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https://www.standardbio.com/

American company engaged in design, manufacture and sale of biological research equipment based on integrated fluidic circuit technology. Founders leveraged their semiconductor experience to create integrated circuits that carried fluids rather than electrons.

Proper citation: Standard BioTools (RRID:SCR_023606) Copy   

•   Source: SciCrunch Registry

https://www.ionpath.com/

Pioneer in high definition spatial proteomics, tissue imaging and analysis to accelerate medical discovery and improve human health. With MIBI technology and expertise of pathology and data science teams, Ionpath provides actionable insights to translational and clinical researchers at leading pharmaceutical, biotechnology, and research organizations in immuno-oncology, immunology, neuroscience, and infectious disease research.

Proper citation: Ionpath (RRID:SCR_023605) Copy   

•   Source: SciCrunch Registry

https://www.keyence.com/

Direct sales organization that develops and manufactures automation sensors, vision systems, barcode readers, laser markers, measuring instruments, and digital microscopes. Founder Takemitsu Takizaki. Headquarters Osaka, Osaka, Japan.

Proper citation: Keyence (RRID:SCR_023604) Copy   

•   Source: SciCrunch Registry

https://pypi.org/project/oncoboxlib/

Software library to calculate Pathways Activation Levels. It takes file that contains gene symbols in HGNC format, their expression levels for one or more samples and calculates PAL values for each pathway in each sample.

Proper citation: oncoboxlib (RRID:SCR_023722) Copy   

•   Source: SciCrunch Registry

https://github.com/KumarLabJax/JABS-behavior-classifier

Video based phenotyping platform for laboratory mouse. Provides complete details of software and hardware, including 3D designs used for data collection. Data acquisition system consists of video collection hardware and software, behavior labeling and active learning app, and online database for sharing classifiers. Hardware and software solution collects high quality data for behavior analysis.

Proper citation: JAX Animal Behavior System (RRID:SCR_023721) Copy   

•   Source: SciCrunch Registry

https://industry.nikon.com/en-us/products/x-ray-ct/xt-h-225-xt-h-320/

Provides insight into the inside of components and specimens, allowing users to visualize, analyze and measure complex internal geometry as well as surfaces, all non-destructively. Versatile microfocus CT system for high resolution inspection in R&D and failure analysis of components ranging from tiny plastic connectors up to aluminum castings.

Proper citation: Nikon: XT H 225 ST uCT system (RRID:SCR_023687) Copy   

•   Source: SciCrunch Registry

https://andor.oxinst.com/

Provides development and manufacture of high performance scientific digital cameras, microscopy systems and spectrographs for academic, industrial and government applications.

Proper citation: Andor (RRID:SCR_023609) Copy   

•   Source: SciCrunch Registry

https://www.bruker.com/en.html

Bruker Daltonics is subsidary of Bruker Corporation American. Bruker is manufacturer of scientific instruments for molecular and materials research, as well as for industrial and applied analysis.

Proper citation: Bruker Daltonics (RRID:SCR_023608) Copy   

•   Source: SciCrunch Registry

https://ngdc.cncb.ac.cn/databasecommons/

Curated catalog of worldwide biological databases to provide landscape of biological databases throughout the world and enable easy retrieval and access to specific collection of databases of interest. Catalog of worldwide biological databases as well as their curated meta information and derived statistics.

Proper citation: Database Commons (RRID:SCR_023661) Copy   

•   Source: SciCrunch Registry

https://github.com/vpc-ccg/svict

Software tool for detecting structural variations from cell free DNA containing low dilutions of circulating tumor DNA.

Proper citation: SViCT (RRID:SCR_023656) Copy   

•   Source: SciCrunch Registry

https://pmc.ncbi.nlm.nih.gov/articles/PMC4525701/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 25,2025. Web tool to parse Sanger sequencing chromatograms with double peaks into wildtype and alternative allele sequences. Used to separate chromatogram data containing ambiguous base calls into wildtype and mutant allele sequences.Used for identification of unknown indels using sanger sequencing of polymerase chain reaction products.

