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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Stanford Sarafan Metabolomics Knowledge Center Core Facility Resource Report Resource Website |
Stanford Sarafan Metabolomics Knowledge Center Core Facility (RRID:SCR_023236) | MKC | access service resource, core facility, service resource | Provides scientific expertise and instrumentation for measurement of small molecules such as metabolites and lipids to ChEM-H and Stanford communities. Leverages expertise in mass spectrometry and allied techniques to understand biology of small molecules both metabolites and xenobiotics and to apply that understanding to advances in human health. | USEDit, ABRF, small molecules, metabolites and lipids, expertise and instrumentation, mass spectrometry |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Restricted | ABRF_2473 | https://coremarketplace.org/?FacilityID=2473&citation=1, https://coremarketplace.org/RRID:SCR_023236?citation=1 | SCR_023236 | Metabolomics Knowledge Center | 2026-09-05 06:34:32 | 0 | ||||||
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University of Arizona Analytical and Biological Mass Spectrometry Core Facility Resource Report Resource Website 10+ mentions |
University of Arizona Analytical and Biological Mass Spectrometry Core Facility (RRID:SCR_023370) | ABMS | access service resource, core facility, service resource | Provides equipment and expertise for analysis of variety of biological and small molecules.Services include protein analysis encompassing protein identification, protein and peptide sequence confirmation, intact protein molecular weight determination, complex protein sample analysis, and protein/antibody drug interactions.Developed metabolomics library to support metabolomic and lipidomics analysis. Can identify range of post-translational modifications, determining their presence or absence, as well as quantitating PTMs.Proteomics and small molecule services include workflows for label free,chemical labeling (iTRAQ/TMT) and metabolic labeling (SILAC).Service for molecular synthesis, with monitoring reaction steps,calculating percentage of product, testing for purity, and molecule characterization with high resolution and high mass accuracy.Provides molecular weight and chemical composition determinations, structure elucidations and compound identification analysis or confirmation and accurate mass measurements of synthetic products, measurement of polymers, nucleic acids (DNA/RNA), peptides, proteins, natural products, and assistance with determination of unknowns. | USEDit, ABRF, small molecules, protein identification, protein and peptide sequence confirmation, intact protein molecular weight determination, complex protein sample analysis, protein, antibody, drug interactions, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Arizona; Arizona; USA |
ABRF_1698 | https://coremarketplace.org/?FacilityID=1698&citation=1 | SCR_023370 | UArizona Analytical & Biological Mass Spectrometry Facility, University of Arizona UArizona Analytical & Biological Mass Spectrometry Facility | 2026-09-05 06:34:34 | 10 | |||||||
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Arpege Core Facility Resource Report Resource Website |
Arpege Core Facility (RRID:SCR_023092) | access service resource, core facility, service resource | Offers functional and structural analysis of protein complexes.Offers possibility to characterize all types of molecular interactions: ligand-target binding, protein-protein interactions, signal transduction, and signalling complexes. Staff members are skilled specialists in luminescence-based techniques and in receptor biology.Application portfolio includes Analysis of cell signalling, by measuring signal transduction;Ligand-target binding (pharmacological analysis, affinity, selectivity); Protein-protein interactions (oligomerization, effectors...); Activation of signalling pathways (G proteins, GRK, arrestins & internalization); Intracellular production of second messengers (cAMP, IP1, Ca2+); Phosphorylation of signalling proteins (ERK, AKT...); Measurement of global cell functions and of different cell parameters (proliferation, migration, invasion...). | USEDit, ABRF, functional and structural analysis of protein complexes, |
