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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00055041
Source Database: WormBase (WB)
Affected Genes: WBGene00005016(sqt-1)|WBGene00006537(tbb-2)|WBGene00006650(tts-1)
Genomic Alteration: WBGene00005016(sqt-1), WBGene00006537(tbb-2), WBGene00006650(tts-1)
Availability: unknown
Source References: EMPTY
Synonyms: tts-1(ot1234[tts-1p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) X.
Notes: Made_by: Sandeep Wontakal|"The Null Transcriptional Reporter (NuTR) cassette was used to remove the tts-1 locus resulting in a null allele and transcriptional reporter driving expression of GFP. The cassette contains the dominant sqt-1(e1350) allele that results in roller animals. Expression of Cre (via crossing into a strain expressing a germline Cre or by injection of a Cre transgene) will result in removal of the selectable markers and result in non-roller animals. Pick Rollers to retain full transgene cassette. GFP expression is seen in several tissues including the pharynx but is significantly upregulated in a stress-dependent manner in a variety of tissues."
Proper citation: RRID:WB-STRAIN:WBStrain00055041 Copy
http://www.wormbase.org/db/get?name=WBStrain00055040
Source Database: WormBase (WB)
Affected Genes: WBGene00005016(sqt-1)|WBGene00006537(tbb-2)|WBGene00219689(linc-41)
Genomic Alteration: WBGene00005016(sqt-1), WBGene00006537(tbb-2), WBGene00219689(linc-41)
Availability: unknown
Source References: EMPTY
Synonyms: linc-41(ot1231[linc-41p::SL1::tbb-2 5'UTR::GFP::H2B::loxP::sqt-1(d)::hygR::loxP::3xFLAG::tbb-2 3'UTR]) IV.
Notes: Made_by: Sandeep Wontakal|"The Null Transcriptional Reporter (NuTR) cassette was used to remove the linc-41 locus resulting in a null allele and transcriptional reporter driving expression of GFP. The cassette contains the dominant sqt-1(e1350) allele that results in roller animals. Expression of Cre (via crossing into a strain expressing a germline Cre or by injection of a Cre transgene) will result in removal of the selectable markers and result in non-roller animals. Pick Rollers to retain full transgene cassette. GFP expression is seen in the male somatic gonad, spermatheca of hermaphrodites, as well as several other tissues in the head."
Proper citation: RRID:WB-STRAIN:WBStrain00055040 Copy
http://www.wormbase.org/db/get?name=WBStrain00055124
Source Database: WormBase (WB)
Affected Genes: WBGene00001135(eat-4)
Genomic Alteration: WBGene00001135(eat-4)
Availability: unknown
Source References: EMPTY
Synonyms: eat-4(syb4257[eat-4::T2A::GFP::H2B]) III.
Notes: Endogenous eat-4 locus tagged with T2A::GFP::H2B. Healthy strain that has all glutamatergic neurons marked with GFP. Reference: Vidal B, et al. Elife. 2022 Mar 24;11:e76003. doi: 10.7554/eLife.76003. PMID: 35324425|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055124 Copy
http://www.wormbase.org/db/get?name=WBStrain00055123
Source Database: WormBase (WB)
Affected Genes: WBGene00001463(flp-20)
Genomic Alteration: WBGene00001463(flp-20)
Availability: unknown
Source References: PMID:37935195
Synonyms: flp-20(syb4049[flp-20::SL2::GFP::H2B]) X.
Notes: GFP tag inserted at the C-terminus of the endogenous flp-20 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"GFP tag inserted at the C-terminus of the endogenous flp-20 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Ripoll-Sanchez L, et al. Neuron. 2023 Nov 15;111(22):3570-3589.e5. doi: 10.1016/j.neuron.2023.09.043. PMID: 37935195."|"Made_by: Suny Biotech"|"Supplementary_genotype flp-20(syb4049[flp-20::SL2::GFP::H2B]) X"
Proper citation: RRID:WB-STRAIN:WBStrain00055123 Copy
http://www.wormbase.org/db/get?name=WBStrain00055125
Source Database: WormBase (WB)
Affected Genes: WBGene00010982(flp-32)
Genomic Alteration: WBGene00010982(flp-32)
Availability: unknown
Source References: PMID:37935195
Synonyms: flp-32(syb4374[flp-32::SL2::gfp::H2B])X.
