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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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tts-1(ot1234[tts-1p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055041 | Caenorhabditis elegans | tts-1(ot1234[tts-1p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) X. | Made_by: Sandeep Wontakal|"The Null Transcriptional Reporter (NuTR) cassette was used to remove the tts-1 locus resulting in a null allele and transcriptional reporter driving expression of GFP. The cassette contains the dominant sqt-1(e1350) allele that results in roller animals. Expression of Cre (via crossing into a strain expressing a germline Cre or by injection of a Cre transgene) will result in removal of the selectable markers and result in non-roller animals. Pick Rollers to retain full transgene cassette. GFP expression is seen in several tissues including the pharynx but is significantly upregulated in a stress-dependent manner in a variety of tissues." | WBGene00005016(sqt-1)|WBGene00006537(tbb-2)|WBGene00006650(tts-1) | WBGene00005016(sqt-1), WBGene00006537(tbb-2), WBGene00006650(tts-1) | WB-STRAIN:WBStrain00055041 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:47 | 0 | ||||
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linc-41(ot1231[linc-41p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055040 | Caenorhabditis elegans | linc-41(ot1231[linc-41p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) IV. | Made_by: Sandeep Wontakal|"The Null Transcriptional Reporter (NuTR) cassette was used to remove the linc-41 locus resulting in a null allele and transcriptional reporter driving expression of GFP. The cassette contains the dominant sqt-1(e1350) allele that results in roller animals. Expression of Cre (via crossing into a strain expressing a germline Cre or by injection of a Cre transgene) will result in removal of the selectable markers and result in non-roller animals. Pick Rollers to retain full transgene cassette. GFP expression is seen in the male somatic gonad, spermatheca of hermaphrodites, as well as several other tissues in the head." | WBGene00005016(sqt-1)|WBGene00006537(tbb-2)|WBGene00219689(linc-41) | WBGene00005016(sqt-1), WBGene00006537(tbb-2), WBGene00219689(linc-41) | WB-STRAIN:WBStrain00055040 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 | ||||
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eat-4(syb4257[eat-4::T2A::GFP::H2B]) III. Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00055124 | Caenorhabditis elegans | eat-4(syb4257[eat-4::T2A::GFP::H2B]) III. | Endogenous eat-4 locus tagged with T2A::GFP::H2B. Healthy strain that has all glutamatergic neurons marked with GFP. Reference: Vidal B, et al. Elife. 2022 Mar 24;11:e76003. doi: 10.7554/eLife.76003. PMID: 35324425|"Made_by: Suny Biotech" | WBGene00001135(eat-4) | WBGene00001135(eat-4) | WB-STRAIN:WBStrain00055124 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:50 | 1 | ||||
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flp-20(syb4049[flp-20::SL2::GFP::H2B]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055123 | Caenorhabditis elegans | flp-20(syb4049[flp-20::SL2::GFP::H2B]) X. | GFP tag inserted at the C-terminus of the endogenous flp-20 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"GFP tag inserted at the C-terminus of the endogenous flp-20 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Ripoll-Sanchez L, et al. Neuron. 2023 Nov 15;111(22):3570-3589.e5. doi: 10.1016/j.neuron.2023.09.043. PMID: 37935195."|"Made_by: Suny Biotech"|"Supplementary_genotype flp-20(syb4049[flp-20::SL2::GFP::H2B]) X" | WBGene00001463(flp-20) | WBGene00001463(flp-20) | WB-STRAIN:WBStrain00055123 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-08-29 09:28:49 | 0 | |||
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flp-32(syb4374[flp-32::SL2::gfp::H2B])X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055125 | Caenorhabditis elegans | flp-32(syb4374[flp-32::SL2::gfp::H2B])X. | CRISPR/Cas9 engineered tagged endogenous locus. Reference: Cros C & Hobert O. Proc Natl Acad Sci USA. 2022 Sep 13;119(37):e2206817119. doi: 10.1073/pnas.2206817119. PMID: 36067313.|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:"|"Made_by: Suny Biotech"|"Supplementary_genotype flp-32(syb4374[flp-32::SL2::gfp::H2B]) X" | WBGene00010982(flp-32) | WBGene00010982(flp-32) | WB-STRAIN:WBStrain00055125 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-08-29 09:28:49 | 0 | |||
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pah-1(syb3634[GFP::H2B::T2A::pah-1]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055120 | Caenorhabditis elegans | pah-1(syb3634[GFP::H2B::T2A::pah-1]) II. | Made_by: Frank Schroeder via SUNY Biotech|"Superficially wild-type. GFP tag inserted into endogenous pah-1 locus by CRISPR/Cas9." | WBGene00000240(pah-1) | WBGene00000240(pah-1) | WB-STRAIN:WBStrain00055120 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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nlp-40(syb3208 [nlp-40::T2A::3XNLS::GFP]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055086 | Caenorhabditis elegans | nlp-40(syb3208 [nlp-40::T2A::3XNLS::GFP]) I. | GFP tag inserted at the C-terminus of the endogenous nlp-40 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00022276(nlp-40) | WBGene00022276(nlp-40) | WB-STRAIN:WBStrain00055086 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 | ||||
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flp-9(syb3229[flp-9::T2A::3xNLS::GFP]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055089 | Caenorhabditis elegans | flp-9(syb3229[flp-9::T2A::3xNLS::GFP]) IV. | CRISPR/Cas9 engineered tagged endogenous locus.|"CRISPR/Cas9 engineered tagged endogneous locus."|"Made_by: Suny Biotech" | WBGene00001452(flp-9) | WBGene00001452(flp-9) | WB-STRAIN:WBStrain00055089 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 | ||||