is listed by: ABRF CoreMarketplace is related to: USEDit |
ABRF_1654 | https://coremarketplace.org/?FacilityID=1654&citation=1 | SCR_023092 | Arpege | 2026-09-05 06:34:31 | 0 | ||||||||
|
Montpellier GenomiX Core Facility Resource Report Resource Website 10+ mentions |
Montpellier GenomiX Core Facility (RRID:SCR_023091) | MGX | access service resource, core facility, service resource | Offers genomic technologies to academic laboratories and biotechnology companies.Application portfolio includes Whole genome (re)sequencing, including the identification of variants (SNVs, mutations, indels, CNVs);Targeted sequencing, for instance exomes; Transcriptome analyses (RNA-Seq, small RNA-Seq, microarrays), including in single cells (single-cell 3 RNA-seq); Determination of chromatin structure and dynamics (ChIP-Seq, FAIRE-Seq, Hi-C); Epigenetic analyses (ChIP-Seq, RRBS, Bisulphite-Seq);Genotyping (RAD-Seq, GBS, microarrays). | USEDit, ABRF, genomic technologies |
is listed by: ABRF CoreMarketplace is related to: USEDit |
Open | ABRF_1653 | https://coremarketplace.org/?FacilityID=1653&citation=1 | SCR_023091 | Montpellier GenomiX | 2026-09-05 06:34:31 | 11 | ||||||
|
Stanford Neuroscience Microscopy Service Core Facility Resource Report Resource Website 1+ mentions |
Stanford Neuroscience Microscopy Service Core Facility (RRID:SCR_023257) | NMS | access service resource, core facility, service resource | Provides microscopy expertise and access to high resolution, state-of-the-art imaging technologies to Stanford University and surrounding academic and biotech researchers. Core provides training, design, implementation, and analysis assistance. | USEDit, ABRF, imaging technologies, microscopy expertise, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Open | ABRF_520 | https://coremarketplace.org/?FacilityID=520&citation=1, https://coremarketplace.org/RRID:SCR_023257?citation=1 | SCR_023257 | Neuroscience Microscopy Service, Stanford Neuroscience Microscopy Service | 2026-09-05 06:34:33 | 1 | ||||||
|
Centre for Genomic Regulation Proteomics Unit Core Facilitiy Resource Report Resource Website |
Centre for Genomic Regulation Proteomics Unit Core Facilitiy (RRID:SCR_023377) | access service resource, core facility, service resource | Proteomics Unit is joint effort of Universitat Pompeu Fabra and Center of Genomic Regulation. Provides proteomics services by offering state-of-the-art methods, advise and expertise to support basic and translational researchers; developing new methods and techniques that keep the unit up to date and at the forefront of the proteomics field; training community and actively disseminating proteomics science and methods.Part of Spanish National Infrastructure for Omics Technologies and European Proteomics Infrastructure Consortium, and it coordinates European innovative and interdisciplinary Research and Training network. The Proteomics Unit is also part of Spanish National Health System. | USEDit, ABRF, proteomics services, |
is listed by: ABRF CoreMarketplace is related to: USEDit |
Open | ABRF_1703 | https://coremarketplace.org/?FacilityID=1703&citation=1 | SCR_023377 | CRG/UPF Proteomics Unit, Centre for Genomic Regulation CRG/UPF Proteomics Unit | 2026-09-05 06:34:34 | 0 | |||||||
|
Stanford Neuroscience Preclinical Imaging Laboratory Core Facility Resource Report Resource Website |
Stanford Neuroscience Preclinical Imaging Laboratory Core Facility (RRID:SCR_023254) | NPIL | access service resource, core facility, service resource | Provides preclinical Magnetic Resonance Imaging technology and expertise to Stanford community. Offers range of support from full project to independent user operation and training. | USEDit, ABRF, preclinical Magnetic Resonance Imaging, MRI |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Open | ABRF_2478 | https://coremarketplace.org/?FacilityID=2478&citation=1, https://coremarketplace.org/RRID:SCR_023254?citation=1 | SCR_023254 | Neuroscience Preclinical Imaging Laboratory, Stanford Neuroscience Preclinical Imaging Laboratory | 2026-09-05 06:34:33 | 0 | ||||||
|
Stanford Geochronology Cluster Core Facility Resource Report Resource Website 1+ mentions |
