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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Mayo Alzheimer's Disease Research Center Resource Report Resource Website |
Mayo Alzheimer's Disease Research Center (RRID:SCR_008727) | Mayo ADRC | data or information resource, organization portal, portal | A clinical research department that specializes in the study of Alzheimer's disease. The Mayo Clinic Alzheimer's Disease Research Center conducts many types of research studies related to dementia, as well as normal or successful aging. The purpose of the center is to provide care for dementia patients and promote research and education on Alzheimer's Disease and related dementias. | alzheimer's disease, mild cognitive impairment, early dementia, lewy body dementia, dementia, normal control, late adult human, healthy, memory, neuroimaging, department portal |
has parent organization: Mayo Clinic Florida; Florida; USA has parent organization: Mayo Clinic Minnesota; Minnesota; USA is parent organization of: Mayo Clinic Jacksonville: Neuropathology and Microscopy |
Aging | NIA | Public, Available to the research community | nlx_144139 | http://mayoresearch.mayo.edu/mayo/research/alzheimers_center/index.cfm | SCR_008727 | Mayo Clinic Alzheimer's Disease Research Center, Mayo Alzheimer's Disease Research Center | 2026-09-12 01:00:58 | 0 | ||||
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UNC/Utah NAMIC DTI Fiber Analysis Framework Resource Report Resource Website 1+ mentions |
UNC/Utah NAMIC DTI Fiber Analysis Framework (RRID:SCR_009615) | UNC/Utah NAMIC DTI Fiber Analysis Framework | data or information resource, data set, software resource | Project hosting binary packaged distributions, scripts, example datasets, and corresponding results of analysis using their UNC/Utah NAMIC DTI Fiber Analysis Framework. This project can be seens as a master project encompassing several current NITRC projects into a coherent set. Their workflow utilizes tools already available on NITRC including: * DTIPrep * DTIAtlasBuilder * FiberViewerLight * DTIAtlasFiberAnalyzer * FADTTS | magnetic resonance, pediatric | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | BSD License | nlx_155837 | SCR_009615 | 2026-09-12 01:01:00 | 1 | ||||||||
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Nonhuman Primate Reagent Resource Resource Report Resource Website 100+ mentions |
Nonhuman Primate Reagent Resource (RRID:SCR_012986) | NHPRR | antibody supplier, material resource, reagent supplier | Center that facilitates the optimal use of nonhuman primate models in biomedical research by identifying, developing, characterizing and producing reagents for monitoring or modulating immune responses. They distribute non-human primate-specific antibodies for in vitro diagnostics, as well as develop and produce primate recombinant antibodies for in vivo cell depletion or modulating immune responses. | anti-ig, antibody, biomedical, cell, depletion, diagnostic, immune, immunoglobulin, in vitro, in vivo, macaque, monkey, nonhuman, primate, reagent, recombinant, research, response, specie | NCRR RR016001; NIAID AI040101; NIAID AI126683; NIH Office of the Director R24 OD010976; NIH 2722001300031C; NIH 272200900037C; NIH 272201300031C; NIH 286200400101C; NIH AI-040101; NIH AI-126683; NIH HHSN2722001300031C; NIH HHSN272200900037C; NIH HHSN286200400101C; NIH NHPRR; NIH OD-010976; NIH RR-016001 |
nif-0000-24368 | https://orip.nih.gov/comparative-medicine/programs/vertebrate-models, http://www.nhpreagents.org/NHP/contact.aspx | http://nhpreagents.bidmc.harvard.edu/NHP/default.aspx | SCR_012986 | nhp reagents, Nonhuman Primate Reagent Resources, Non-human primate repository, Non human Primate Reagent Resources, NHP Reagent Resource, nhpreagents, NIH Nonhuman Primate Reagent Resource, NHP Reagent, nhpreagent, Non-human Primate Reagent Resources | 2026-09-12 01:01:01 | 230 | ||||||
|
ArtforScience Resource Report Resource Website |
ArtforScience (RRID:SCR_012506) | commercial organization, production service resource, service resource | ArtforScience helps faculty and scientists communicate their research data for grants, talks, publications, posters, or websites. The illustrations and schematics of biological data have appeared in many of the widely-used textbooks and scientific journals. Our work has been featured on the covers of Cell, Science, and Nature, among others. | art, illustration, communication | is listed by: ScienceExchange | Available to the research community | SciEx_321 | SCR_012506 | Art for Science | 2026-09-12 01:01:01 | 0 | ||||||||
|
MITRE Resource Report Resource Website 10+ mentions |
