.io.c52y8d | 2021-03-29 03:10:45 | ||||
|
Cellulophaga growth reading Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dpa5id | VERVE Net, Sullivan Lab | For One-step growth curves for Cellulophaga phages protocol and Transcriptomics During One-Step Growth Curves for Cellulophaga Phages protocol. | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Cellulophaga growth reading. protocols.io dx.doi.org/10.17504/protocols.io.dpa5id | 2021-03-29 03:10:55 | |||
|
16S Universal Bacterial PCR Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dfr3m5 | VERVE Net, Sullivan Lab | Matthew Sullivan Lab | 1 | 2016 | Matthew Sullivan 2016. 16S Universal Bacterial PCR. protocols.io dx.doi.org/10.17504/protocols.io.dfr3m5 | 2021-03-29 03:10:29 | ||||
|
Transcriptomics During One-Step Growth Curves for Cellulophaga Phages Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dem3c5 | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Transcriptomics During One-Step Growth Curves for Cellulophaga Phages. protocols.io dx.doi.org/10.17504/protocols.io.dem3c5 | 2021-03-29 03:10:30 | ||||
|
DNA Precipitation Protocol Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c34yqv | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. DNA Precipitation Protocol. protocols.io dx.doi.org/10.17504/protocols.io.c34yqv | 2021-03-29 03:08:35 | ||||
|
Fixation of Planktonic Samples Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c3ayid | VERVE Net, Sullivan Lab | Modified after Glöckner et al. 1999 | Matthe Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Fixation of Planktonic Samples. protocols.io dx.doi.org/10.17504/protocols.io.c3ayid | 2021-03-29 03:08:42 | |||
|
Plating Prochlorococcus and Synechococcus strains in top agarose for plaque assays Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c3vyn5 | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Plating Prochlorococcus and Synechococcus strains in top agarose for plaque assays. protocols.io dx.doi.org/10.17504/protocols.io.c3vyn5 | 2021-03-29 03:09:22 | ||||
|
g23 T4-type (myovirus) PCR Protocol Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dfq3mv | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. g23 T4-type (myovirus) PCR Protocol. protocols.io dx.doi.org/10.17504/protocols.io.dfq3mv | 2021-03-29 03:09:27 | ||||
|
Amplification of phage genes from lysates and environmental samples Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.djn4md | VERVE Net, Sullivan Lab | From Sullivan M., Lindell D., Lee J., Thompson L., Bielawski J., Chisholm S. Prevalence and Evolution of Core Photosystem II Genes in Marine Cyanobacterial Viruses and Their Hosts.PLOS Biology, 2006 4(8):e234. Please see the published manuscript for additional information. | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Amplification of phage genes from lysates and environmental samples. protocols.io dx.doi.org/10.17504/protocols.io.djn4md | 2021-03-29 03:11:57 | |||
|
Cesium Chloride Gradients Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c7dzi5 | VERVE Net, Sullivan Lab | The usefulness of cesium chloride (CsCl) step gradients and continuous gradients for the separation of viruses is based on the differing buoyant densities of viruses, bacteria, and extracellular debris. This protocol provides a method for Cesium Chloride and DNA Extraction for Viruses (See guidelines for DNA Extraction). | Matthew Sullivan Lab | 1 | 2016 | Matthew Sullivan 2016. Cesium Chloride Gradients. protocols.io dx.doi.org/10.17504/protocols.io.c7dzi5 | 2021-03-29 03:08:13 | |||
|
Centrifuged Sample Steps Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.ddj24m | VERVE Net, Sullivan Lab | For One-step growth curves for Cellulophaga phages protocol. | Matthew Sullivan Lab, University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Centrifuged Sample Steps. protocols.io dx.doi.org/10.17504/protocols.io.ddj24m | 2021-03-29 03:08:16 | |||
|
Phage Buffer Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c5ey3d | VERVE Net, Sullivan Lab | Can be used for diluting or resuspending phage preparations. | Matthew Sullivan Lab, University of Arizona, The Ohio State University | 1 | 2015 | Matthew Sullivan 2015. Phage Buffer. protocols.io dx.doi.org/10.17504/protocols.io.c5ey3d | 2021-03-29 03:08:19 | |||
|
Host Range Protocols Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.dew3fd | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Host Range Protocols. protocols.io dx.doi.org/10.17504/protocols.io.dew3fd | 2021-03-29 03:08:17 | ||||
|
Working Bead Solution Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c84zyv | VERVE Net, Sullivan Lab | For use in Wet-mount Method for Enumeration of Aquatic Viruses | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Working Bead Solution. protocols.io dx.doi.org/10.17504/protocols.io.c84zyv | 2021-03-29 03:08:24 | |||
|
Media Recipes Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.deq3dv | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. Media Recipes. protocols.io dx.doi.org/10.17504/protocols.io.deq3dv | 2021-03-29 03:11:47 | ||||
|
DNA Extraction Protocol Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c32yqd | VERVE Net, Sullivan Lab | Matthew Sullivan Lab, University of Arizona/Ohio State University | 1 | 2016 | Matthew Sullivan 2016. DNA Extraction Protocol. protocols.io dx.doi.org/10.17504/protocols.io.c32yqd | 2021-03-29 03:13:26 | ||||
|
MTN100 with 1x NaCl Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.def3bm | VERVE Net, Sullivan Lab | This mixture is is used with Cesium Chloride Dialysis for Viruses | University of Arizona, Ohio State University | 1 | 2016 | Matthew Sullivan 2016. MTN100 with 1x NaCl. protocols.io dx.doi.org/10.17504/protocols.io.def3bm | 2021-03-29 03:13:30 | |||
|
CsCl purified phage lysate, Proteinase K, SDS Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c68zhv | VERVE Net, Sullivan Lab | This mixture is used for the DNA Extraction Protocol. | Matthew Sullivan Lab | 1 | 2016 | Matthew Sullivan 2016. CsCl purified phage lysate, Proteinase K, SDS. protocols.io dx.doi.org/10.17504/protocols.io.c68zhv | 2021-03-29 03:13:34 | |||
|
Screening Recombinant Clones by PCR Resource Report Resource Website |
Matthew Sullivan | 10.17504/protocols.io.c48yzv | VERVE Net, Sullivan Lab | Matthew Sullivan Lab | 1 | 2016 | Matthew Sullivan 2016. Screening Recombinant Clones by PCR. protocols.io dx.doi.org/10.17504/protocols.io.c48yzv | 2021-03-29 03:13:44 |
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