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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00051599
Source Database: WormBase (WB)
Affected Genes: WBGene00002245(lag-1)
Genomic Alteration: WBGene00002245(lag-1)
Availability: unknown
Source References: EMPTY
Synonyms: ieSi64 II; lag-1(oz536oz537[lag-1::degron::3xHA]) IV.
Notes: ieSi64 [gld-1p::TIR1::mRuby::gld-1 3'UTR + Cbr-unc-119(+)] II. Essentially wild-type when maintained on NGM plates. All germline stem cells enter into meiosis when treated with Auxin (1mM). References: Chen J, et al. PLoS Genet. 2020 Mar 20;16(3):e1008650. PMID: 32196486. Chen J, et al. 2020 MicroPublication (https:|"Made_by: Jian Chen"
Proper citation: RRID:WB-STRAIN:WBStrain00051599 Copy
http://www.wormbase.org/db/get?name=WBStrain00051596
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: bqSi294 II; bqSi1308 IV.
Notes: bqSi294 [hsp16.41p::FRT::mCherry::his-58::FRT::GFP::his-58 + unc-119(+)] II; bqSi1308 [hlh-12p::FLP::SL2::mTagBFP2 + unc-119(+)] IV. Heat shock induces nuclear GFP expression in the distal tip cells and nuclear mCherry expression elsewhere. Constitutive expression of diffusible mTagBFP2 in the distal tip cells. Might carry unc-119(ed3) or unc-119(ed9) III. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051596 Copy
http://www.wormbase.org/db/get?name=WBStrain00051636
Source Database: WormBase (WB)
Affected Genes: WBGene00006654(ttx-3)|WBGene00009100(rgef-1)
Genomic Alteration: WBGene00006654(ttx-3), WBGene00009100(rgef-1)
Availability: unknown
Source References: EMPTY
Synonyms: juEx4586 [rgef-1p::GFP1-10 + ttx-3p::RFP].
Notes: juEx4586 [rgef-1p::GFP1-10 + ttx-3p::RFP]. Pick RFP+ to maintain. RFP expression in AIY neuron. Weak light green signals were observed in the neurons using compound scope although this is only the former half of the split GFP. Reference: Noma K, et al. Elife. 2017 Aug 2;6:e26376. doi: 10.7554/eLife.26376.|"Made_by: Ken Noma"
Proper citation: RRID:WB-STRAIN:WBStrain00051636 Copy
http://www.wormbase.org/db/get?name=WBStrain00051635
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: rjSi1 II.
Notes: rjSi1 [cra-1p::cra-1::GFP::cra-1 3'UTR + Cbr-unc-119(+)] II. Single copy insertion. cra-1 promoter, cra-1::GFP and 3'UTR was cloned into pCFJ150 (ttTi5605) vector and inserted into ttTi5605 of EG4322 strain. Outcrossed three times to N2 Bristol; could still carry unc-119(ed9) in the background. Superficially wild-type. This CRA-1::GFP fusion construct has been shown to be functional and its localization reflects endogenous CRA-1 localization. rjSi1 transgene can rescue synapsis defects of cra-1 mutants and restore cross-over events (six bivalents instead of the 11 to 12 univalents characteristic of cra-1 mutants). Brood size and embryonic lethality were significantly, albeit not completely, restored in the rescued line suggesting that the GFP tag might affect other CRA-1 functions. Reference: Gao J, et al. PLOS Genetics 11(3): e1005029. https:
Proper citation: RRID:WB-STRAIN:WBStrain00051635 Copy
http://www.wormbase.org/db/get?name=WBStrain00051634
Source Database: WormBase (WB)
Affected Genes: WBGene00002957(let-858)|WBGene00003310(mir-82)
Genomic Alteration: WBGene00002957(let-858), WBGene00003310(mir-82)
Availability: unknown
Source References: EMPTY
Synonyms: mir-82(umn87[mir-82p+SL1::EGL13NLS::lox2272mScarlet-I::cMycNLS::let-858 3' UTR::lox2272]) X.
Notes: Made_by: Julie Knott and Marcus L. Vargas|"Nuclear mScarlet-I was inserted in place of the endogenous mir-82 pre-miRNA via CRISPR/CAS9. Left Flanking: TATCATTCTCTCTACTACTAGTGAACTCAT, Right Flanking: TTATCAAGAAAATTCAAGAAAATTCAAAAG. sgRNA: CTGTAGATCACAGAGAAAAC."
Proper citation: RRID:WB-STRAIN:WBStrain00051634 Copy
http://www.wormbase.org/db/get?name=WBStrain00051584
Source Database: WormBase (WB)
Affected Genes: WBGene00001569(meg-3)|WBGene00016485(meg-4)
Genomic Alteration: WBGene00001569(meg-3), WBGene00016485(meg-4)
Availability: unknown
Source References: EMPTY
Synonyms: bqSi577 IV; meg-3(tm4259) meg-4(ax2026) X.
