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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
ProteomeXchange
 
Resource Report
Resource Website
5000+ mentions
ProteomeXchange (RRID:SCR_004055) catalog, consortium, data or information resource, data repository, database, organization portal, portal, service resource, storage service resource A data repository for proteomic data sets. The ProteomeExchange consortium, as a whole, aims to provide a coordinated submission of MS proteomics data to the main existing proteomics repositories, as well as to encourage optimal data dissemination. ProteomeXchange provides access to a number of public databases, and users can access and submit data sets to the consortium's PRIDE database and PASSEL/PeptideAtlas. consortium, database, proteomics, MS proteomics, protein, mass spectrometry, bio.tools, FASEB list uses: Proteomics Identifications (PRIDE)
uses: PeptideAtlas
is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: bio.tools
is listed by: Debian
is affiliated with: Omics Discovery Index
is related to: Proteomics Identifications (PRIDE)
is related to: PeptideAtlas
is related to: SIB Swiss Institute of Bioinformatics
is related to: Mass spectrometry Interactive Virtual Environment (MassIVE)
is related to: European Bioinformatics Institute
is related to: ProteomeTools
is related to: Integrated Proteome Resources
has parent organization: European Bioinformatics Institute
European Union 260558 Public, The community can contribute to this resource r3d100012122, nlx_158620, biotools:proteomexchange http://proteomecentral.proteomexchange.org, https://bio.tools/proteomexchange, https://doi.org/10.17616/R32D29 SCR_004055 , ProteomeXchange, Proteome Exchange 2026-09-05 06:29:57 6107
Code Analysis Repository and Modelling for e-Neuroscience
 
Resource Report
Resource Website
10+ mentions
Code Analysis Repository and Modelling for e-Neuroscience (RRID:SCR_002795) CARMEN data or information resource, data repository, database, service resource, software repository, software resource, storage service resource THIS RESOURCE IS NO LONGER IN SERVICE.Documented on January 14, 2023. Infrastructure for sharing data, tools and services, this virtual research environment (VRE) supports e-Neuroscience and is designed to provide services for data and processing of that data. While the system is initially focused on electrophysiology data (neural activity recordings are the primary data types), it is equally applicable to many domains outside neuroscience. The Portal Provides: * User login and customization. * Data upload/download. * Data handling including custom permissions for public, shared or private data. * The ability to invoke custom public, shared or private services that consume and produce data. For example, it would allow spike series to be run through a sorter, producing new data representing the sorted spikes. * The ability to host services written in a number of languages including, but not limited to Matlab, R, Python, Perl, Java. * A system to support metadata for data objects, which provides extensive support for entering metadata at the point of upload, and allows the generation of metadata from services to provide provenance information. * The ability to invoke additional visualization for the data, for example, via the Signal Data Explorer. A core part is the development of: (i) minimum reporting guidelines for annotation of data and other computational resources for the purpose of sharing, and; (ii) intermediate formats and APIs for translation between proprietary and bespoke data types. These recommendations are being implemented and the global community is encouraged both to engage in their specification and make use of them for their own data sharing systems. * MINI: Minimum Information about a Neuroscience Investigation - This framework represents the formalized opinion of the CARMEN consortium and its associates, and identifies the minimum reporting information required to support the use of electrophysiology in a neuroscience study, for submission to the CARMEN system. * NDTF: Neurophysiology Data Translation Format - This framework provides a vendor-independent mechanism for translating between raw and processed neurphysiology data in the form of time and image series. They are implementing NDTF in CARMEN but it may also be useful for third party applications. neural activity recording, signal, image series, neurophysiology, data sharing, metadata standard, collaboration, electrophysiology, FASEB list has parent organization: Newcastle University; Newcastle upon Tyne; United Kingdom
is parent organization of: Retinal wave repository
EPSRC EP/E002331/1 PMID:20679128
PMID:18674883
THIS RESOURCE IS NO LONGER IN SERVICE r3d100012284, nif-0000-00442 https://doi.org/10.17616/R3W94G SCR_002795 Code Analysis Repository & Modelling for E-Neuroscience 2026-09-05 06:29:55 29
Sequence Tag Alignment and Consensus Knowledgebase Database
 
