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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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MetaPhyl Resource Report Resource Website |
MetaPhyl (RRID:SCR_001169) | MetaPhyl | software resource | Software implementing a supervised classification method for metagenomic samples that takes advantage of the natural structure of microbial community data encoded by phylogenetic trees. | c++, linux, mac osx, phylogenetic tree, command line, classification, metagenomic |
is listed by: OMICtools has parent organization: University of California at Riverside; California; USA |
PMID:24369151 | Free, Available for download, Freely available | OMICS_02189 | SCR_001169 | 2026-09-12 12:55:20 | 0 | |||||||
|
Ottawa Hospital Research Institute Labs and Facilities Resource Report Resource Website |
Ottawa Hospital Research Institute Labs and Facilities (RRID:SCR_001045) | OHRI Labs and Facilities, OHRI Labs & Facilities | access service resource, core facility, data or information resource, portal, service resource | Portal to research facilities and services within the Ottawa Hospital Research Institute. Facilities and services include access to their bioinformatics facility, flow cytometry facility, human pluripotent stem cell facility, and their clinical research lab. | genomics, proteomics, biotechnology, bioinformatics, human health, ottawa, research service |
is listed by: ScienceExchange has parent organization: University of Ottawa; Ontario; Canada |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_4969 | http://www.scienceexchange.com/facilities/4969 | SCR_001045 | , Research Institute Labs, Ottawa Hospital, Facilities, OHRI | 2026-09-12 12:55:18 | 0 | ||||||
|
icyou Health Videos Resource Report Resource Website |
icyou Health Videos (RRID:SCR_001167) | data or information resource, portal, topical portal, video resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on August 18, 2016. icyou is an internet resource of health-related video clips submitted by users. Health topics covered in videos can range anywhere from infectious diseases to fitness and exercise, with videos generally being shorter than 10 minutes in length. Videos also contain information on treatment and procedures, medical fields, and health politics and policy. These videos may or may not be authored by licensed medical personnel. All videos are searchable, and users can also choose to upload their own healthcare-related videos. In addition to gathering healthcare video from the best sources on the Web and beyond, icyou.com can call on its own award-winning health reporting team to cover the latest issues and trends. Through its parent company Benefitfocus, icyou.com has full access to the Benefitfocus Media Studio, a state-of-the-art HD facility located in Charleston, South Carolina. This studio is the only one of its kind devoted solely to creating healthcare-oriented video content. In it, the Benefitfocus Media team creates up-to-the-minute reports, tutorials, features and more that help illuminate its users about the complexities of the many facets of healthcare. | exercise, fitness, healthcare, health policy, health politics, health topic, medical fields, medical procedure, treatment | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-11652 | http://www.icyou.com | SCR_001167 | icyou | 2026-09-12 12:55:20 | 0 | ||||||||
|
Transposon Insertion Finder Resource Report Resource Website 1+ mentions |
Transposon Insertion Finder (RRID:SCR_001159) | TIF | software resource | A search program to detect insertions of transposable element from short reads of next generation sequencer. | perl, unix/linux | is listed by: OMICtools | PMID:24629057 | Free, Available for download, Freely available | OMICS_03508 | SCR_001159 | Transposon Insertion Finder | 2026-09-12 12:55:20 | 1 | ||||||
|
Medical College of Wisconsin; Wisconsin; USA Resource Report Resource Website |
Medical College of Wisconsin; Wisconsin; USA (RRID:SCR_001077) | MCW | university | Private and freestanding medical school and graduate school of sciences in Milwaukee, Wisconsin. The institution offers medical degrees as well as masters and PhD-level studies in areas such as biochemistry, cell biology, and community and public health. | private, freestanding, medical, graduate, masters, phd, public health, university |
