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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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ProQ3 Resource Report Resource Website 10+ mentions |
ProQ3 (RRID:SCR_021880) | data access protocol, software resource, web service | Improved model quality assessments using Rosetta energy terms. Predictor combines training features from ProQRosCen, ProQRosFA and ProQ2. | model quality assessments, model quality prediction | Swedish eScience Research Center ; Swedish Research Council |
DOI:10.1038/srep33509 | Free, Freely available | SCR_021880 | Proq3 | 2026-09-05 06:29:47 | 11 | ||||||||
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Narishige: MF 830 Microgrinder Resource Report Resource Website 1+ mentions |
Narishige: MF 830 Microgrinder (RRID:SCR_022055) | instrument resource | Powerful microscope mounted to produce microelectrodes for patch clamping. | microscope, patch clamping, microelectrode, produce microelectrode, microforge, polish microelectrode tips, instrument, equipment, USEDit | is listed by: USEDit | Restricted | SCR_022055 | Narishige MF-830 Microgrinder | 2026-09-05 06:29:49 | 1 | |||||||||
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Colorado School of Mines; Golden; Colorado Resource Report Resource Website 1+ mentions |
Colorado School of Mines; Golden; Colorado (RRID:SCR_022054) | data or information resource, portal, topical portal | Public research university in Golden, Colorado, founded in 1874. School offers both undergraduate and graduate degrees in engineering, science, and mathematics, with focus on energy and environment. |
is parent organization of: Colorado School of Mines Shared Instrumentation Facility X-ray Diffraction and Computed Tomography Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Liquid Chromotography Mass Spectrometry Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Mechanical Testing Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Rocky Mountain Environmental X-Ray Photoelectron Spectroscopy Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Time of Flight Secondary Ion Mass Spectrometry Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Electron and Scanning Probe Microscopy Core Facility is parent organization of: Colorado School of Mines Shared Instrumentation Facility Surface Characterization and Thin Film Deposition Core Facility |
SCR_022054 | 2026-09-05 06:29:49 | 1 | ||||||||||||
|
ProSA web Resource Report Resource Website 100+ mentions |
ProSA web (RRID:SCR_021879) | data access protocol, software resource, web service | Interactive web service for recognition of errors in three dimensional structures of proteins. | structure errors recognition, proteins three dimensional structures, protein structure errors | FWF Austria ; University of Salzburg Austria |
PMID:17517781 | Free, Freely available | SCR_021879 | ProSA-web | 2026-09-05 06:29:47 | 474 | ||||||||
|
GeoMapApp Resource Report Resource Website 50+ mentions |
GeoMapApp (RRID:SCR_021919) | software resource, web application | Web tool as map based application for browsing, visualizing and analyzing diverse suite of curated global and regional geoscience data sets. These cover geophysics, geology, geochemistry, physical oceanography, climatology, and more. Runs with Java under Windows, Mac OS X, Linux and Unix/Solaris operating systems. | Marine Geoscience Data System, Lamont-Doherty Earth Observatory, geoscience data sets, browsing curated geoscience data, visualizing curated geoscience data, analyzing curated geoscience data |
is related to: Marine Geoscience Data System has parent organization: Columbia University; New York; USA |
Free, Available for download, Freely available | SCR_021919 | 2026-09-05 06:29:48 | 65 | ||||||||||
|
HOBOware Pro Resource Report Resource Website 1+ mentions |
HOBOware Pro (RRID:SCR_021915) | software resource | Weather data logging software used for all HOBO data loggers and wireless data nodes. Used to read out and plot data, and export to spreadsheets for further analysis. | Data logging software, HOBO data loggers, wireless data nodes, Onset, HOBO | Restricted | SCR_021915 | Data loger HOBO | 2026-09-05 06:29:48 | 1 | ||||||||||
|
Resonance Technology: VisuaStimDigital Resource Report Resource Website |
Resonance Technology: VisuaStimDigital (RRID:SCR_021892) | instrument resource | Audio visual stimulation system for functional MRI (fMRI) applications. | Audio visual stimulation system, functional MRI, fMRI, Resonance Technology Inc. | Restricted | SCR_021892 | 2026-09-05 06:29:47 | 0 | |||||||||||
|
Izon Control Suite Resource Report Resource Website 1+ mentions |