Stanford Geochronology Cluster Core Facility (RRID:SCR_023252) | GCC | access service resource, core facility, service resource | Core for comprehensive examination of evolution of Earth's crust using geochronologic approaches. Provides spectrum of analytical facilities that are all housed within School of Earth, Energy and Environmental Sciences.Provides data to many disciplines throughout geosciences, including tectonics, geodynamics, petrology, geochemistry, geomorphology, sedimentology, stratigraphy, paleontology, and paleoclimatology. | USEDit, ABRF, evolution of Earth's crust examination, geochronology, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Restricted | ABRF_2480 | https://coremarketplace.org/?FacilityID=2480&citation=1, https://coremarketplace.org/RRID:SCR_023252?citation=1 | SCR_023252 | Geochronology Cluster, Stanford Geochronology Cluster | 2026-09-05 06:34:33 | 1 | ||||||
|
Centre for Genomic Regulation Bioinformatics Unit Core Facility Resource Report Resource Website |
Centre for Genomic Regulation Bioinformatics Unit Core Facility (RRID:SCR_023373) | access service resource, core facility, service resource | Provides services of consultation, planning NGS and other genomic experiments, NGS data processing, analysis and management, software and database development, bioinformatics training, and access to high-performance computing resources at CRG. The Unit works in synergy with the Genomics Unit and the Biomolecular Screening and Protein Technologies Unit to support users using high throughput sequencing technologies from experiment planning to delivery of timely and reliable results. | USEDit, ABRF |
is listed by: ABRF CoreMarketplace is related to: USEDit |
Open | ABRF_1700 | https://coremarketplace.org/?FacilityID=1700&citation=1 | SCR_023373 | Centre for Genomic Regulation Bioinformatics Unit, Bioinformatics Unit | 2026-09-05 06:34:34 | 0 | |||||||
|
Rockefeller University CRISPR and Genome Editing Resource Center Core Facility Resource Report Resource Website |
Rockefeller University CRISPR and Genome Editing Resource Center Core Facility (RRID:SCR_023097) | access service resource, core facility, service resource | Provides gene targeting and mouse embryonic stem cell technology for members of Rockefeller University, Memorial Sloan-Kettering Cancer Center and their collaborators.CRISPR and Genome Editing services include mouse genomic knock-out and knock-in, mouse conditional knock-out, establishing new ES lines for gene targeting services, establishing ES lines from mutant mouse embryos, preparing ES cells introduced from off campus resources for injection or other application, assisting in embryoid body culture and in vitro differentiation of ES cells, and purification and evaluation of DNA for pronuclear injection. | USEDit, ABRF, gene targeting and mouse embryonic stem cell technology, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Rockefeller University; New York; USA |
Restricted | ABRF_428 | https://coremarketplace.org/?FacilityID=428&citation=1 | SCR_023097 | Rockefeller University CRISPR and Genome Editing Resource Center, CRISPR and Genome Editing Resource Center | 2026-09-05 06:34:32 | 0 | |||||||
|
Centre for Genomic Regulation Advanced Light Microscopy Unit Core Facility Resource Report Resource Website |
Centre for Genomic Regulation Advanced Light Microscopy Unit Core Facility (RRID:SCR_023371) | ALMU | access service resource, core facility, service resource | Core provides support with experimental design, sample preparation, acquisition, bioimage analysis and visualization.Consists of microscope systems specifically designed for fluorescence microscopy ranging from confocal, widefield to super resolution systems and helps reveal structures from macro to nanoscale. | USEDit, ABRF, Advanced Light Microscopy, bioimage |
is listed by: ABRF CoreMarketplace is related to: USEDit |
Open | ABRF_1699 | https://coremarketplace.org/?FacilityID=1699&citation=1 | SCR_023371 | Advanced Light Microscopy Unit (ALMU), Advanced Light Microscopy Unit | 2026-09-05 06:34:34 | 0 | ||||||
|
Stanford Behavioral and Functional Neuroscience Laboratory Core Facility Resource Report Resource Website 1+ mentions |