is related to: Clinical and Translational Science Awards Consortium is parent organization of: Clinical Measurement Ontology is parent organization of: Experimental Conditions Ontology is parent organization of: RatMine is parent organization of: Rat Genome Database (RGD) is parent organization of: Medical College of Wisconsin Cell Biology Neurobiology and Anatomy is parent organization of: National Biomedical Electron Paramagnetic Resonance Center is parent organization of: Cytopathology Foundation is parent organization of: Rat Genome Database: Neurological Disease Portal is parent organization of: Flash Gviewer is parent organization of: Medical College of Wisconsin Mellowes Center for Genomic Sciences and Precision Medicine Core Facility is parent organization of: Medical College of Wisconsin Oxford Instruments Center for Advanced Microscopy Electron Microscopy Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Geospatial, Epidemiology and Outcomes Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Echo Core Shared High-Frequency Ultrasound Imaging Core Facility is parent organization of: Medical College of Wisconsin Tissue Bank is parent organization of: Medical College of Wisconsin Translational Metabolomics Shared Resource Mass Spectrometry Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Structural Biology Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Translational Metabolomics Shared Resource, Redox and Bioenergetics Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Cell Therapy Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Children’s Research Institute CRI Imaging Core Facility is parent organization of: Medical College of Wisconsin Neuroscience Research Center NRC Microscopy Core Facility is parent organization of: Medical College of Wisconsin Comprehensive Rodent Metabolic Phenotyping Core Facility is parent organization of: Medical College of Wisconsin Children's Research Institute Histology Core Facility is parent organization of: Medical College of Wisconsin MCW Engineering Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Stem Cell and Organoid Core Facility is parent organization of: Medical College of Wisconsin Cancer Center Biostatistics Shared Resource Core Facility is parent organization of: Medical College of Wisconsin Children's Research Institute Flow Cytometry Core Facility is parent organization of: Medical College of Wisconsin Center for Microbiome Research Core Facility is parent organization of: Medical College of Wisconsin Cardiovascular Research Center CVRC Microscopy Core Facility is parent organization of: Medical College of Wisconsin Center for Imaging Research Core Facility |
, GRID grid.30760.32, ISNI 0000 0001 2111 8460, nlx_30873, Crossref Funder ID 100008980, Wikidata Q6806307 | https://ror.org/00qqv6244 | SCR_001077 | Medical College of Wisconsin | 2026-09-12 12:55:18 | 0 | |||||||
|
North Dakota State University; North Dakota; USA Resource Report Resource Website 1+ mentions |
North Dakota State University; North Dakota; USA (RRID:SCR_001110) | NDSU | university | Public research university in North Dakota, USA. It is a land-grant university that focuses on agriculture and the applied sciences. In addition, it offers undergraduate and graduate degrees in a wide variety of areas including engineering, science and mathematics, health professions, business, and agriculture and food systems studies. | public, research, land grant, agriculture, applied sciences, food systems, health profession |
is parent organization of: NDSU Center for Protease Research is parent organization of: North Dakota State University Labs and Facilities is parent organization of: North Dakota State University School of Pharmacy; North Dakota; USA |
Wikidata:Q2000624, grid.261055.5, nlx_71768, ISNI:0000 0001 2293 4611, Crossref funder ID:100007518 | https://ror.org/05h1bnb22 | SCR_001110 | North Dakota State University | 2026-09-12 12:55:19 | 1 | |||||||
|
University of Oklahoma; Oklahoma; USA Resource Report Resource Website 1+ mentions |
University of Oklahoma; Oklahoma; USA (RRID:SCR_001074) | OU | university | A coeducational public research university located in Oklahoma, USA. The institution confers undergraduate and graduate degrees in fields such as law, medicine, aviation, energy management, history of science, and Native American studies. | public, research, university, undergraduate, graduate |