Izon Control Suite (RRID:SCR_021922) | software resource | Data acquisition software. Allows raw or filtered measurement data to be viewed in real time. Part of qNano system. Izon Control Suite Software V3.4 is maintenance software release that updates Izon current software. | Izon Science Ltd, data acquisition, nanotechnology | is related to: Izon: qNano Gold | Free, Available for download, Freely available | https://support.izon.com/how-can-i-get-the-latest-software-release | SCR_021922 | qNano Control Suite Software, Izon Control Suite Software V3.4, Izon Control Suite Software, Izon qNano Control Suite Software | 2026-09-05 06:29:48 | 3 | ||||||||
|
University of Puerto Rico Caribbean Primate Research Center Resource Report Resource Website 50+ mentions |
University of Puerto Rico Caribbean Primate Research Center (RRID:SCR_021920) | CPRC | biomaterial supply resource, material resource, organism supplier | Facilitates supply of conventional and specific pathogen free nonhuman primates and biological samples. Priority is given to NIH-funded investigators in universities, NIH Intramural Program, and contractors working on behalf of researchers conducting experiments under NIH-funded programs. Non-NIH-funded investigators may still be considered depending on resource availability.To request for CPRC animals, authorized representative of institution will need to submit Animal Allocation Request form. | CPRC Resource Distribution, rhesus macaques, nonhuman primates supply, biological samples supply, resource distribution, Conventional and Specific Pathogen Free nonhuman primates | has parent organization: University of Puerto Rico; Puerto Rico; USA | Restricted | SCR_021920 | University of Puerto Rico Caribbean Primate Research Center Resource Distribution Core | 2026-09-05 06:29:48 | 76 | ||||||||
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Bio-Rad: T100 Thermal Cycler Resource Report Resource Website 1+ mentions |
Bio-Rad: T100 Thermal Cycler (RRID:SCR_021921) | instrument resource | Small compact 96well thermal cycler. PCR system features intuitive touch screen and thermal gradient technology to optimize reaction in single run. | BioRad, 96well thermal cycler, thermal cycler, PCR system, RT PCR, touch screen, thermal gradient technology, instrument, equipment, USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_021921.pdf | Model_Number_T100_Thermal_Cycler | SCR_021921 | T100 Thermal Cycler | 2026-09-05 06:29:48 | 7 | |||||||||
|
MFDp2 Resource Report Resource Website 1+ mentions |
MFDp2 (RRID:SCR_021885) | data access protocol, software resource, web service | Web tool for accurate prediction of disorder in proteins by fusion of disorder probabilities, content and profiles. | protein disorder, accurate prediction, disorder in proteins, disorder prediction, disorder probabilities | Natural Sciences and Engineering Research Council of Canada ; University of Alberta |
PMID:28516009 | Free, Freely available | SCR_021885 | Multilayered Fusion based Disorder predictor v. 2.00 | 2026-09-05 06:29:47 | 4 | ||||||||
|
PrDOS Resource Report Resource Website 10+ mentions |
PrDOS (RRID:SCR_021886) | data access protocol, software resource, web service | Web server to predict natively disordered regions of protein chain from its amino acid sequence. Returns disorder probability of each residue as prediction results. | predict natively disordered regions, protein chain, protein chain prediction, disordered regions, disorder probability | SCR_021886 | 2026-09-05 06:29:47 | 39 | ||||||||||||
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3DRefine Resource Report Resource Website 10+ mentions |
3DRefine (RRID:SCR_021883) | data access protocol, software resource, web service | Interactive web server for efficient protein structure refinement with capability to perform web based statistical and visual analysis. | efficient protein structure refinement, statistical and visual analysis | NIGMS R01 GM093123 | DOI:10.1093/nar/gkw336 | Free, Freely available | SCR_021883 | 2026-09-05 06:29:47 | 32 | |||||||||
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JSpeciesWS Resource Report Resource Website 10+ mentions |
JSpeciesWS (RRID:SCR_022059) | data access protocol, software resource, web service | Web server for prokaryotic species circumscription based on pairwise genome comparison. Service for in silico calculating extent of identity between two genomes, parameter routinely used in process of polyphasic microbial species circumscription. Service measures average nucleotide identity. | prokaryotic species circumscription, pairwise genome comparison, average nucleotide identity measurement | European Community Seventh Framework Programme | PMID:26576653 | Free, Freely available | SCR_022059 | JSpecies Web Server | 2026-09-05 06:29:49 | 33 | ||||||||
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HaploMaker Resource Report Resource Website 1+ mentions |