Resource Report
Resource Website
Sequence Tag Alignment and Consensus Knowledgebase Database (RRID:SCR_002156) data or information resource, data processing software, data visualization software, database, software application, software resource THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. The STACKdb is knowledgebase generated by processing EST and mRNA sequences obtained from GenBank through a pipeline consisting of masking, clustering, alignment and variation analysis steps. The STACK project aims to generate a comprehensive representation of the sequence of each of the expressed genes in the human genome by extensive processing of gene fragments to make accurate alignments, highlight diversity and provide a carefully joined set of consensus sequences for each gene. The STACK project is comprised of the STACKdb human gene index, a database of virtual human transcripts, as well as stackPACK, the tools used to create the database. STACKdb is organized into 15 tissue-based categories and one disease category. STACK is a tool for detection and visualization of expressed transcript variation in the context of developmental and pathological states. The data system organizes and reconstructs human transcripts from available public data in the context of expression state. The expression state of a transcript can include developmental state, pathological association, site of expression and isoform of expressed transcript. STACK consensus transcripts are reconstructed from clusters that capture and reflect the growing evidence of transcript diversity. The comprehensive capture of transcript variants is achieved by the use of a novel clustering approach that is tolerant of sub-sequence diversity and does not rely on pairwise alignment. This is in contrast with other gene indexing projects. STACK is generated at least four times a year and represents the exhaustive processing of all publicly available human EST data extracted from GenBank. This processed information can be explored through 15 tissue-specific categories, a disease-related category and a whole-body index exonic, expressed, expressed sequence tag (est), expression, fragment, gene, alignment, alternative gene, cdna, clone, cluster, developmental, disease, diversity, genome, homo sapiens, human, isoform, knowledgebase, meta-cluster, mrna, pathological, sequence, tissue, transcript, variant, visualization PMID:11125101 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-20946 SCR_002156 STACKdb 2026-09-05 06:29:54 0
Seg3D
 
Resource Report
Resource Website
100+ mentions
Seg3D (RRID:SCR_002552) Seg3D data processing software, data visualization software, image analysis software, image processing software, rendering software, segmentation software, software application, software resource A free volume processing segmenting tool that combines a flexible manual interface with powerful image processing and segmentation algorithms. Users can explore and label image volumes using slice windows and 3D volume rendering. analyze, c++, dicom, image display, linux, macos, microsoft, magnetic resonance, nrrd, posix/unix-like, rendering, segmentation, three dimensional display, visualization, volume rendering, win32 (ms windows), windows is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
has parent organization: University of Utah; Utah; USA
NIGMS 8 P41 GM103545-15 PMID:29083867 Free, Available for download, Freely available nlx_155959 http://www.nitrc.org/projects/seg3d SCR_002552 2026-09-05 06:29:55 106
UK Sheep Genome Mapping Project
 
Resource Report
Resource Website
1+ mentions
UK Sheep Genome Mapping Project (RRID:SCR_002272) data or information resource, database, portal, topical portal THIS RESOURCE IS NO LONGER IN SERVICE, documented August 23, 2016. The project aims to apply genome mapping research to sheep, utilizing previous research in sheep (in other countries) and in other species (in the UK and abroad) to the benefit of the UK sheep industry. The project itself uses existing breeding structures, knowledge of the sheep genome and experimental resources. It has three main aims: i) To use the Suffolk, Texel and Charollais Sire Referencing Schemes to detect and verify quantitative trait loci (QTLs) for growth and carcass composition traits ii) To investigate candidate genes and/or chromosomal regions for associations with production traits. iii) To investigate approaches for optimizing future genotyping strategies within the sire referencing schemes for practical and cost effective application of marker-assisted selection By using commercial breeding populations for the research, immediate application of beneficial results is possible. Potential benefits include increased genetic progress through marker assisted selection which utilizes the genotype information, correction of possible parentage errors (ultimately leading to additional genetic progress) and opportunities for using marker information for product certification. The project will benefit the UK sheep industry by the use of Marker Assisted Selection (MAS) utilizing QTL or gene variants identified in the project. Additional benefits may arise from parentage verification and correction of errors e.g. misallocation of lamb to ewe. In the longer term, opportunities may exist to use markers for quality control, tracing products to their source. The major advantage of the design of this project is that the results are immediately applicable to the breeding schemes within which the QTLs and/or genes are detected. The time lag in the application of the results that is often seen with experimental populations is minimized. The project requires close involvement with the Sire Reference Schemes, in return for their assistance the results have immediate benefit to animals within these groups. gene, animal, breed, breeding, chromosomal, chromosome, genome, genotype, genotyping, lamb, map, mapping, marker, population, production, region, sheep, specie, structure, trait THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-20995 SCR_002272 UKSGMP 2026-09-05 06:29:54 1
FrontalCortex.com
 