is parent organization of: Development of a Specific-Pathogen-Free Baboon Colony is parent organization of: University of Oklahoma College of Medicine; Oklahoma; USA is parent organization of: Amblyomma Americanum (Lone Star Tick) cDNA Sequencing is parent organization of: Baboon Research Resouces is parent organization of: Cryptococcus Neoformans cDNA Sequencing is parent organization of: University of Oklahoma Labs and Facilities is parent organization of: University of Oklahoma Health Sciences Center Laboratory for Molecular Biology and Cytometry Research Core Facility is parent organization of: University of Oklahoma Samuel Roberts Nobel Microscopy Laboratory Core Facility is parent organization of: University of Oklahoma Health Sciences Center OK INBRE Data Science Core Facility is parent organization of: University of Oklahoma Protein Production and Characterization Core Facility is parent organization of: University of Oklahoma Biomolecular Structure Core Facility is parent organization of: University of Oklahoma Health Sciences Center Tissue Pathology and Biospecimen Core Facility is parent organization of: University of Oklahoma College of Medicine Immunology and Informatics Core Facility is parent organization of: University of Oklahoma Health Sciences Center Ocular Immunobiology Core Facility is parent organization of: University of Oklahoma Health Sciences Live Animal Imaging and Analysis Core Facility is parent organization of: University of Oklahoma Health Sciences Center Cellular Imaging and Morphometric Analysis Core Facility |
nlx_27458, grid.266900.b, Wikidata:Q640652, ISNI:0000 0004 0447 0018, Crossref funder ID:100007926 | https://ror.org/02aqsxs83 | SCR_001074 | University of Oklahoma | 2026-09-12 12:55:18 | 1 | |||||||
|
University of Adelaide; Adelaide; Australia Resource Report Resource Website 1+ mentions |
University of Adelaide; Adelaide; Australia (RRID:SCR_001075) | university | Public research university in Adelaide, South Australia. It is known for its focus on research and emphasis on moving towards commercialization of research. | public, research, university, adelaide, australia, research, commercialization |
is parent organization of: Neural Network Resources is parent organization of: Centre for Automotive Safety Research |
Wikidata:Q15574, nlx_73637, ISNI:0000 0004 1936 7304, Crossref funder ID:501100001786, grid.1010.0 | https://ror.org/00892tw58 | SCR_001075 | 2026-09-12 12:55:18 | 2 | |||||||||
|
Speech Perception Resource Report Resource Website |
Speech Perception (RRID:SCR_001114) | data or information resource, portal, topical portal | An entry of the Cognitive Atlas which defines the term speech perception. | cognitive science, language, processing language | is related to: Cognitive Atlas | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_145380 | SCR_001114 | 2026-09-12 12:55:19 | 0 | |||||||||
|
Athens Research and Technology Resource Report Resource Website 1+ mentions |
Athens Research and Technology (RRID:SCR_001079) | commercial organization | Commercial supplier of bioproducts for studies of inflammation, autoimmune disease, cancer, coronary disease, Alzheimer's Disease and more. These include antibodies, enzymes, coagulation factors, and assay kits. | antibody, protein, biotherapeutics, autoimmune disease, cancer, coronary disease, alzheimers disease | inflammation, autoimmune disease, cancer, coronary disease, Alzheimer's Disease | Wikidata: Q30284050, nlx_152285, grid.423006.3 | https://ror.org/0527dhk70 | SCR_001079 | Athens Research and Technology Inc. | 2026-09-12 12:55:19 | 1 | ||||||||
|
bsseq Resource Report Resource Website 1+ mentions |
bsseq (RRID:SCR_001072) | data analysis software, data processing software, sequence analysis software, software application, software resource | R package with tools for analyzing and visualizing bisulfite sequencing data. | bisulfite sequencing, analyze, r, sequence analysis software, data analysis software, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: Bioconductor |
Free, Available for download, Freely available | OMICS_01847, biotools:bsseq | https://bio.tools/bsseq | SCR_001072 | bsseq - Analyze manage and store bisulfite sequencing data | 2026-09-12 12:55:18 | 8 | |||||||
|
MmPalateMiRNA Resource Report Resource Website 1+ mentions |
MmPalateMiRNA (RRID:SCR_001070) | data analysis software, data processing software, software application, software resource, source code | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. Software R package written for analysis of murine palate miRNA two-color expression data. | murine, palate, mirna, two color expression, open source, r |
is listed by: OMICtools is hosted by: Bioconductor |
PMID:23298515 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00788 | SCR_001070 | 2026-09-12 12:55:18 | 1 | ||||||||
|
R453Plus1Toolbox Resource Report Resource Website 1+ mentions |
