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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00051907
Source Database: WormBase (WB)
Affected Genes: WBGene00001072(dpy-10)|WBGene00003514(myo-2)|WBGene00004496(rps-27)|WBGene00006787(unc-52)|WBGene00006789(unc-54)|WBGene00013144(pno-1)
Genomic Alteration: WBGene00001072(dpy-10), WBGene00003514(myo-2), WBGene00004496(rps-27), WBGene00006787(unc-52), WBGene00006789(unc-54), WBGene00013144(pno-1)
Availability: unknown
Source References: EMPTY
Synonyms: pno-1(gk5573[loxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + loxP])/mnC1 [dpy-10(e128) unc-52(e444) umnIs37] II.
Notes: Made_by: Morgan Zaic|"umnIs37 [myo-2p::mKate2 + NeoR, II: 11755713 (intergenic)] II. Pick viable fertile GFP+ and mKate2+ animals to maintain. Apparent homozygous lethal or sterile deletion balanced over mKate2 tagged mnC1. Heterozygotes are wild-type GFP+ mKate2+, and segregate wild-type GFP+ mKate2+, GFP+ non-mKate2 (gk5573 homozygotes), and paralysed DpyUnc mKate2+ (mnC1). Derived from parental strains VC4502 and CGC48. gk5573 is a 3472 bp deletion with Calarco/Colaiacovo selection cassette conferring myo-2 GFP and G418 resistance inserted at break. Left flanking sequence: GACTGAATGGGTGAAGGGGCACTATATTGG. Right flanking sequence: TTTGGAGCAGTGTCCAAATTTTGCTCGAGA. Please reference Au et al., G3 9(1): 135-144 2019 in any work resulting from use of this mutation."
Proper citation: RRID:WB-STRAIN:WBStrain00051907 Copy
http://www.wormbase.org/db/get?name=WBStrain00051905
Source Database: WormBase (WB)
Affected Genes: WBGene00001072(dpy-10)|WBGene00003514(myo-2)|WBGene00004496(rps-27)|WBGene00004723(sap-49)|WBGene00006787(unc-52)|WBGene00006789(unc-54)
Genomic Alteration: WBGene00001072(dpy-10), WBGene00003514(myo-2), WBGene00004496(rps-27), WBGene00004723(sap-49), WBGene00006787(unc-52), WBGene00006789(unc-54)
Availability: unknown
Source References: EMPTY
Synonyms: sap-49(gk5542[loxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + loxP])/mnC1 [dpy-10(e128) unc-52(e444) umnIs37] II.
Notes: Made_by: Morgan Zaic|"umnIs37 [myo-2p::mKate2 + NeoR, II: 11755713 (intergenic)] II. Pick viable fertile GFP+ and mKate2+ animals to maintain. Apparent homozygous lethal or sterile deletion balanced over mKate2 tagged mnC1. Heterozygotes are wild-type GFP+ mKate2+, and segregate wild-type GFP+ mKate2+, GFP+ non-mKate2 (gk5542 homozygotes), and paralysed DpyUnc mKate2+ (mnC1). Derived from parental strains VC4469 and CGC48. gk5542 is a 1365 bp deletion with Calarco/Colaiacovo selection cassette conferring myo-2 GFP and G418 resistance inserted at break. Left flanking sequence: GGTGACTAATTAGTTTTGGTGTGTCCTCCG. Right flanking sequence: GACGTTCCCGAATCAACATCTCTCATGATT. Please reference Au et al., G3 9(1): 135-144 2019 in any work resulting from use of this mutation."
Proper citation: RRID:WB-STRAIN:WBStrain00051905 Copy
http://www.wormbase.org/db/get?name=WBStrain00051854
Source Database: WormBase (WB)
Affected Genes: WBGene00001457(flp-14)
Genomic Alteration: WBGene00001457(flp-14)
Availability: unknown
Source References: PMID:37935195
Synonyms: flp-14(syb3323[flp-14::T2A::3xNLS::GFP]) III.
Notes: Endogenous flp-14 locus tagged with 3xNLS::GFP reporter. Reference: Sun H & Hobert O. Nature. 2021 Dec;600(7887):93-99. doi: 10.1038/s41586-021-04071-4. PMID: 34759317.|"Supplementary_genotype flp-14(syb3323[flp-14::T2A::3xNLS::GFP]) III"
Proper citation: RRID:WB-STRAIN:WBStrain00051854 Copy
http://www.wormbase.org/db/get?name=WBStrain00051859
Source Database: WormBase (WB)
Affected Genes: WBGene00013347(nova-1)
Genomic Alteration: WBGene00013347(nova-1)
Availability: unknown
Source References: EMPTY
Synonyms: nova-1(syb4373[nova-1::GFP]) V.