Resource Report
Resource Website
FrontalCortex.com (RRID:SCR_002667) curriculum material, data or information resource, narrative resource, short course material, slide, training material, video resource A free website for for neurologists, neurology residents, and medical students. Contains thousands of images, hundreds of multiple-choice review questions, dozens of educational videos, several user forums, and a couple of online courses. Created by a neurology resident, it is currently maintained by a neurologist and a neuropathologist, with contributions from people from around the world. FrontalCortex.com is a free resource for neurology education. The target audience is neurology residents and medical students. It features a bank of hundreds of boards-type review questions, all of which contain feedback and references to relevant articles or texts. It also has an image gallery with thousands of images, including EEGs, radiographs, illustrations, and over a thousand unique neuropathology images. Online courses in neuropathology and electrodiagnostic testing have been created on the site, and continue to be refined. These include dozens of educational videos. FrontalCortex.com was created by a neurology resident. That resident is now a neurologist, and the neurology program director at Marshall University, and continues to run the page, with the help of other physicians volunteering their time. All the content contributions are donated by volunteers, and are reviewed by physicians. Financial support for the page comes from advertisements on the page, and the occasional donation. No login is required, unless you want to contribute to the growing bank of educational resources, in which case you can create a free account. : :education, neurology, resident, neuropathology, board review, RITE exam : : education, board review, neurology, neuropathology, resident, rite exam Free, Freely available nif-0000-22726 SCR_002667 FrontalCortex 2026-09-05 06:29:55 0
Neal's DNA Mutation Site
 
Resource Report
Resource Website
1+ mentions
Neal's DNA Mutation Site (RRID:SCR_002947) Neal's DNA Mutation Site data analysis software, data or information resource, data processing software, database, portal, software application, software resource, topical portal This site provides access to mutation databases and software including the human hprt database, Human p53 database, Transgenic lacZ database, and Transgenic lacI database. Other avaialble programs include Mutational spectra comparison and relational database data entry. The most recent hprt database contains information on over 2,300 mutations found in vivo and in vitro in the human hprt gene and runs under Windows. The version for evaluation on this homepage has fewer mutations and is a DOS program. The database contains information on the mutagen, dose, spontaneous and induced mutant fraction, base position, amino acid position, amino acid change, local DNA sequence, cell type, citation, and other items. In addition, information regarding the cause and effect of mutations affecting splicing is given. Routines have been developed for the analysis of single base substitutions. The p53 database contains information on nearly 5,867 mutations found in the human p53 gene. The database itself has been updated in April of 1997. The database contains information on the cancer type, loss of heterozygosity, base position, amino acid position, amino acid change, local DNA sequence,citation, and other items. Routines have been developed for the analysis of single base substitutions. The Transgenic lacZ database contains information on 405 mutations found in vivo in the transgenic lacZ gene. It has last been updated in January of 1998. It provides information on the mutagen, dose, organ, mutant fraction, base position, amino acid position, amino acid change, local DNA sequence, citation, and other items. The Transgenic lacI database contains information on over 1700 mutations found in vivo in the transgenic lacI gene and on nearly 8000 mutations in the lacI gene in native E. coli. The database was updated in January 1998. The database contains information on the mutagen, dose, organ, mutant fraction, base position, amino acid position, amino acid change, local DNA sequence, citation, and other items. Routines have been developed for the analysis of single base substitutions for each of the databases. The software runs only on IBM-compatible PCs. human, mouse has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA Free, Available for download, Freely available nif-0000-02995 SCR_002947 Human p53 Human hprt Rodent lacI and Rodent lacZ Databases and Software, Human p53 Human hprt Rodent lacI and Rodent lacZ Databases, Human p53 Human hprt Rodent lacI Rodent lacZ Databases 2026-09-05 06:29:55 4
Pathway Analysis Tool for Integration and Knowledge Acquisition
 
