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https://mai.ku.edu/

Core laboratory in Room 1043 in Haworth Hall at the University of Kansas Lawrence campus.Provides life and physical sciences and engineering users with wide spectrum of sample preparation tools and techniques and imaging technologies.Provides training for undergraduate, graduate students, postdoctoral researchers, faculty, staff, and industry collaborators.

Proper citation: University of Kansas Microscopy and Analytical Imaging Research Resource Core Facility (RRID:SCR_021801) Copy   

•   Source: SciCrunch Registry

https://research.utk.edu/research-facilities/core-facilities/bmsc/

Mass Spectrometry Core provides metabolomics, lipidomics, and small molecule analyses to researchers both on campus and in our affiliated local and other institutions.

Proper citation: University of Tennessee Knoxville Biological Mass Spectrometry Core Facility (RRID:SCR_021368) Copy   

•   Source: SciCrunch Registry

https://github.com/ribeiro-lab/flyPAD-fpga

FPGA code for running main board of flyPAD. Code written in VHDL using Quartus 2 web edition software.

Proper citation: flyPAD (RRID:SCR_021522) Copy   

•   Source: SciCrunch Registry

https://research.utexas.edu/cbrs/cores/transgenics/

Provides services to generate, cryopreserve, and recover transgenic mice for modeling human disease.MGEF is fully equipped to make genetically engineered mice and is staffed with skilled personnel with decades of transgenic experience.Generates transgenic mice for studying mammalian gene function and modeling human disease, cryopreserves and archives transgenic mouse lines.

Proper citation: University of Texas at Austin Mouse Genetic Engineering Core Facility (RRID:SCR_021927) Copy   

•   Source: SciCrunch Registry

https://training.incf.org

Portal that provides multimedia educational content from courses, conference lectures, and laboratory exercises from some of leading neuroscience institutes and societies to be more accessible to global neuroscience community.

Proper citation: TrainingSpace (RRID:SCR_022036) Copy   

•   Source: SciCrunch Registry

https://www.cellscale.com/products/microtester/

System includes MicroTester G2 device and software. MicroTester G2 is mechanical test device that can be used to test properties of variety of tissues and materials. Main components of device are load application microbeam, actuators, imaging system, and fluid bath/test chamber. MicroTester G2 software is divided into two modules: data collection module and review and analysis module.

Proper citation: CellScale: MicroTester G2 system (RRID:SCR_022034) Copy   

•   Source: SciCrunch Registry

http://www.ssu.ac.ir

Public university located in center of Iran in World Heritage city of Yazd.

Proper citation: Shahid Sadoughi University of Medical Sciences; Yazd; Iran (RRID:SCR_022031) Copy   

•   Source: SciCrunch Registry

https://canadu.com/

Software tool for learning fundamentals of RSLogix ladder logic programming.

Proper citation: LogiXPro (RRID:SCR_021978) Copy   

•   Source: SciCrunch Registry

http://www.plafornea.com.ar/

Software allows estimating growth and production at stand level of main forest species implanted in Argentine Mesopotamia such as Pino taeda, Eucalyptus grandis, Pino elliottii and Araucaria angustifolia. Areas for which models were adjusted correspond to province of Misiones, northeast of Corrientes and Concordia in province of Entre Ríos.

Proper citation: PlaForNEA (RRID:SCR_022027) Copy   

•   Source: SciCrunch Registry

https://www.coolled.com/products/pe-300ultra/

Highly controllable fluorescence microscopy Illumination System which offers broad spectrum LED illumination for imaging most common fluorophores. System offers precise control over wavelength irradiance and shuttering. Used for LED microscope lighting.

Proper citation: CoolLED: pE-300ultra (RRID:SCR_021972) Copy   

•   Source: SciCrunch Registry

https://simulabeta.sourceforge.io/

Software tool as simulation program for insulin glucose feedback control. Based on nonlinear MiMe-NoCoDI model.

Proper citation: SimulaBeta (RRID:SCR_021900) Copy   

•   Source: SciCrunch Registry

https://osf.io/xfpn4/

MDAR Framework establishes minimum set of requirements in transparent reporting applicable to studies in life sciences. MDAR checklist is tool for authors, editors and others seeking to adopt MDAR framework for transparent reporting in manuscripts and other outputs and designed to provide harmonizing principle for reporting requirements currently in use at various journals.

Proper citation: MDAR (RRID:SCR_022038) Copy   

•   Source: SciCrunch Registry

https://github.com/QZH2022/germline_flow

High performance of GPU accelerated variant calling tool in genome data analysis.

Proper citation: germline flow (RRID:SCR_021906) Copy   

•   Source: SciCrunch Registry

https://github.com/vlink/marge

Software package that integrates genome wide genetic variation with epigenetic data to identify collaborative transcription factor pairs. Optimized to work with chromatin accessibility assays such as ATAC-seq or DNase I hypersensitivity, as well as transcription factor binding data collected by ChIP-seq. Used to identify combinations of cell type specific transcription factors while simultaneously interpreting functional effects of non-coding genetic variation.

Proper citation: Motif Mutation Analysis for Regulatory Genomic Elements (RRID:SCR_021902) Copy   

•   Source: SciCrunch Registry

http://bioinfo.jialab-ucr.org/CancerMIRNome/

Web server for cancer miRNome interactive analysis and visualization based on human miRNome data of cancer types from The Cancer Genome Atlas, and public cancer circulating miRNome profiling datasets from NCBI Gene Expression Omnibus and ArrayExpress. Comprehensive database for interactive analysis and visualization of miRNA expression profiles.

Proper citation: CancerMIRNome (RRID:SCR_022092) Copy   

•   Source: SciCrunch Registry

http://ceumass.eps.uspceu.es/

Software tool for searching metabolites in different databases including Kegg, HMDB, LipidMaps, Metlin, NP Atlas, KNApSAcK, MINE and in house library. Designed for searches through experimental masses obtained from mass spectrometry techniques. Metabolite annotation tool that uses expert system to score putative annotation based on analytical information acquired under different configurations.

Proper citation: CEU Mass Mediator (RRID:SCR_022090) Copy   

•   Source: SciCrunch Registry

https://github.com/mourisl/Rcorrector

Software tool as kmer based error correction method for RNAseq data. Can also be applied to other types of sequencing data where read coverage is nonuniform, such as single cell sequencing. Used for error correction for Illumina RNAseq reads.

Proper citation: Rcorrector (RRID:SCR_022011) Copy   

•   Source: SciCrunch Registry

https://www.microbialtec.com/aerobic-cultivation.html

Aerobic cultivation services to culture various microorganisms that can be isolated from readily available sources.

Proper citation: Creative Biogene Aerobic Cultivation Service Resource (RRID:SCR_022099) Copy   

•   Source: SciCrunch Registry

https://www.bcgsc.ca/resources/software/ntcard

Software tool for estimating k-mer coverage histogram of genomics data. Streaming algorithm for estimating frequencies of k-mers in genomics datasets.

Proper citation: ntCard (RRID:SCR_022010) Copy   

•   Source: SciCrunch Registry

https://www.microbialtec.com/strain-anaerobic-culture.html

Service for anaerobic bacteria cultivation and culture using variety of culture media and culture conditions. Includes collection, strain cultivation, isolation, identification and strain preservation.

Proper citation: Creative Biogene Strain Anaerobic Culture Service Resource (RRID:SCR_022097) Copy   

•   Source: SciCrunch Registry