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nlp-51(syb3936[nlp-51::SL2::GFP::H2B]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055122 | Caenorhabditis elegans | nlp-51(syb3936[nlp-51::SL2::GFP::H2B]) II. | GFP tag inserted at the C-terminus of the endogenous nlp-51 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. bioRxiv 2022.04.29.490095; doi: https:|"GFP tag inserted at the C-terminus of the endogenous nlp-51 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. PLoS Genet. 2022 Sep 30;18(9):e1010372. doi: 10.1371/journal.pgen.1010372. PMID: 36178933."|"Made_by: Suny Biotech"|"Supplementary_genotype nlp-51(syb3936[nlp-51::SL2::GFP::H2B]) II" | WBGene00011997(nlp-51) | WBGene00011997(nlp-51) | WB-STRAIN:WBStrain00055122 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-08-29 09:28:49 | 0 | |||
|
nlp-17(syb3222[nlp-17::T2A::3NLS::GFP]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055088 | Caenorhabditis elegans | nlp-17(syb3222[nlp-17::T2A::3NLS::GFP]) IV. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00003755(nlp-17) | WBGene00003755(nlp-17) | WB-STRAIN:WBStrain00055088 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
|
trh-1(syb4421[trh-1::SL2::GFP::H2B]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055129 | Caenorhabditis elegans | trh-1(syb4421[trh-1::SL2::GFP::H2B]) IV. | CRISPR/Cas9-engineered reporter allele. Reference: The enteric nervous system of C. elegans is specified by the Sine Oculis-like homeobox gene ceh-34. Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:|"CRISPR/Cas9-engineered reporter allele. Reference: Vidal B, et al. Elife. 2022 Mar 24:11:e76003. doi: 10.7554/eLife.76003. PMID: 35324425."|"Made_by: Suny Biotech"|"Supplementary_genotype trh-1(syb4421[trh-1::SL2::GFP::H2B]) IV" | WBGene00007827(trh-1) | WBGene00007827(trh-1) | WB-STRAIN:WBStrain00055129 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-08-29 09:28:49 | 0 | |||
|
flp-23(syb3242[flp-23::T2A::3xNLS::GFP]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055094 | Caenorhabditis elegans | flp-23(syb3242[flp-23::T2A::3xNLS::GFP]) III. | CRISPR/Cas9 engineered tagged endogenous locus.|"CRISPR/Cas9 engineered tagged endogneous locus."|"Made_by: Suny Biotech" | WBGene00017693(flp-23) | WBGene00017693(flp-23) | WB-STRAIN:WBStrain00055094 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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capa-1(syb3250[capa-1::T2A::3xNLS::GFP]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055095 | Caenorhabditis elegans | capa-1(syb3250[capa-1::T2A::3xNLS::GFP]) X. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00021268(capa-1) | WBGene00021268(capa-1) | WB-STRAIN:WBStrain00055095 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 | ||||
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rgba-1(syb3372[rgba-1::T2A::3xNLS::GFP]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055112 | Caenorhabditis elegans | rgba-1(syb3372[rgba-1::T2A::3xNLS::GFP]) I. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00077766(rgba-1) | WBGene00077766(rgba-1) | WB-STRAIN:WBStrain00055112 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:50 | 0 | ||||
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nlp-64(syb3384[nlp-64::T2A::3xNLS::GFP]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055114 | Caenorhabditis elegans | nlp-64(syb3384[nlp-64::T2A::3xNLS::GFP]) X. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00019734(nlp-64) | WBGene00019734(nlp-64) | WB-STRAIN:WBStrain00055114 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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flp-25(syb3172[flp-25::T2A::3NLS::GFP]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055076 | Caenorhabditis elegans | flp-25(syb3172[flp-25::T2A::3NLS::GFP]) III. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00010575(flp-25) | WBGene00010575(flp-25) | WB-STRAIN:WBStrain00055076 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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flp-24(syb3334[flp-24::T2A::3NLS::GFP]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055111 | Caenorhabditis elegans | flp-24(syb3334[flp-24::T2A::3NLS::GFP]) III. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00016028(flp-24) | WBGene00016028(flp-24) | WB-STRAIN:WBStrain00055111 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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nlp-10(syb3179[nlp-10::T2A::3NLS::GFP]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055077 | Caenorhabditis elegans | nlp-10(syb3179[nlp-10::T2A::3NLS::GFP]) III. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00003748(nlp-10) | WBGene00003748(nlp-10) | WB-STRAIN:WBStrain00055077 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 | ||||
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ceh-27(syb2714[loxP] syb3286[loxP] syb3426[ceh27::GFP]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055116 | Caenorhabditis elegans | ceh-27(syb2714[loxP] syb3286[loxP] syb3426[ceh27::GFP]) V. | CRISPR/Cas9 engineered tagged endogenous locus. Reference: Reilly MB, et al. Widespread employment of conserved C. elegans homeobox genes in neuronal identity specification. bioRxiv 2022.04.29.490095; doi: https:|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Reilly MB, et al. Widespread employment of conserved C. elegans homeobox genes in neuronal identity specification. bioRxiv 2022.04.29.490095; doi: https:"|"Made_by: Suny Biotech" | WBGene00000449(ceh-27) | WBGene00000449(ceh-27) | WB-STRAIN:WBStrain00055116 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:49 | 0 | ||||
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flp-18(syb3193[flp-18::T2A::3NLS::GFP]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00055083 | Caenorhabditis elegans | flp-18(syb3193[flp-18::T2A::3NLS::GFP]) X. | Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech" | WBGene00001461(flp-18) | WBGene00001461(flp-18) | WB-STRAIN:WBStrain00055083 | WormBase (WB) | WB | unknown | 2026-08-29 09:28:48 | 0 |
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