Notes: GFP tag inserted at the C-terminus of the endogenous nova-1 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341|"GFP tag inserted at the C-terminus of the endogenous nova-1 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Made_by: SUNY Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00051859 Copy
http://www.wormbase.org/db/get?name=WBStrain00051858
Source Database: WormBase (WB)
Affected Genes: WBGene00020126(flp-26)
Genomic Alteration: WBGene00020126(flp-26)
Availability: unknown
Source References: PMID:37935195
Synonyms: flp-26(syb3588[flp-26::T2A::3xNLS::GFP]) X.
Notes: Endogenous flp-26 locus tagged with 3xNLS::GFP reporter. Reference: Sun H & Hobert O. Nature. 2021 Dec;600(7887):93-99. doi: 10.1038/s41586-021-04071-4. PMID: 34759317.|"Supplementary_genotype flp-26(syb3588[flp-26::T2A::3xNLS::GFP]) X"
Proper citation: RRID:WB-STRAIN:WBStrain00051858 Copy
http://www.wormbase.org/db/get?name=WBStrain00051857
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: eif-2D(syb3432[(delta)SUI1 domain +3xFLAG]) II.
Notes: Endogenous eif-2D locus tagged with 3xFLAG. The SUI1 domain of the endogenous EIF-2D locus has been deleted and replaced with 3xFLAG via CRISPR/Cas9 gene editing. Reference: Sonobe Y, et al. Nat Commun. 2021 Oct 15;12(1):6025. doi: 10.1038/s41467-021-26303-x. PMID: 34654821|"Made_by: Yoshifumi Sonobe"
Proper citation: RRID:WB-STRAIN:WBStrain00051857 Copy
http://www.wormbase.org/db/get?name=WBStrain00051841
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Source References: EMPTY
Synonyms: pha-1(e2123) III; otEx7567.
Notes: Made_by: Tessa Tekieli|"otEx7567[nlp-56p::GFP + pha-1(+)]. RMG neurons are labeled with GFP. Can be used to isolate RMG by FACS. Used by CeNGEN project for RNA-Seq (https:"
Proper citation: RRID:WB-STRAIN:WBStrain00051841 Copy
http://www.wormbase.org/db/get?name=WBStrain00051840
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: otIs837.
Notes: Made_by: Marie Gendrel, Rebecca Stephen|"otIs837 [unc-25(prom3)(del1)::GFP]. RME neurons are labeled with GFP. Can be used to isolate RME by FACS. Used by CeNGEN project for RNA-Seq (https:"
Proper citation: RRID:WB-STRAIN:WBStrain00051840 Copy
http://www.wormbase.org/db/get?name=WBStrain00051843
Source Database: WormBase (WB)
Affected Genes: WBGene00000438(ceh-14)|WBGene00004364(ric-4)
Genomic Alteration: WBGene00000438(ceh-14), WBGene00004364(ric-4)
Availability: unknown
Source References: EMPTY
Synonyms: ric-4(syb2878[ric-4::T2A::3xNLS::GFP]) V; ceh-14(ot1185) X.
Notes: Made_by: Eduardo Leyva-Diaz|"Null allele of ceh-14 generated by gRNAs targeted to the first and last exons, resulting in a 4056 bp deletion from +40 to +4096 relative to the start of the ORF. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Null allele of ceh-14 generated by gRNAs targeted to the first and last exons, resulting in a 4056 bp deletion from +40 to +4096 relative to the start of the ORF. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"
Proper citation: RRID:WB-STRAIN:WBStrain00051843 Copy
http://www.wormbase.org/db/get?name=WBStrain00051847
Source Database: WormBase (WB)
Affected Genes: WBGene00002092(ins-9)
Genomic Alteration: WBGene00002092(ins-9)
Availability: unknown
Source References: PMID:37935195
Synonyms: ins-9(syb2616[ins-9::T2A::3xNLS::GFP]) X.