Stanford Behavioral and Functional Neuroscience Laboratory Core Facility (RRID:SCR_023249) | BFNL | access service resource, core facility, service resource | Laboratory at Wu Tsai Neursciences Institute provides preclinical discovery platform for central nervous system target validation in preclinical in vivo and in vitro models. Neurobehavioral assessment tools in CNS disease models provide platform for screening and profiling of experimental therapeutics and genetic rodent models. Used to support understanding of human CNS disorders and development of therapeutic interventions. | USEDit, ABRF, neurobehavioral assessment, therapeutic interventions, CNS disease models, human CNS disorders, central nervous system, target validation, preclinical discovery |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
ABRF_2476 | https://coremarketplace.org/?FacilityID=2476&citation=1, https://coremarketplace.org/RRID:SCR_023249?citation=1 | SCR_023249 | Behavioral and Functional Neuroscience Laboratory (BFNL), Stanford Behavioral and Functional Neuroscience Laboratory (BFNL) | 2026-09-05 06:34:33 | 2 | |||||||
|
Protofilament Bending Models Resource Report Resource Website 1+ mentions |
Protofilament Bending Models (RRID:SCR_023062) | software resource, source code | Code is written to be run with Matlab version r2020b or higher. Model accepts wave assay pulse amplitude data, and simultaneously solves and fits protofilament deflection models to deduce fundamental biophysical properties of microtubule protofilaments. | Matlab, protofilament, microtubule, strain energy, GTP hydrolysis | uses: MATLAB | NIGMS R35GM134842 | DOI:10.7554/eLife.83225 | Free, Available for download, Freely available | SCR_023062 | 2026-09-05 06:34:31 | 1 | ||||||||
|
Stanford University School of Medicine Center for Innovation in In vivo Imaging Core Facility Resource Report Resource Website |
Stanford University School of Medicine Center for Innovation in In vivo Imaging Core Facility (RRID:SCR_023345) | SCi3 | access service resource, core facility, service resource | Small animal imaginig service center.Instruments range from systems typically found in clinical setting, but scaled for rodent usage (such as MRI, PET, CT and ultrasound), optical systems for measuring bioluminescence, fluorescence, and Cherenkov light (IVIS, Ami, Lago and Maestro systems), new modalities (MPI and photoacoustic), as well as access to advanced image analysis software, computer workstations, and surgical preparation areas. Scientists are trained to use instruments independently and can schedule studies as needed. | USEDit, ABRF, small animal imaginig, bioluminescence, fluorescence, Cherenkov light, image analysis |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
ABRF_2493 | https://coremarketplace.org/?FacilityID=2493&citation=1, https://coremarketplace.org/RRID:SCR_023345?citation=1 | SCR_023345 | Stanford Center for Innovation in In vivo Imaging (SCi3) | 2026-09-05 06:34:34 | 0 | |||||||
|
abSENSE Resource Report Resource Website 1+ mentions |
abSENSE (RRID:SCR_023223) | software resource, source code | Software to interpret undetected homolog.Method that calculates probability that homolog of given gene would fail to be detected by homology search in given species, even if homolog were present and evolving normally. | undetected homolog, gene homolog detection failure, homology search, lineage-specific genes, homology detection failure | Harvard University ; Howard Hughes Medical Institute ; NHGRI R01-HG009116; NIGMS RO1-GM43987; NSF 1764269; Simons Center for the Mathematical and Statistical Analysis of Biology 594596 |
PMID:33137085 | Free, Available for download, Freely available | http://www.eddylab.org/abSENSE/ | SCR_023223 | 2026-09-05 06:34:32 | 1 | ||||||||
|
Stanford University School of Medicine Richard M. Lucas Center for Imaging Core Facility Resource Report Resource Website |
Stanford University School of Medicine Richard M. Lucas Center for Imaging Core Facility (RRID:SCR_023344) | access service resource, core facility, service resource | Houses four whole-body MRI systems (three 3.0T, one 7.0T). 3T2 and 3T3 are part of the Lucas Service Center. Individual researchers are trained in magnet safety and scanner operations by the magnet manager or MR research technologists. | USEDit, ABRF, whole-body MRI systems, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Open | ABRF_2491 | https://coremarketplace.org/?FacilityID=2491&citation=1, https://coremarketplace.org/RRID:SCR_023344?citation=1 | SCR_023344 | Stanford Lucas MRI Service Center Richard M. Lucas Center for Imaging | 2026-09-05 06:34:34 | 0 | |||||||