MITRE (RRID:SCR_010690) | MITRE | data or information resource, organization portal, portal | The MITRE Corporation is a not-for-profit organization chartered to work in the public interest. As a national resource, we apply our expertise in systems engineering, information technology, operational concepts, and enterprise modernization to address our sponsors'' critical needs. MITRE manages Federally Funded Research and Development Centers (FFRDCs): one for the Department of Defense (known as the DoD Command, Control, Communications and Intelligence FFRDC), one for the Federal Aviation Administration (the Center for Advanced Aviation System Development), one for the Internal Revenue Service and U.S. Department of Veterans Affairs (the Center for Enterprise Modernization), and one for the Department of Homeland Security (the Homeland Security Systems Engineering and Development Institute). We believe that each FFRDC benefits from being part of an independent, not-for-profit company managing multiple FFRDCs. MITRE also has its own independent research and development program that explores new technologies and new uses of technologies to solve our sponsors'' problems in the near-term and in the future. MITRE has 7,000 scientists, engineers and support specialists65 percent of whom have Masters or Ph.D. degrees. Staff members work on hundreds of different projects across the company, demanding a high level of technical, operational, and domain knowledge. The MITRE Corporation has two principal locations: Bedford, Massachusetts, and McLean, Virginia. MITRE also has additional sites across the country and around the world. | Department of Defense ; Federal Aviation Administration ; Internal Revenue Service ; U.S. Department of Veterans Affairs ; Department of Homeland Security |
nlx_80219 | SCR_010690 | MITRE Corporation | 2026-09-12 01:01:00 | 18 | |||||||||
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TCG Life Sciences Resource Report Resource Website 1+ mentions |
TCG Life Sciences (RRID:SCR_010571) | data or information resource, organization portal, portal | Leading contract research and manufacturing services company in the area of drug discovery and development. | commercial organization | grid.465113.4, nlx_41588, ISNI: 0000 0004 1768 2407 | https://ror.org/030rrcn92 | SCR_010571 | TCG Life Sciences Biobank | 2026-09-12 01:01:00 | 1 | |||||||||
|
Medscape App for iPhone and iPod touch Resource Report Resource Website |
Medscape App for iPhone and iPod touch (RRID:SCR_010610) | mobile app, software application, software resource | Free medical app for comprising a drug reference, drug interaction checker, disease and condition reference, procedures and protocols and specialty-focused Medical News * Drug Reference: Search prescribing and safety information for over 8,000 brand, generic and OTC drugs, herbals and supplements * Drug Interaction Checker: Check mild interactions to serious contraindications for any combination of drugs, herbals and supplements * Disease & Condition Reference: Review the latest in-depth clinical information for 4,000+ diseases and conditions (enhanced with images and videos) *Procedures & Protocols: Follow detailed stepbystep instructions for 600+ clinical procedures, including 80+ widely used Tables & Protocols * Specialty-focused Medical News: Read in-depth medical news articles daily in 30 specialty areas | iphone | Free | nlx_55618 | SCR_010610 | Medscape App | 2026-09-12 01:01:00 | 0 | |||||||||
|
University of Georgia Labs and Facilities Resource Report Resource Website 1+ mentions |
University of Georgia Labs and Facilities (RRID:SCR_011033) | UGA Labs and Facilities, UGA Labs & Facilities | data or information resource, organization portal, portal | University of Georgia Core Facilities provide equipment and services to researchers at UGA, other universities, government agencies, nonprofit organizations and industry. These facilities make use of highly specialized scientific equipment, diagnostic tools, adaptable prototyping processes and mechanical production shops. |
is listed by: ScienceExchange is related to: Georgia Genomics and Bioinformatics Core at the University of Georgia is related to: UGA Comparative Pathology Laboratory is related to: University of Georgia Bioexpression and Fermentation Core Facility has parent organization: University of Georgia; Georgia; USA |
SciEx_963 | http://www.scienceexchange.com/facilities/university-of-georgia | SCR_011033 | University of Georgia Labs & Facilities | 2026-09-12 01:01:00 | 1 | ||||||||
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BrainVoyager Resource Report Resource Website 100+ mentions |
BrainVoyager (RRID:SCR_013057) | data processing software, image analysis software, software application, software resource | Commercial neuroimaging software package for multi-modal data analysis and management. It has been programmed in C++ with efficient statistical, numerical, and image processing routines. It supports parallelized basic math routines on all platforms and uses modern multi-core, multi-processor hardware for demanding computational routines. | image analysis, neuroimaging, software, multi modal data, data analysis, data management, fmri, eeg, dti, meg |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps is affiliated with: Turbo-BrainVoyager is related to: BrainVoyager Brain Tutor is related to: BVQXtools is related to: NeuroElf has parent organization: Brain Innovation: Home of the BrainVoyager Product Family is parent organization of: BrainVoyager: Talairach Brain Atlas |