Resource Report
Resource Website
1+ mentions
Pathway Analysis Tool for Integration and Knowledge Acquisition (RRID:SCR_002100) PATIKA data or information resource, database, pathway analysis software The human pathway database which contains different biological entities and reactions and software tools for analysis. PATIKA Database integrates data from several sources, including Entrez Gene, UniProt, PubChem, GO, IntAct, HPRD, and Reactome. Users can query and access this data using the PATIKAweb query interface. Users can also save their results in XML or export to common picture formats. The BioPAX and SBML exporters can be used as part of this Web service. human, pathway, reaction, database, pathway analysis software, web service, biological entity, biological reaction uses: Entrez Gene
uses: UniProt
uses: PubChem
uses: Gene Ontology
uses: IntAct
uses: HPRD - Human Protein Reference Database
uses: Reactome
PMID:12117798
PMID:14960461
THIS RESOURCE IS NO LONGER IS SERVICE. nif-0000-20882 http://www.cs.bilkent.edu.tr/~patikaweb/ SCR_002100 Pathway Analysis Tool for Integration and Knowledge Acquisition (PATIKA), PATIKA - Pathway Analysis Tools for Integration and Knowledge Acquisition 2026-09-05 06:29:54 2
Asian Cancer Research Group
 
Resource Report
Resource Website
1+ mentions
Asian Cancer Research Group (RRID:SCR_004001) ACRG consortium, data or information resource, data set, organization portal, portal An independent, not-for-profit consortium to accelerate research, and improve treatment for patients affected with the most commonly-diagnosed cancers in Asia by generating a genomic data resource for the most prevalent cancers in Asia. ACRG is focusing its initial efforts on Asian liver, gastric and lung cancers. Goals * Generate comprehensive genomics data sets for Asia-prevalent cancers * Conduct all research under good clinical practices and in accordance with local laws * Uncover key mutations and pathways for developing targeted therapies * Discover molecular tumor classifiers for patient stratification * Discover prognostic markers to identify high-risk patients * Freely share resulting raw data with scientific community to empower researchers globally and enable development of new diagnostics and medicines * Publish data analysis results jointly in prominent scientific journals Over the next two years, Lilly, Merck and Pfizer have committed to create an extensive pharmacogenomic cancer database that will be composed of data from approximately 2,000 tissue samples from patients with lung and gastric cancer that will be made publicly available to researchers and, over time, further populated with clinical data from a longitudinal analysis of patients. Comparison of the contrasting genomic signatures of these cancers could inform new approaches to treatment. Lilly has assumed responsibility for ultimately providing the data to the research public through an open-source concept managed by Lilly''''s Singapore research site. Moreover, Lilly, Merck and Pfizer will each provide technical and intellectual expertise. One dataset can be found at http://gigadb.org/dataset/100034 asia, genomics, drug discovery, liver, gastric, lung, database, whole genome-wide study, drug development, basic research, data sharing, drug, oncology, pharmacogenomic, tissue, clinical, longitudinal uses: Gene Expression Omnibus
uses: GigaDB
is listed by: Consortia-pedia
is related to: Merck
is related to: Pfizer Animal Genetics
is related to: BGI; Shenzhen; China
has parent organization: Merck
Eli Lilly and Company ;
Merck ;
Pfizer
nlx_158412 SCR_004001 2026-09-05 06:29:57 1
Monte Carlo Simulation Software: tMCimg
 
Resource Report
Resource Website
1+ mentions
Monte Carlo Simulation Software: tMCimg (RRID:SCR_002588) tMCimg simulation software, software application, software resource Software application that uses a Monte Carlo algorithm to model the transport of photons through 3D volumes with spatially varying optical properties. Both highly-scattering tissues (e.g. white matter) and weakly scattering tissues (e.g. cerebral spinal fluid) are supported. Using the anatomical information provided by MRI, X-ray CT, or ultrasound, accurate solutions to the photon migration forward problems are computed in times ranging from minutes to hours, depending on the optical properties and the computing resources available. c, computed tomography, macos, microsoft, modeling, monte carlo, magnetic resonance, optical imaging, posix/unix-like, windows, mri, x-ray ct, ultrasound, photon is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) PMID:19424345 Free, Available for download, Freely available nlx_155993 http://www.nitrc.org/projects/tmcimg SCR_002588 Monte Carlo Photon Transport 2026-09-05 06:29:55 1
HCV Databases
 