Notes: bqSi577 [myo-2p::GFP + unc-119(+)] IV. Germ granule defective, ~30 sterility. Express GFP in pharyngeal muscles. Reference: Toker IA, et al. Dev Cell. 2022 Feb 7;57(3):298-309.e9. PMID: 35134343|"Made_by: Itai Toker"
Proper citation: RRID:WB-STRAIN:WBStrain00051584 Copy
http://www.wormbase.org/db/get?name=WBStrain00051621
Source Database: WormBase (WB)
Affected Genes: WBGene00003275(mir-47)|WBGene00003514(myo-2)|WBGene00005016(sqt-1)
Genomic Alteration: WBGene00003275(mir-47), WBGene00003514(myo-2), WBGene00005016(sqt-1)
Availability: unknown
Source References: EMPTY
Synonyms: mir-47(umn55[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272])I.
Notes: mir-47 pre-miRNA deletion allele in which mir-47 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]
Proper citation: RRID:WB-STRAIN:WBStrain00051621 Copy
http://www.wormbase.org/db/get?name=WBStrain00051587
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: bqSi294 II; bqSi852 IV.
Notes: bqSi294 [hsp16.41p::FRT::mCherry::his-58::FRT::GFP::his-58 + unc-119(+)] II. bqSi852 [ckb-3p::FLP::SL2::mNG + unc-119(+)] IV. Heat shock induces nuclear GFP expression in the somatic gonad and nuclear mCherry expression elsewhere. Constitutive expression of diffusible mNeonGreen in the somatic gonad can mask GFP::HIS-58 signal. Might carry unc-119(ed3) or unc-119(ed9) III. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051587 Copy
http://www.wormbase.org/db/get?name=WBStrain00051620
Source Database: WormBase (WB)
Affected Genes: WBGene00003514(myo-2)|WBGene00005016(sqt-1)|WBGene00077715(mir-1818)
Genomic Alteration: WBGene00003514(myo-2), WBGene00005016(sqt-1), WBGene00077715(mir-1818)
Availability: unknown
Source References: EMPTY
Synonyms: mir-1818(umn54[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272])I.
Notes: mir-1818 pre-miRNA deletion allele in which mir-1818 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]
Proper citation: RRID:WB-STRAIN:WBStrain00051620 Copy
http://www.wormbase.org/db/get?name=WBStrain00051586
Source Database: WormBase (WB)
Affected Genes: WBGene00003210(mel-28)
Genomic Alteration: WBGene00003210(mel-28)
Availability: unknown
Source References: EMPTY
Synonyms: bqSi189 II; mel-28(bq17 [g>f>p::mel-28]) III.
Notes: bqSi189 [lmn-1p::mCherry::his-58 + unc-119(+)] II. Cassette for GFP-labeling and FLP-mediated inactivation of endogenous mel-28 inserted by CRISPR/Cas9 after the mel-28 start codon. FRT sites in GFP introns 2 & 3 are indicated by > symbols in genotype. Ubiquitous expression of mCherry::HIS-58. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051586 Copy
http://www.wormbase.org/db/get?name=WBStrain00051625
Source Database: WormBase (WB)
Affected Genes: WBGene00002957(let-858)|WBGene00003039(mir-48)
Genomic Alteration: WBGene00002957(let-858), WBGene00003039(mir-48)
Availability: unknown
Source References: EMPTY
Synonyms: mir-48(umn59[mir-48p+SL1::EGL-13NLS::mScarlet-I::cMycNLS::Lox511I::let-858 3'UTR]) V.
Notes: Made_by: Julie Knott & Marcus Vargas|"Nuclear mScarlet-I was inserted in place of the endogenous mir-48 pre-miRNA via CRISPR/CAS9. Left Flanking: CACAGGTAAGTCAATTAACCAATTG, Right Flanking: TTATTATTATGTTTCATTCAATAAC. sgRNA: GGGAATGCGAGCTAGGCTGG."
Proper citation: RRID:WB-STRAIN:WBStrain00051625 Copy
http://www.wormbase.org/db/get?name=WBStrain00051589
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: bqSi294 II; bqSi1021 IV.
Notes: bqSi294 [hsp16.41p::FRT::mCherry::his-58::FRT::GFP::his-58 + unc-119(+)] II; bqSi1021 [lin-31p::FLP::SL2::mNG + unc-119(+)] IV. Heat shock induces nuclear GFP expression in P1.p-P11.p and nuclear mCherry expression elsewhere. Constitutive expression of diffusible mNeonGreen in P1.p-P11.p can mask GFP::HIS-58 signal. May carry unc-119(ed3) or unc-119(ed9) III. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051589 Copy
http://www.wormbase.org/db/get?name=WBStrain00051570
Source Database: WormBase (WB)
Affected Genes: WBGene00009073(delm-1)|WBGene00016063(delm-2)|WBGene00016064(acd-1)
Genomic Alteration: WBGene00009073(delm-1), WBGene00016063(delm-2), WBGene00016064(acd-1)
Availability: unknown
Source References: PMID:37118502
Synonyms: acd-1(sta6) delm-2(ok1822) I; delm-1(ok1266) IV.