Commercial, License varies by geographic region | SCR_014267, nif-0000-00274 | SCR_013057 | BrainVoyager QX, Brain Voyager | 2026-09-12 01:01:01 | 186 | ||||||||
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Royal Botanic Gardens Kew Resource Report Resource Website |
Royal Botanic Gardens Kew (RRID:SCR_010543) | data or information resource, organization portal, portal | Throughout its history, the Royal Botanic Gardens, Kew has made important contributions to increasing the understanding of the plant kingdom with many benefits for mankind. Today it is still first and foremost a scientific institution. With its collections of living and preserved plants, of plant products and botanical information, it forms an encyclopaedia of knowledge about the plant kingdom. | is parent organization of: Plant DNA C-values Database | nlx_28094 | SCR_010543 | Kew | 2026-09-12 01:01:00 | 0 | ||||||||||
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Fiber Tracking Tool Resource Report Resource Website |
Fiber Tracking Tool (RRID:SCR_009474) | Fiber Tracking Tool | data processing software, image analysis software, software application, software resource | Used to analyze the fibers produced by ukf tractography | magnetic resonance | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | BSD License | nlx_155621 | SCR_009474 | 2026-09-12 01:00:59 | 0 | ||||||||
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CDC DHDSP Resource Report Resource Website 1+ mentions |
CDC DHDSP (RRID:SCR_012843) | DHDSP, CDC | data or information resource, organization portal, portal | It funded programs in 32 states and the District of Columbia in 2006 to promote cardiovascular health and to prevent morbidity and mortality due to heart disease and stroke. The Heart Disease and Stroke Prevention (HDSP) Policy Project was conducted to support the states in policy development and implementation. Through a contract with Mathematica Policy Research, Inc. (MPR), the following resources were developed: An annotated bibliography of state HDSP policy and activity sources A centralized database for state HDSP policies A guide to the fundamentals of HDSP policymaking A handbook for evaluating HDSP policies using an adaptation of the RE-AIM framework Sponsor. The HDSP Policy Project was supported by the Division for Heart Disease and Stroke Prevention, National Center for Chronic Disease Prevention and Health Promotion, Coordinating Center for Health Promotion, Centers for Disease Control and Prevention. | has parent organization: Centers for Disease Control and Prevention | nif-0000-30457 | http://www.cdc.gov/DHDSP/DHDSPLeg/ | SCR_012843 | Division for Heart Disease and Stroke Prevention, Centers of Disease Control and Prevention | 2026-09-12 01:01:01 | 3 | ||||||||
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Queensland DERM Resource Report Resource Website 1+ mentions |
Queensland DERM (RRID:SCR_012329) | DERM | data or information resource, organization portal, portal | The department handles some of the most complex issues facing Queensland, including securing water for the future, managing land use, meeting the challenges of climate change, and conserving the states natural and cultural heritage. We promote sustainable living and resource use, and employ the latest science to underpin decision making. We are responsible for developing initiatives which ensure Queensland reduces its carbon footprint while also making sure the State is well-placed to meet the impacts of climate change. The Queensland Centre for Climate Change Excellence (QCCCE) provides specific climate science and research on climate change impacts and addresses issues that are specifically relevant to Queensland. A suite of ClimateSmart programs encourages householders and business to contribute to minimising the impacts of climate change by reducing their carbon emissions. This will help achieve the Queensland Governments Toward Q2 Green target: cut by one-third Queenslanders carbon footprint with reduced car and electricity use while also conserving water at home, work and in their communities. grants/funding Natural Resources Awareness Grants 2010 recipients announced The successful applicants for the Natural Resources Awareness Grants for 2010 have been announced. More than 100 000 has been allocated to 17 community projects to help promote the importance of natural resource management and reduce our carbon footprint. Koala disease research fund The Koala Disease Research Fund is offering grants to support high quality research that will guide DERM management actions to mitigate the effects of disease on wild populations of koalas. Indigenous cultural heritage grants Two cultural heritage grant programs administered by DERM offer funding formanaging and protecting Indigenous cultural heritage sites and helping registered Indigenous cultural heritage bodies fulfil their legislative role. Incentives for natural resource management Visit the Natural Resource Management Incentives database for information on grants offered by industry