Resource Report
Resource Website
50+ mentions
HCV Databases (RRID:SCR_002863) HCV Databases data or information resource, disease-related portal, portal, topical portal The Hepatitis C Virus (HCV) Database Project strives to present HCV-associated genetic and immunologic data in a user-friendly way, by providing access to the central database via web-accessible search interfaces and supplying a number of analysis tools. hcv, hepatitis c virus, hepatitis c, database, data analysis service, sequence, immunology, annotation, FASEB list has parent organization: HIV Databases
is parent organization of: HCV Sequence Database
is parent organization of: HCV Immunology Database
Hepatitis C NIAID Free, Freely available nif-0000-02944 SCR_002863 Hepatitis C Virus Database, Hepatitis C Virus Database Project, HCV Database, Hepatitis C Virus Databases, Hepatitis C Virus (HCV) Database Project 2026-09-05 06:29:55 71
Annotation Ontology
 
Resource Report
Resource Website
1+ mentions
Annotation Ontology (RRID:SCR_002862) AO controlled vocabulary, data or information resource, ontology Provides vocabulary for performing several types of annotation - comment, entities annotation (or semantic tags), textual annotation (classic tags), notes, examples, erratum... - on any kind of electronic document (text, images, audio, tables...) and document parts. AO is not providing any domain ontology but it is fostering the reuse of the existing ones for not breaking the principle of scalability of the Semantic Web. annotation, semantic tag, text mining, semantic web, standard is listed by: FORCE11
is related to: Annotea
is related to: W3C Open Annotation Community Group
is related to: DOMEO
has parent organization: Harvard Medical School; Massachusetts; USA
EMD Serono ;
Inc. ;
Eli Lilly and Company
PMID:21624159 Free, Freely available, Available for download nif-0000-02943 https://www.force11.org/node/4718 SCR_002862 AO - Annotation Ontology, annotation-ontology 2026-09-05 06:29:55 1
System for Earth Sample Registration
 
Resource Report
Resource Website
10+ mentions
System for Earth Sample Registration (RRID:SCR_002222) SESAR catalog, data or information resource, database Sample Catalog and Registry for the International Geo Sample Number. SESAR catalogs and preserves sample metadata profiles, and provides access to the sample catalog via the Global Sample Search. international geo sample number, metadata, sample, biology, gas, liquid, mineral, particulate, rock, sediment, soil, register is listed by: CINERGI
has parent organization: EarthChem
NSF Free, Freely available nlx_154747, r3d100010420 https://doi.org/10.17616/R3H89M SCR_002222 2026-09-05 06:29:54 14
YLoc
 
Resource Report
Resource Website
10+ mentions
YLoc (RRID:SCR_002464) YLoc analysis service resource, data access protocol, data analysis service, production service resource, service resource, software resource, web service An interpretable web server for predicting subcellular localization. In addition to the predicted location, YLoc gives a reasoning why this prediction was made and which biological properties of the protein sequence lead to this prediction. Moreover, a confidence estimate helps users to rate predictions as trustworthy. YLoc+ is able to predict the location of multiple-targeted proteins with high accuracy. The YLoc webserver is also accessible via SOAP. subcellular localization, protein is listed by: OMICtools
has parent organization: University of Tubingen; Tubingen; Germany
PMID:20507917
PMID:20299325
Acknowledgement requested OMICS_01638 SCR_002464 Yloc - Interpretable Subcellular Localization Prediction 2026-09-05 06:29:55 36
ngLOC
 
Resource Report
Resource Website
10+ mentions
ngLOC (RRID:SCR_003150) ngLOC analysis service resource, data analysis service, production service resource, service resource, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 5, 2023.An n-gram-based Bayesian classifier that predicts subcellular localization of proteins both in prokaryotes and eukaryotes. The downloadable version of this software with source code is freely available for academic use under the GNU General Public License. subcellular localization, protein, eukaryote, prokaryote, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
PMID:22780965
PMID:17472741
THIS RESOURCE IS NO LONGER IN SERVICE OMICS_01629, biotools:ngloc https://bio.tools/ngloc SCR_003150 ngLOC - A Bayesian method for predicting protein subcellular localization 2026-09-05 06:29:56 22
Ontology for Parasite LifeCycle
 
