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https://andor.oxinst.com/downloads/uploads/Andor_Luca-S_Manual.pdf

Luca-S camera of single photon sensitive imaging Andor family scientific cameras with Electron Multiplying Charge Coupled Device detector, designed for most challenging low-light imaging applications.

Proper citation: Andor: Luca S EMCCD camera (RRID:SCR_023165) Copy   

•   Source: SciCrunch Registry

https://www.heka.com/downloads/hardware/manual/m_itc18.pdf

Second generation low noise 16 bit computer interface from Instrutech Corporation. 16-bit Multi-Channel Data Acquisition Interface with PCI or USB host adapter.

Proper citation: Heka Elektronik: InstruTECH ITC-18 (RRID:SCR_023164) Copy   

•   Source: SciCrunch Registry

http://www.humanmotorthalamus.com/

A research tool for clinical and experimental neuroscience, which provides images of human thalamus in the stereotactic planes of the coordinate system based on intercommissural line. Images include histological sagittal sections, sagittal maps, coronal maps, horizontal maps, and MRI images all from the same brain. The website also provides materials and methods section, references to the articles and presentations describing research data (on which the maps are based), and a bibliography on the synaptic relationships of subcortical and cortical afferents with projection and local circuit neurons in the motor thalamus.

Proper citation: Human Thalamus in 3D Stereotactic Coordinates (RRID:SCR_014214) Copy   

•   Source: SciCrunch Registry

https://cells.ucsc.edu/

Web based tool to visualize gene expression and metadata annotation distribution throughout single cell dataset or multiple datasets. Interactive viewer for single cell expression. You can click on and hover over cells to get meta information, search for genes to color on and click clusters to show cluster specific marker genes.

Proper citation: UCSC Cell Browser (RRID:SCR_023293) Copy   

•   Source: SciCrunch Registry

https://mskkp.org/

Portal enables browsing, searching, and analysis of human genetic and genomic information linked to musculoskeletal traits and diseases, while protecting the integrity and confidentiality of underlying data.

Proper citation: Musculoskeletal Knowledge Portal (RRID:SCR_023171) Copy   

•   Source: SciCrunch Registry

https://case.edu/medicine/pharmacology/

Department of Pharmacology research mission is to discover specific mechanisms that control physiological processes at cellular and molecular levels. Department offers broad range of educational opportunities ranging from undergraduate research to classes leading toward Ph.D. and M.D.Training Programs include MOLECULAR THERAPEUTICS TRAINING PROGRAM, BIOMEDICAL SCIENCES TRAINING PROGRAM, MEDICAL SCIENTIST TRAINING PROGRAM, SUMMER UNDERGRADUATE RESEARCH PROGRAM, Cancer Pharmacology Training Program.

Proper citation: Case Western Reserve University School of Medicine Department of Pharmacology (RRID:SCR_007220) Copy   

•   Source: SciCrunch Registry

https://github.com/CompSynBioLab-KoreaUniv/FunGAP

Software tool to predict protein coding genes in fungal genome assembly. Performs gene prediction on given genome assembly and RNA-seq reads. Runs multiple gene predictors, evaluates all predicted genes, and assembles gene models that are highly supported by homology to known sequences.

Proper citation: FunGAP (RRID:SCR_023213) Copy   

•   Source: SciCrunch Registry

https://github.com/eirikhoye/airr_tools

Github repository for the paper "T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases" by Høye et al.

Proper citation: airr_tools (RRID:SCR_023297) Copy   

•   Source: SciCrunch Registry

https://github.com/sapporo-wes/yevis-web

Web application for browsing Yevis workflow registry.

Proper citation: Yevis web (RRID:SCR_023205) Copy   

•   Source: SciCrunch Registry

http://cell-innovation.nig.ac.jp/maser/AllPipelines/P000001138_en.html

Software pipeline that visualizes mapping results (in BAM format) on Genome Explorer.