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Stanford University School of Medicine In Vitro Biosafety Level3 Service Center Core Facility Resource Report Resource Website |
Stanford University School of Medicine In Vitro Biosafety Level3 Service Center Core Facility (RRID:SCR_023342) | BSL3 | access service resource, core facility, service resource | Center consists of Virology BSL3 lab, separate BSL3 Bacteriology lab, and BSL2 lab. It is operated by School of Medicine as scientific service center and is open to all Stanford researchers after adequate training and subsequent use. | USEDit, ABRF, Virology BSL3, BSL3 Bacteriology lab, BSL2 lab, |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Stanford University; Stanford; California |
Restricted | ABRF_2489 | https://coremarketplace.org/?FacilityID=2489&citation=1, https://coremarketplace.org/RRID:SCR_023342?citation=1 | SCR_023342 | In Vitro Biosafety Level-3 Service Center | 2026-09-05 06:34:33 | 0 | ||||||
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IZSLER Biobank Resource Report Resource Website 1+ mentions |
IZSLER Biobank (RRID:SCR_023185) | IZSLER | biobank, material storage repository, service resource, storage service resource | Provides maintaining and managing the largest veterinary biobank facility in Italy for the storage of biological resources. IZSLER Biobank of Veterinary Resources include mainly bacteria and viruses from different animal species isolated during the routine IZSLER diagnostic activity, carried out on biological samples from farm animals, pets and wildlife and from food and feed. Biobank includes more than 600 cell lines from human and animal origin. All the materials enrolled in our collection are submitted to different cultural and molecular biology control tests in order to evaluate their characteristics, purity and identity. IZSLER laboratories, that supply biological resources to IBVR, use testing methods performed according to UNI EN ISO/IEC 17025 quality system. | works with: Cellosaurus | https://www.izsler.it/ | SCR_023185 | IZSLER Biobank of Veterinary Resources, IZLER Biobank, Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna Biobank | 2026-09-05 06:34:32 | 1 | |||||||||
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Tohoku University Cell Resource Center for Biomedical Research Cell Bank Resource Report Resource Website |
Tohoku University Cell Resource Center for Biomedical Research Cell Bank (RRID:SCR_023192) | TKG | biobank, material storage repository, service resource, storage service resource | Cell Resource Center for Biomedical Research, Cell Bank is the collection, establishment, quality control, distribution of useful cell lines, and construction of database for researchers. The cell lines include transplantable animal cell lines, such as Yoshida sarcoma and rat ascites hepatoma (AH series) cell lines as well as human, murine cell lines and hybridoma cells. Available cell line are listed in The Cell Line Catalog. | works with: Cellosaurus | SCR_023192 | Tohoku University Cell Bank | 2026-09-05 06:34:32 | 0 | ||||||||||
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Carnegie Mellon University Pitt Brain Imaging Data Generation and Education Center Core Facility Resource Report Resource Website 10+ mentions |
Carnegie Mellon University Pitt Brain Imaging Data Generation and Education Center Core Facility (RRID:SCR_023356) | access service resource, core facility, service resource | Collaborative MRI facility that is jointly operated by the University of Pittsburgh and Carnegie Mellon University. Research neuroimaging facility, with focus on advanced data analytics and basic science research. Designed to support basic science research and next generation of brain scientists. | USEDit, ABRF, neuroimaging, advanced data analytics |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: Carnegie Mellon University; Pennsylvania; USA has parent organization: University of Pittsburgh; Pennsylvania; USA |
ABRF_1696 | https://coremarketplace.org/?FacilityID=1696&citation=1 | SCR_023356 | CMU-Pitt BRIDGE Center, Carnegie Mellon University CMU-Pitt BRIDGE Center | 2026-09-05 06:34:34 | 22 |
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