Notes: CRISPR/Cas9 engineered tagged endogenous locus. Reference: Cros C & Hobert O. Proc Natl Acad Sci USA. 2022 Sep 13;119(37):e2206817119. doi: 10.1073/pnas.2206817119. PMID: 36067313.|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:"|"Made_by: Suny Biotech"|"Supplementary_genotype flp-32(syb4374[flp-32::SL2::gfp::H2B]) X"
Proper citation: RRID:WB-STRAIN:WBStrain00055125 Copy
http://www.wormbase.org/db/get?name=WBStrain00055120
Source Database: WormBase (WB)
Affected Genes: WBGene00000240(pah-1)
Genomic Alteration: WBGene00000240(pah-1)
Availability: unknown
Source References: EMPTY
Synonyms: pah-1(syb3634[GFP::H2B::T2A::pah-1]) II.
Notes: Made_by: Frank Schroeder via SUNY Biotech|"Superficially wild-type. GFP tag inserted into endogenous pah-1 locus by CRISPR/Cas9."
Proper citation: RRID:WB-STRAIN:WBStrain00055120 Copy
http://www.wormbase.org/db/get?name=WBStrain00055086
Source Database: WormBase (WB)
Affected Genes: WBGene00022276(nlp-40)
Genomic Alteration: WBGene00022276(nlp-40)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-40(syb3208 [nlp-40::T2A::3XNLS::GFP]) I.
Notes: GFP tag inserted at the C-terminus of the endogenous nlp-40 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055086 Copy
http://www.wormbase.org/db/get?name=WBStrain00055089
Source Database: WormBase (WB)
Affected Genes: WBGene00001452(flp-9)
Genomic Alteration: WBGene00001452(flp-9)
Availability: unknown
Source References: EMPTY
Synonyms: flp-9(syb3229[flp-9::T2A::3xNLS::GFP]) IV.
Notes: CRISPR/Cas9 engineered tagged endogenous locus.|"CRISPR/Cas9 engineered tagged endogneous locus."|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055089 Copy
http://www.wormbase.org/db/get?name=WBStrain00055122
Source Database: WormBase (WB)
Affected Genes: WBGene00011997(nlp-51)
Genomic Alteration: WBGene00011997(nlp-51)
Availability: unknown
Source References: PMID:37935195
Synonyms: nlp-51(syb3936[nlp-51::SL2::GFP::H2B]) II.
Notes: GFP tag inserted at the C-terminus of the endogenous nlp-51 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. bioRxiv 2022.04.29.490095; doi: https:|"GFP tag inserted at the C-terminus of the endogenous nlp-51 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. PLoS Genet. 2022 Sep 30;18(9):e1010372. doi: 10.1371/journal.pgen.1010372. PMID: 36178933."|"Made_by: Suny Biotech"|"Supplementary_genotype nlp-51(syb3936[nlp-51::SL2::GFP::H2B]) II"
Proper citation: RRID:WB-STRAIN:WBStrain00055122 Copy
http://www.wormbase.org/db/get?name=WBStrain00055088
Source Database: WormBase (WB)
Affected Genes: WBGene00003755(nlp-17)
Genomic Alteration: WBGene00003755(nlp-17)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-17(syb3222[nlp-17::T2A::3NLS::GFP]) IV.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055088 Copy
http://www.wormbase.org/db/get?name=WBStrain00055129
Source Database: WormBase (WB)
Affected Genes: WBGene00007827(trh-1)
Genomic Alteration: WBGene00007827(trh-1)
Availability: unknown
Source References: PMID:37935195
Synonyms: trh-1(syb4421[trh-1::SL2::GFP::H2B]) IV.