Resource Report
Resource Website
Ontology for Parasite LifeCycle (RRID:SCR_003427) OPL controlled vocabulary, data or information resource, ontology A reference ontology that models the life cycle stage details of various parasites, including Trypanosoma sp., Leishmania major, and Plasmodium sp., etc. In addition to life cycle stages, the ontology also models necessary contextual details, such as host information, vector information, and anatomical location. OPL is based on the Basic Formal Ontology (BFO) and follows the rules set by the OBO Foundry consortium. owl, parasite, life cycle, host, vector, anatomical location is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is related to: Information Artifact Ontology
Free, Available for download, Freely available nlx_157521 https://github.com/OPL-ontology/OPL SCR_003427 2026-09-05 06:29:56 0
University of California at Los Angeles, School of Medicine: Neuro Imaging Lab of Thompson
 
Resource Report
Resource Website
University of California at Los Angeles, School of Medicine: Neuro Imaging Lab of Thompson (RRID:SCR_001924) curriculum material, data or information resource, narrative resource, slide, training material, video resource The UCLA laboratory of neuroimaging is working in several areas to enhance knowledge of anatomy, including brain mapping in large human populations, HIV, Schizophrenia, methamphetamine, tumor growth and 4d brain mapping, genetics and detection of abnormalities. engineer, genetics, abnormality, alzheimer's, anatomy, atlas, brain, computational, cortical, dementia, disease, growth, histologic, hiv, human, image, knowledge, mapping, mathematical, mathematician, medical doctor, methamphetamine, model, mri, neuroscientist, pet, polymorphism, population, schizophrenia, spect, structure, tumor, neuroimaging has parent organization: University of California at Los Angeles; California; USA THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-10496 SCR_001924 UCLA, Thompson Lab 2026-09-05 06:29:54 0
Antarctic Glaciological Data Center
 
Resource Report
Resource Website
Antarctic Glaciological Data Center (RRID:SCR_002219) AGDC data or information resource, data repository, data set, service resource, storage service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 2, 2025. Archives and distributes Antarctic glaciological and cryospheric system data collected by the U.S. Antarctic Program. The Data Catalog contains data sets collected by individual investigators and products assembled from many different PI data sets, published literature, and other sources. The catalog provides useful compilations of important geophysical parameters, such as accumulation rate or ice velocity. The NSF OPP Guidelines and Award Conditions for Scientific Data state that PIs should submit data collected as a result of their OPP grant to a designated data center as soon as possible, but no later than two years after the data are collected. antarctic, glaciology, atmosphere, glacier, ice sheet, land surface, paleoclimate, ice core, sea ice, smow, land ice, spectral, engineering is listed by: CINERGI
has parent organization: National Snow and Ice Data Center
NSF OPP ANT 0944763 THIS RESOURCE IS NO LONGER IN SERVICE. nlx_154741, r3d100011579 https://doi.org/10.17616/R3KH07 SCR_002219 Antarctic Glaciological Data Center at the National Snow and Ice Data Center, Antarctic Glaciological Data Center at NSIDC 2026-09-05 06:29:54 0
Ontology for Genetic Interval
 
Resource Report
Resource Website
Ontology for Genetic Interval (RRID:SCR_003423) OGI controlled vocabulary, data or information resource, ontology An ontology that formalized the genomic element by defining an upper class genetic interval using BFO as its framework. The definition of genetic interval is the spatial continuous physical entity which contains ordered genomic sets (DNA, RNA, Allele, Marker,etc.) between and including two points (Nucleic_Acid_Base_Residue) on a chromosome or RNA molecule which must have a liner primary sequence structure. owl, genomic, genetic, dna, rna, allele, marker, chromosome, rna molecule is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is related to: Information Artifact Ontology
Free, Available for download, Freely available nlx_157517 https://bioportal.bioontology.org/ontologies/OGI SCR_003423 2026-09-05 06:29:56 0
MorphBank
 
Resource Report
Resource Website
10+ mentions
MorphBank (RRID:SCR_003147) Morphbank data or information resource, data repository, database, image repository, service resource, storage service resource An NSF supported image repository of over 374,000 high-resolution photographs of approximately 4,000 species for research and education, used largely but not exclusively in the area of biodiversity research. Images can be annotated by users and browsed by specimen, view, taxonomy, location, collection, or annotation. anatomy, phylogenetics, taxonomy, biodiversity, image, photographic, biological specimen, biology, herbaria, botany, entomology, morphology, phylogeny, evolution is listed by: re3data.org
has parent organization: Florida State University; Florida; USA
NSF DBI-0446224 Free, Freely available nlx_156841, r3d100010566 https://doi.org/10.17616/R30P5K SCR_003147 Morphbank : Biological Imaging 2026-09-05 06:29:56 28

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