Proper citation: loadBAM2ge_db (RRID:SCR_015951) Copy   

•   Source: SciCrunch Registry

http://gbio-pbil.ibcp.fr/tools/curves_plus/

Web server for analyzing and visualizing helical, backbone and groove parameters of nucleic acid structures. Can also be used to analyse molecular dynamics trajectories., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: CURVES plus (RRID:SCR_023268) Copy   

•   Source: SciCrunch Registry

https://www.sartorius.com/en/products/protein-analysis/octet-bli-detection/octet-systems-software

Octet BLI systems enable real-time, label-free analysis for determination of kinetics, affinity and antibody/protein quantitation. Includes Octet Analysis Studio for analysis of assays measuring kinetics and affinity values for drug-target binding and high-throughput kinetic screening for lead identification. Typical applications include kinetic analysis of protein-protein, protein-small molecules, antibody-antigen, antibody-VLP, antibody-Fc gamma receptors, including antibody-neonatal receptor (FcRn) interactions. Additional applications supported include lot release and stability analysis of drug molecules based on binding kinetics and affinity.

Proper citation: Thermo Fisher: Sartorius: Octet BLI systems (RRID:SCR_023267) Copy   

•   Source: SciCrunch Registry

https://www.enroll-hd.org

Clinical research platform and longitudinal observational study for Huntington’s Disease families intended to accelerate progress towards therapeutics. Collaboration between Huntington’s disease families, clinicians, and researchers to accelerate progress toward effective treatments.

Proper citation: Enroll-HD (RRID:SCR_023300) Copy   

•   Source: SciCrunch Registry

https://www.eppendorf.com/gb-en/eShop-Products/PCR/Thermocyclers/Mastercycler-nexus-p-PF-14698

Thermal cycler conduct PCR runs with range of standard vessel types, from 0.2 mL tubes to 96 well plates using single 96-well aluminum block. Can accommodate 96-well PCR plates, 0.2 mL PCR tubes, 0.2 mL PCR tube strips, and 0.5 mL PCR tubes.Mastercycler nexus cycler can email you when PCR run is complete.

Proper citation: Eppendorf: Mastercycler nexus PCR Thermal Cycler (RRID:SCR_023266) Copy   

•   Source: SciCrunch Registry

https://github.com/pirovc/grimer

Software tool to perform analysis of microbiome studies and generates portable and interactive dashboard integrating annotation, taxonomy and metadata with focus on contamination detection.

Proper citation: GRIMER (RRID:SCR_023265) Copy   

•   Source: SciCrunch Registry

http://www.polardata.ca

Repository of metadata and data that describes and provides access to diverse data sets generated by Arctic and Antarctic researchers.Metadata records follow ISO 19115 and Federal Geographic Data Committee standard formats to provide exchange with other data centres.Records cover wide range of disciplines from natural sciences and policy, to health and social sciences. The PDC Geospatial Search tool is available to the public and researchers alike and allows searching data using mapping interface and other parameters.

Proper citation: Canadian Polar Data Network (RRID:SCR_023143) Copy   

•   Source: SciCrunch Registry

https://bolin.su.se/data/

Provides open access to Climate and Earth System Data from scientists at the centre and their collaborators. Helps to make your data open, FAIR and visually appealing. Each dataset and source code in the Bolin Centre Database is assigned a unique DOI. This makes it easy to cite and find your data. If dataset has more than one version, each version will have its own DOI.

Proper citation: Bolin Centre Database (RRID:SCR_023142) Copy   

•   Source: SciCrunch Registry

https://www.braincommons.org/

Scalable cloud-based platform for computational discovery designed for the brain health community.The BRAINCommons empowers the global research community by providing access to multi-model data, state-of-the-art tools and a secure interoperable system for data sharing.

Proper citation: BRAIN Commons (RRID:SCR_023140) Copy   

•   Source: SciCrunch Registry

https://researchdata.bbk.ac.uk

Repository allows all researchers at Birkbeck to upload data, and get DOI.Data in the Birkbeck Data Repository is stored on Arkivum server.This is a very secure storage space, which will allow our data to remain unchanged and accessible for many years after it is deposited.

Proper citation: Birkbeck Research Data (RRID:SCR_023139) Copy   

•   Source: SciCrunch Registry

https://dmportal.biodata.pt/

Portuguese distributed infrastructure for biological data and Portuguese node of ELIXIR.

Proper citation: BioData Management Portal (RRID:SCR_023138) Copy   

•   Source: SciCrunch Registry