Notes: Endogenous ins-9 locus tagged with 3xNLS::GFP reporter. Reference: Sun H & Hobert O. Nature. 2021 Dec;600(7887):93-99. doi: 10.1038/s41586-021-04071-4. PMID: 34759317.|"Supplementary_genotype ins-9(syb2616[ins-9::T2A::3xNLS::GFP]) X"
Proper citation: RRID:WB-STRAIN:WBStrain00051847 Copy
http://www.wormbase.org/db/get?name=WBStrain00051838
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: otIs736; evIs111.
Notes: Made_by: Maryam Majeed (Hobert Lab)|"otIs736 [cat-4p::mCherry + rol-6(su1006)]. evIs111 [F25B3.3::GFP + dpy-20(+)]. Rollers. Pan-neural GFP expression. The two HSN neurons are marked with both GFP and mCherry. Can be used to isolate HSN by FACS. Used by CeNGEN project for RNA-Seq (https:"
Proper citation: RRID:WB-STRAIN:WBStrain00051838 Copy
http://www.wormbase.org/db/get?name=WBStrain00051839
Source Database: WormBase (WB)
Affected Genes: WBGene00015934(ceh-48)
Genomic Alteration: WBGene00015934(ceh-48)
Availability: unknown
Source References: EMPTY
Synonyms: ceh-48(ot1125[ceh-48::GFP]) IV.
Notes: GFP tag inserted at the C-terminus of the endogenous ceh-48 locus by CRISPR. Allele obtained using Cas9-sgRNA ribonucleoprotein complex, following Dokshin et al, 2018 method. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341|"GFP tag inserted at the C-terminus of the endogenous ceh-48 locus by CRISPR. Allele obtained using Cas9-sgRNA ribonucleoprotein complex, following Dokshin et al, 2018 method. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Made_by: Eduardo Leyva-Diaz"
Proper citation: RRID:WB-STRAIN:WBStrain00051839 Copy
http://www.wormbase.org/db/get?name=WBStrain00051938
Source Database: WormBase (WB)
Affected Genes: WBGene00012317(ztf-6)
Genomic Alteration: WBGene00012317(ztf-6)
Availability: unknown
Source References: EMPTY
Synonyms: ztf-6(st12301[ztf-6::TY1::EGFP::3xFLAG]) I.
Notes: eGFP and 3xFLAG tags inserted into endogenous locus by CRISPR/Cas9.|"Made_by: DKV/LS/CK"
Proper citation: RRID:WB-STRAIN:WBStrain00051938 Copy
http://www.wormbase.org/db/get?name=WBStrain00051990
Source Database: WormBase (WB)
Affected Genes: WBGene00003628(nhr-35)
Genomic Alteration: WBGene00003628(nhr-35)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; nhr-35(dev156([nhr-35::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of nhr-35 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051990 Copy
http://www.wormbase.org/db/get?name=WBStrain00051994
Source Database: WormBase (WB)
Affected Genes: WBGene00001310(end-1)
Genomic Alteration: WBGene00001310(end-1)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; end-1(dev162([end-1::mNeonGreen]) V.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of end-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051994 Copy
http://www.wormbase.org/db/get?name=WBStrain00051993
Source Database: WormBase (WB)
Affected Genes: WBGene00015981(elt-7)
Genomic Alteration: WBGene00015981(elt-7)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; elt-7(dev159([mNeonGreen::elt-7]) V.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of elt-7 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051993 Copy
http://www.wormbase.org/db/get?name=WBStrain00051992
Source Database: WormBase (WB)
Affected Genes: WBGene00000899(daf-3)
Genomic Alteration: WBGene00000899(daf-3)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; daf-3(dev163([daf-3::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of daf-3 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051992 Copy
http://www.wormbase.org/db/get?name=WBStrain00051998
Source Database: WormBase (WB)
Affected Genes: WBGene00004765(sel-8)
Genomic Alteration: WBGene00004765(sel-8)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; sel-8(dev176([sel-8::mNeonGreen]) III.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of sel-8 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051998 Copy
http://www.wormbase.org/db/get?name=WBStrain00052032
Source Database: WormBase (WB)
Affected Genes: WBGene00000451(ceh-30)
Genomic Alteration: WBGene00000451(ceh-30)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; ceh-30(dev253([mNeonGreen::ceh-30]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ceh-30 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052032 Copy
http://www.wormbase.org/db/get?name=WBStrain00052030
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:34312566
Synonyms: Y73E7A.1(dev233([Y73E7A.1::mNeonGreen]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of Y73E7A.1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052030 Copy
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