Notes: CRISPR/Cas9-engineered reporter allele. Reference: The enteric nervous system of C. elegans is specified by the Sine Oculis-like homeobox gene ceh-34. Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:|"CRISPR/Cas9-engineered reporter allele. Reference: Vidal B, et al. Elife. 2022 Mar 24:11:e76003. doi: 10.7554/eLife.76003. PMID: 35324425."|"Made_by: Suny Biotech"|"Supplementary_genotype trh-1(syb4421[trh-1::SL2::GFP::H2B]) IV"
Proper citation: RRID:WB-STRAIN:WBStrain00055129 Copy
http://www.wormbase.org/db/get?name=WBStrain00055094
Source Database: WormBase (WB)
Affected Genes: WBGene00017693(flp-23)
Genomic Alteration: WBGene00017693(flp-23)
Availability: unknown
Source References: EMPTY
Synonyms: flp-23(syb3242[flp-23::T2A::3xNLS::GFP]) III.
Notes: CRISPR/Cas9 engineered tagged endogenous locus.|"CRISPR/Cas9 engineered tagged endogneous locus."|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055094 Copy
http://www.wormbase.org/db/get?name=WBStrain00055095
Source Database: WormBase (WB)
Affected Genes: WBGene00021268(capa-1)
Genomic Alteration: WBGene00021268(capa-1)
Availability: unknown
Source References: EMPTY
Synonyms: capa-1(syb3250[capa-1::T2A::3xNLS::GFP]) X.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055095 Copy
http://www.wormbase.org/db/get?name=WBStrain00055112
Source Database: WormBase (WB)
Affected Genes: WBGene00077766(rgba-1)
Genomic Alteration: WBGene00077766(rgba-1)
Availability: unknown
Source References: EMPTY
Synonyms: rgba-1(syb3372[rgba-1::T2A::3xNLS::GFP]) I.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055112 Copy
http://www.wormbase.org/db/get?name=WBStrain00055114
Source Database: WormBase (WB)
Affected Genes: WBGene00019734(nlp-64)
Genomic Alteration: WBGene00019734(nlp-64)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-64(syb3384[nlp-64::T2A::3xNLS::GFP]) X.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055114 Copy
http://www.wormbase.org/db/get?name=WBStrain00055076
Source Database: WormBase (WB)
Affected Genes: WBGene00010575(flp-25)
Genomic Alteration: WBGene00010575(flp-25)
Availability: unknown
Source References: EMPTY
Synonyms: flp-25(syb3172[flp-25::T2A::3NLS::GFP]) III.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055076 Copy
http://www.wormbase.org/db/get?name=WBStrain00055111
Source Database: WormBase (WB)
Affected Genes: WBGene00016028(flp-24)
Genomic Alteration: WBGene00016028(flp-24)
Availability: unknown
Source References: EMPTY
Synonyms: flp-24(syb3334[flp-24::T2A::3NLS::GFP]) III.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055111 Copy
http://www.wormbase.org/db/get?name=WBStrain00055077
Source Database: WormBase (WB)
Affected Genes: WBGene00003748(nlp-10)
Genomic Alteration: WBGene00003748(nlp-10)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-10(syb3179[nlp-10::T2A::3NLS::GFP]) III.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055077 Copy
http://www.wormbase.org/db/get?name=WBStrain00055116
Source Database: WormBase (WB)
Affected Genes: WBGene00000449(ceh-27)
Genomic Alteration: WBGene00000449(ceh-27)
Availability: unknown
Source References: EMPTY
Synonyms: ceh-27(syb2714[loxP] syb3286[loxP] syb3426[ceh27::GFP]) V.
Notes: CRISPR/Cas9 engineered tagged endogenous locus. Reference: Reilly MB, et al. Widespread employment of conserved C. elegans homeobox genes in neuronal identity specification. bioRxiv 2022.04.29.490095; doi: https:|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Reilly MB, et al. Widespread employment of conserved C. elegans homeobox genes in neuronal identity specification. bioRxiv 2022.04.29.490095; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055116 Copy
http://www.wormbase.org/db/get?name=WBStrain00055083
Source Database: WormBase (WB)
Affected Genes: WBGene00001461(flp-18)
Genomic Alteration: WBGene00001461(flp-18)
Availability: unknown
Source References: EMPTY
Synonyms: flp-18(syb3193[flp-18::T2A::3NLS::GFP]) X.
Notes: Endogenous locus tagged with T2A::3xNLS::GFP using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055083 Copy
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