and federal, state, and local governments for natural resource management activities. Queensland Sustainable Energy Innovation Fund The Queensland Sustainable Energy Innovation Fund helps Queensland-based organisations to develop innovative technologies for reducing consumption of fossil fuels, water or greenhouse gas emissions. Great Artesian Basin Sustainability Initiative The Great Artesian Basin Sustainability Initiative provides financial assistance to landholders to rehabilitate bores and replace bore drains with piped systems, which help preserve water and restore artesian pressure. Other grants Visit Queensland GovernmentGrants, or call Smart Service Queensland on 13 13 04* for information on current funding and grants for all Queensland Government departments. * Local call costs apply Closed Low Carbon Diet Community Funding Program The Low Carbon Diet Community Funding Program assists with administration and delivery costs to help Queensland groups and organisations implement the diet. Applications for Round 4 close 7 December 2009. Lifestyle Waterwise Grants program The 10 million Lifestyle Waterwise Grants program was launched in December 2006 to encourage community-based not-for-profit organisations to reduce their water consumption. | nif-0000-30442 | SCR_012329 | Department of Environment and Resource Management, Queensland Government Department of Environment and Resource Management | 2026-09-12 01:01:01 | 1 | ||||||||||
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Agency for Science Technology and Research Resource Report Resource Website 1+ mentions |
Agency for Science Technology and Research (RRID:SCR_011085) | funding resource, institution | Agency drives mission oriented research that advances scientific discovery and technological innovation. We play a key role in nurturing and developing talent and leaders for our Research Institutes, the wider research community, and industry.Our research creates economic growth and jobs for Singapore. As Science and Technology Organisation, we bridge gap between academia and industry in terms of research and development. |
is parent organization of: Genome Institute of Singapore; Singapore; Singapore is parent organization of: Defensins Knowledgebase is parent organization of: Bioinformatics Institute; Singapore; Singapore is parent organization of: Institute of Molecular and Cell Biology; Singapore; Singapore |
nlx_27227 | http://www.a-star.edu.sg/AgencyforScienceTechnologyandResearch/tabid/36/Default.aspx | SCR_011085 | A*STAR, A*STAR Singapore | 2026-09-12 01:01:00 | 6 | |||||||||
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Disease State Prediction Resource Report Resource Website |
Disease State Prediction (RRID:SCR_009467) | Disease State Prediction | data processing software, image analysis software, software application, software resource | These are the scripts used for the analyses reported in: Craddock RC, Holtzheimer PE, 3rd, Hu XP, Mayberg HS. (2009): Disease state prediction from resting state functional connectivity. Magn Reson Med 62(6):1619-28. Specifically included are scripts for performing t-test filter, reliability filter, recursive feature elimination, and reliability recursive feature elimination feature selection methods. These make use of wrappers that perform .632 bootstrap and k-fold cross validation strategies. The scripts are written in matlab and require the Bioinformatics toolbox. If you do not have the bioinformatics toolbox, the scripts can be easily modified to run with other matlab SVM toolboxes (i.e., libsvm, svmlight, shogun, etc.). | magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Georgia Institute of Technology; Georgia; USA |
PMID:19859933 | Creative Commons Attribution-NonCommercial License | nlx_155614 | SCR_009467 | 2026-09-12 01:00:59 | 0 | |||||||
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Homer2 Resource Report Resource Website 100+ mentions |
Homer2 (RRID:SCR_009586) | data processing software, image analysis software, software application, software resource | Software matlab scripts used for analyzing fNIRS data to obtain estimates and maps of brain activation. Graphical user interface (GUI) for visualization and analysis of functional near-infrared spectroscopy (fNIRS) data. | Analysis, optical, imaging, fnirs, map, brain, activation, BRAIN Initiative |
is recommended by: BRAIN Initiative is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: NIRx2nirs: A NIRx to .nirs data converter |
NCRR P41 RR14075; NIBIB EB025145; NIBIB R01 EB006385 |
Free, Available for download, Freely available | nlx_155773 | http://www.nitrc.org/projects/homer2, https://homer-fnirs.org/ | SCR_009586 | HOMER1, Photon Migration Imaging toolbox | 2026-09-12 01:00:59 | 250 | ||||||
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IIT Human Brain Atlas Resource Report Resource Website 1+ mentions |