R453Plus1Toolbox (RRID:SCR_001105) | data analysis software, data processing software, sequence analysis software, software application, software resource, software toolkit | R software toolbox of functions for the analysis of data generated by Roche's 454 sequencing platform. Additional functions are included for quality assurance, annotation and visualization of detected variants, complementing the software tools shipped by Roche with their product. A pipeline for the detection of structural variants is provided. | genome, sequence, visualization, structural variants, r, sequence analysis software |
is listed by: OMICtools is hosted by: Bioconductor |
PMID:21349869 | Free, Available for download, Freely available | OMICS_01354 | SCR_001105 | 2026-09-12 12:55:19 | 4 | ||||||||
|
Academy Biomedical Company Resource Report Resource Website |
Academy Biomedical Company (RRID:SCR_001108) | commercial organization | Commercial antibody supply company that focuses on providing antibodies for research in cardiovascular and atherosclerosis. | antibody, cardiovascular, athersclerosis, antibody supplier | nlx_152249 | SCR_001108 | Academy Bio-Medical Company, Academy Biomedical Company Inc. | 2026-09-12 12:55:19 | 0 | ||||||||||
|
RmiR Resource Report Resource Website |
RmiR (RRID:SCR_001069) | RmiR | data analysis software, data processing software, sequence analysis software, software application, software resource | R package that contains functions to merge microRNA and respective targets using different databases. | micro rna, mrna, function, target, r, sequence analysis software |
is listed by: OMICtools has parent organization: Bioconductor |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00789 | https://rdrr.io/bioc/RmiR/ | SCR_001069 | 2026-09-12 12:55:18 | 0 | |||||||
|
BreakFusion Resource Report Resource Website 1+ mentions |
BreakFusion (RRID:SCR_001102) | BreakFusion | software resource | Software package written in Perl and C++ that provides a computational pipeline for identifying gene fusions from RNA-seq data. | computational pipeline, gene fusions, rna, sequence, data, perl, c++ |
is listed by: OMICtools has parent organization: University of Texas MD Anderson Cancer Center |
PMID:22563071 DOI:10.1093/bioinformatics/bts272 |
Free, Available for download, Freely available | OMICS_01342 | SCR_001102 | 2026-09-12 12:55:19 | 3 | |||||||
|
Virginia Commonwealth University School of Medicine; Virginia; USA Resource Report Resource Website |
Virginia Commonwealth University School of Medicine; Virginia; USA (RRID:SCR_001061) | VCU SOM | university | Medical school division of Virginia Commonwealth University. | virginia, medical, medicine, commonwealth, medical school, continuing medical education, residency | has parent organization: Virginia Commonwealth University; Virginia; USA | nlx_64661 | SCR_001061 | VCU School of Medicine | 2026-09-12 12:55:18 | 0 | ||||||||
|
U.S. Department of Education Resource Report Resource Website 1+ mentions |
U.S. Department of Education (RRID:SCR_001060) | ED | institution | The United States federal government Department of Education, which oversees policies on federal financial aid for education, collecting data and disseminating research, and working to promote key educational discussions and equal access to education. | education, federal, financial aid, fafsa, government department | is parent organization of: National Institute on Disability and Rehabilitation Research | Available to groups within the United States of America | grid.419881.d, Crossref funder ID: 100000138, Wikidata: Q861556, ISNI: 0000 0001 2176 2483, nlx_143871 | https://ror.org/021adze67 | SCR_001060 | ED.gov, United States Department of Education | 2026-09-12 12:55:18 | 2 | ||||||
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NPEBseq Resource Report Resource Website 1+ mentions |
NPEBseq (RRID:SCR_001014) | NPEBseq | software resource | A method for non-parametric, empirical Bayesian-based analysis of RNA-seq count data. | rna, rna sequence, seq, empirical, Bayesian, nonparametric | is listed by: OMICtools | PMID:23981227 | OMICS_01312 | http://bioinformatics.wistar.upenn.edu/NPEBseq | SCR_001014 | 2026-09-12 12:55:18 | 1 | |||||||
|
SplitSeek Resource Report Resource Website 1+ mentions |
SplitSeek (RRID:SCR_001012) | data analysis software, data processing software, sequence analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented September 20, 2016. A program for de novo prediction of splice junctions in RNA-seq data. | bioinformatics alignment, sequence analysis software, de novo, prediction, rna seq, rna, splice junction, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian |
PMID:20236510 | THIS RESOURCE IS NO LONGER IN SERVICE | biotools:splitseek, OMICS_01253 | https://bio.tools/splitseek | http://www.uppmax.uu.se/software/splitseek | SCR_001012 | 2026-09-12 12:55:17 | 1 |
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