Notes: acd-1 and delm-2 are tandem paralogs. This double mutant was created by CRISPR-engineered deletion of acd-1 in a delm-2(ok1822) background (parental strain RB1523). acd-1(sta6) is predicted to be a null allele (~200bp indel causing frameshift in exon 4). This triple mutant strain was made by crossing the acd-1(sta6) delm-2(ok1822) double mutant with delm-1(ok1226) parental strain RB1177.|"Made_by: Lauren Booth"
Proper citation: RRID:WB-STRAIN:WBStrain00051570 Copy
http://www.wormbase.org/db/get?name=WBStrain00051614
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
Source References: EMPTY
Synonyms: unc-119(ed3) III; kstSi37 IV; kstEx46.
Notes: kstSi37 [Cbr-unc-119(kst13)] IV. kstEx46 [hsp-16.41p::Cas9::gpd-2::TagRFP-T::smu-1 3'UTR + mlc-1p::mCherry + NeoR]. Pick mCherry+ to maintain. Unc. Cbr-unc-119(kst13) is a partial unc-119 used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051614 Copy
http://www.wormbase.org/db/get?name=WBStrain00051612
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
Source References: EMPTY
Synonyms: kstSi84 I; unc-119(ed3) III.
Notes: kstSi84 [LoxP + Cbr-unc-119(+) + LoxP + mlc-2p::GFP(kst32)] I. N2-like, no MLC-2::GFP fluorescence. mlc-2p::GFP(kst32) is a partial, non-functional GFP reporter used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Cbr-unc-119(+) is flanked by LoxP sites, facilitating removal by recombination. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051612 Copy
http://www.wormbase.org/db/get?name=WBStrain00051578
Source Database: WormBase (WB)
Affected Genes: WBGene00001569(meg-3)|WBGene00016485(meg-4)
Genomic Alteration: WBGene00001569(meg-3), WBGene00016485(meg-4)
Availability: unknown
Source References: EMPTY
Synonyms: mjIs134 II; meg-3(tm4259) meg-4(ax2026) X.
Notes: Made_by: Itai Toker|"mjIs134 [mex-5p::GFP::(Gly)5Ala::his-58::tbb-2 3'UTR + Cbr-unc-119(+)] II. Germ granule defective. ~30% sterility, maintain by picking gravid adults with visible embryos. Nuclear GFP expression in the germline. Reference: Lev I, et al. Curr Biol. 2019 Sep 9;29(17):2880-2891.e4. PMID: 31378614"
Proper citation: RRID:WB-STRAIN:WBStrain00051578 Copy
http://www.wormbase.org/db/get?name=WBStrain00051611
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
Source References: EMPTY
Synonyms: kstSi61 II; unc-119(ed3) III.
Notes: kstSi61 [LoxP + Cbr-unc-119(+) + LoxP + hygroR(kst31)] II. N2-like, no hygromycin resistance (HygroR). hygroR(kst31) is a partial, non-functional hygromycin-resistance construct used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Cbr-unc-119(+) is flanked by LoxP sites, facilitating removal by recombination. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051611 Copy
http://www.wormbase.org/db/get?name=WBStrain00051617
Source Database: WormBase (WB)
Affected Genes: WBGene00001182(egl-13)|WBGene00002957(let-858)|WBGene00003335(mir-241)
Genomic Alteration: WBGene00001182(egl-13), WBGene00002957(let-858), WBGene00003335(mir-241)
Availability: unknown
Source References: EMPTY
Synonyms: mir-241(umn47[mir-241p+SL1::egl-13-NLS::mScarlet-I::c-myc-NLS::linker::mODC(422-461)(E428A/E430A/E431A)::let-858 3' UTR]) V.
Notes: Made_by: Marcus Vargas & Julie Knott|"Nuclear mScarlet-I fused to a PEST was inserted in place of the endogenous mir-241 pre-miRNA via CRISPR/CAS9. Left Flanking: CTATTTTTTTCACTTGGATTAGGGG, Right Flanking: GGGATGCTCTTTTTGTACCAAACCG. sgRNA: CCTCAACTTTGACACCCCCG."
Proper citation: RRID:WB-STRAIN:WBStrain00051617 Copy
http://www.wormbase.org/db/get?name=WBStrain00051561
Source Database: WormBase (WB)
Affected Genes: WBGene00004143(pqn-59)
Genomic Alteration: WBGene00004143(pqn-59)
Availability: unknown
Source References: PMID:34661238
Synonyms: pqn-59::ollas::STOP(cz2)
Notes: Batch Strain object requested via get_NS_ids.pl
Proper citation: RRID:WB-STRAIN:WBStrain00051561 Copy
http://www.wormbase.org/db/get?name=WBStrain00051566
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: ldIs7[skn-1b/c::GFP; rol-6(su1006)]
Notes: [2022-05-02T21:36:56.545Z WBPerson712] New Strain: lsIs7[skn-1b/c::GFP + rol-6(su1006)]|"[2022-05-02T21:39:29.432Z WBPerson712] Kill Strain: typo in genotype"|"[2022-05-02T21:40:28.377Z WBPerson712] Ressurect Strain: yes, genotype should be ldIs7[skn-1b/c::GFP; rol-6(su1006)]"
Proper citation: RRID:WB-STRAIN:WBStrain00051566 Copy
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