IIT Human Brain Atlas (RRID:SCR_009587) | IIT Human Brain Atlas | atlas, data or information resource, reference atlas | Atlas that contains new anatomical, DTI, HARDI templates and probabilistic gray matter labels of the adult human brain in ICBM-152 space. Artifact-free MRI data from 72 human subjects was used in the development of the atlas. All diffusion MRI data collection was conducted using Turboprop, and spatial normalization was accomplished in a population-based fashion. A description of the contents of the atlas can be found in the Downloads link. NOTE: The files of the older IIT2 DTI Brain Template are still available. However, the new DTI template of the IIT Human Brain Atlas (v.3) is of superior quality and allows more accurate registration across subjects. | atlas data, magnetic resonance, adult human, dti |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Illinois Institute of Technology; Illinois; USA |
PMID:21218175 | Other/Commercial license License, Http://www.iit.edu/~mri/Downloads.html | nlx_155774 | http://www.nitrc.org/projects/iit | SCR_009587 | Illinois Institute of Technology Human Brain Atlas, The IIT Human Brain Atlas (v.3), IIT Human Brain Atlas (v.3) | 2026-09-12 01:00:59 | 9 | |||||
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HERMES Resource Report Resource Website 100+ mentions |
HERMES (RRID:SCR_009584) | HERMES | data processing software, software application, software resource, software toolkit | A toolbox for the Matlab environment designed to study functional and effective brain connectivity from neurophysiological data such as multivariate EEG and/or MEG records. It includes also visualization tools and statistical methods to address the problem of multiple comparisons. This toolbox may be very helpful to all the researchers working in the emerging field of brain connectivity analysis. | clinical neuroinformatics, computational neuroscience, connectivity analysis, directed transfer analysis, eeg, meg, electrocorticography, granger causality, information theory, matlab, partial directed coherence, transfer entropy analysis, connectivity, brain |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Polytechnic University of Madrid; Madrid; Spain |
Ministry of Education of the Community of Madrid NEUROTEU-CM program S2010/BMD-2460; Spanish Ministry of Economy and Competitiveness TEC2012-38453-CO4-01; Spanish Ministry of Economy and Competitiveness TEC2012-38453-CO4-03 |
GNU General Public License | nlx_155770 | http://www.nitrc.org/projects/hermes | SCR_009584 | HERramientas de MEdida de la Sincronizacion | 2026-09-12 01:00:59 | 138 | |||||
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University of Nevada Reno Labs and Facilities Resource Report Resource Website |
University of Nevada Reno Labs and Facilities (RRID:SCR_011008) | University of Nevada Reno Labs & Facilities | data or information resource, organization portal, portal | Nevada Center for Applied Research coordinates access to Shared Research Facilities extensive resource of labs with cutting edge research and development equipment available to internal University community and external clients from industry, government, research organizations and other institutions.In addition to services and instrumentation, we offer support from highly experienced staff with expertise in designing and conducting experiments and analyzing data. Many facilities can also provide training and education upon request. |
is listed by: ScienceExchange is related to: Nevada Proteomics Center has parent organization: University of Nevada at Reno; Nevada; USA |
SciEx_9375 | http://www.scienceexchange.com/facilities/university-of-nevada-reno | SCR_011008 | 2026-09-12 01:01:00 | 0 | |||||||||
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DTI Fiber Tract Statistics Resource Report Resource Website 1+ mentions |
DTI Fiber Tract Statistics (RRID:SCR_009460) | DTI Fiber Tract Statistics | data processing software, image analysis software, software application, software resource | This is a command line tool which allows the user to study the behavior of water diffusion (using DTI data) along the length of the white matter fiber-tracts. Various tract-oriented scalar diffusion measures obtained from DTI brain images, are treated as a continuous function of white matter fibers'' arc-length. To analyze the trend along a given fiber tract, a command line tool performs kernel regression on this data. The idea is to try out different noise models and maximum likelihood estimates within kernel windows (along the tract), such that they best represent the data and are robust to noise and Partial Volume effect. The package contains several command line based modules and an GUI based tool called DTIAtlasFiberAnalyzer to access most functions. The features available in the tool currently, its use and input / output formats and other relevant details are provided in the first draft of the documentation. (http://www.na-mic.org/Wiki/index.php/Projects:dtistatisticsfibers). | c, linux, magnetic resonance, posix/unix-like, regression, statistical operation, dti | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | 3D Slicer License | nlx_155606 | SCR_009460 | 2026-09-12 01:00:59 | 3 |
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