HaploMaker (RRID:SCR_021928) | software resource | Software pipeline for haplotype assembly of diploid genomes using paired end or PacBio reads. | haplotype assembly, diploid genomes, paired end reads, PacBio reads | Free, Available for download, Freely available | SCR_021928 | 2026-09-05 06:29:48 | 1 | |||||||||||
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LINUCS Resource Report Resource Website |
LINUCS (RRID:SCR_001571) | LINUCS | analysis service resource, data analysis service, production service resource, service resource, software resource, source code | Service that directly converts the commonly used extended representation of complex carbohydrates into the preferred canonical description or into its inverted form. Input: A structure using the extended, non-graphic nomenclature (in ASCII writing) to describe complex carbohydrates as recommended by IUPAC. Output: A linear, unique notation. The source code (written in C), will be distributed so that software developers can easily implement their algorithm within their own application. LINUCS was chosen to fulfill to following conditions: * Input of extended, non-graphic nomenclature to describe carbohydrate structures. * Resulting linear code is closely related to notations and abbreviations recommended by IUPAC. * Number of additional rules to define the priority of the branches is low * Extended nomenclature of complex carbohydrates contains all information to define the hierarchy. * LINUCS is applicable to all types of carbohydrates (macrocyclic system are currently not implemented) . * Remaining unassigned linkage information are tolerated | carbohydrate, notation, structure, carbohydrate sequence, canonical description, glycodatabase, glycobioinformatics, algorithm, molecule, sequence |
is related to: sumo is related to: pdb2linucs has parent organization: glycosciences.de |
PMID:11675023 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152883 | SCR_001571 | LINUCS: LInear Notation for Unique description of Carbohydrate Sequences, LInear Notation for Unique description of Carbohydrate Sequences | 2026-09-05 06:29:53 | 0 | ||||||
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Fujifilm: Vevo 3100 Imaging System Resource Report Resource Website 1+ mentions |
Fujifilm: Vevo 3100 Imaging System (RRID:SCR_022152) | Vevo 3100 | instrument resource | Vevo 3100 micro ultrasound imaging system reduces speckle noise and artifacts while preserving and enhancing critical information for small animal in vivo studies. System helps you visualize your data at high resolution. | Ultrasound, FUJIFILM Visualsonics, Inc., ultrasound imaging system, instrument, equipment, USEDit | is listed by: USEDit | Restricted | SCR_022152 | Vevo 3100 micro ultrasound imaging system | 2026-09-05 06:29:51 | 9 | ||||||||
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Mathematical Modelling Ontology Resource Report Resource Website |
Mathematical Modelling Ontology (RRID:SCR_000910) | MAMO | controlled vocabulary, data or information resource, ontology | Ontology that is a classification of the types of mathematical models used mostly in the life sciences, their variables, relationships and other relevant features. | owl | is listed by: BioPortal | nlx_157467 | SCR_000910 | 2026-09-05 06:29:53 | 0 | |||||||||
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Interactome Wiki Resource Report Resource Website |
Interactome Wiki (RRID:SCR_000750) | data or information resource, narrative resource, wiki | This Wiki page provides information about Interactome of various species. An interactome of a species provides an important clues on how to interpret metabolic pathways of constituent enzymes and global protein network, which facilitates in turn to understand the mechanism responsible for the cellular functions. | enzyme, function, animal, bacterial, cellular, interactome, mechanism, metabolic, pathway, plant, protein, species | nif-0000-10260 | SCR_000750 | Interactome | 2026-09-05 06:29:52 | 0 | ||||||||||
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National Microbiome Data Collaborative Resource Report Resource Website 1+ mentions |
National Microbiome Data Collaborative (RRID:SCR_022161) | NMDC | data or information resource, portal, topical portal | Platform facilitates comprehensive discovery of and access to multidisciplinary microbiome data in order to unlock new possibilities with microbiome data science. Multi organizational effort to integrate microbiome data across diverse areas in medicine, agriculture, bioenergy, and environment. Founded to support long term advancement of microbiome science. | Microbiome data exploration and discovery, microbiome data, microbiome data science ecosystem, microbiome data, microbiome data discovery portal, FAIR, FAIRsharing | Free, Freely available | https://github.com/microbiomedata/nmdc-schema | SCR_022161 | 2026-09-05 06:29:51 | 2 |
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