Proper citation: Poly Peak Parser (RRID:SCR_023776) Copy   

•   Source: SciCrunch Registry

https://github.com/emo-bon/MetaGOflow

Software pipeline for marine Genomic Observatories data analysis. Used to address challenges of analysis of European Marine Omics Biodiversity Observation Network data.

Proper citation: metaGOflow (RRID:SCR_023674) Copy   

•   Source: SciCrunch Registry

http://www.proteomesoftware.com/products/scaffold/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 1,2023. Visualize and validate complex MS/MS proteomics experiments

Proper citation: Scaffold (RRID:SCR_014321) Copy   

•   Source: SciCrunch Registry

https://www.10xgenomics.com/instruments/xenium-analyzer

Xenium Analyzer offers subcellular profiling of 100s to 1,000s of RNA targets alongside multiplexed protein, in fresh, frozen or FFPE tissue.

Proper citation: 10x Genomics: Xenium Analyzer (RRID:SCR_023910) Copy   

•   Source: SciCrunch Registry

https://github.com/eMetaboHUB/Forum-LiteraturePropagation

Method extending ’guilt by association’ principle to literature information by using Bayesian framework to suggest diseases associated with overlooked metabolites.

Proper citation: Forum Literature Propagation (RRID:SCR_023874) Copy   

•   Source: SciCrunch Registry

https://www.shoprainin.com/Pipettes/Single-Channel-Manual-Pipettes/Pipet-Lite-XLS-LTS/Pipet-Lite-LTS-Pipette-L-1000XLS%2B/p/17014382

Pipet-Lite™ XLS+ manual single-channel pipette, 100-1000 μL, uses LTS™ LiteTouch™ tips. Accurate and precise, ergonomic, autoclavable liquid end, rugged and durable (L-1000XLS+)

Proper citation: Rainin: Pipet-Lite LTS Pipette L-1000XLS+ (RRID:SCR_023894) Copy   

•   Source: SciCrunch Registry

https://www.shoprainin.com/Pipettes/Single-Channel-Manual-Pipettes/Pipet-Lite-XLS-LTS/Pipet-Lite-LTS-Pipette-L-200XLS%2B/p/17014391

Pipet-Lite™ XLS+ manual single-channel pipette, 20-200 μL, uses LTS™ LiteTouch™ tips. Accurate and precise, ergonomic, autoclavable liquid end, rugged and durable (L-200XLS+)

Proper citation: Rainin: Pipet-Lite LTS Pipette L-200XLS+ (RRID:SCR_023892) Copy   

•   Source: SciCrunch Registry

https://www.nikon.com/company/news/2018/0319_nsim_s_01.html

Microscope enables super solution imaging of live cells at ten times the speed of conventional SIM. Powered by ECLIPSE Ti2-E Inverted Research Microscope, taking advantage of its advanced optics, stability and features.

Proper citation: Nikon: N-SIM S Super Resolution Microscope (RRID:SCR_023803) Copy   

•   Source: SciCrunch Registry

https://www.hitachi-keu.com/en-gb/iv/hv-f203gvscl.html

High resolution 1/1.8" 3 CCD Progressive Scan Color Camera with 1600 x 1200 pixel (UXGA) that is installed in the ZEISS Axioscan Z1 slide scanner. Integrated functions include electronic shutter from 1/30s to 1/100000s, Long term Integration up to 4s, AGC, external Trigger, Auto Shading, 6 Colour Masking, Frame-On-Demand Function, White Balance, AGC, Black Level Adjustment and Partial Scan Function.

Proper citation: Hitachi: 16-bit 3-CCD color camera HV-F203GV / HV-F203SCL (RRID:SCR_023888) Copy   

•   Source: SciCrunch Registry

https://de.moleculardevices.com/products/microplate-readers/multi-mode-readers/spectramax-id3-id5-readers

Microplate reader to measure absorbance, fluorescence and luminescence.

Proper citation: Molecular Devices: SpectraMax iD3 multi-mode microplate reader (RRID:SCR_023920) Copy   

•   Source: SciCrunch Registry