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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://www.diagnostics.us.tosohbioscience.com/analyzers/aia-900
AIA immunoassay analyzer offers automation for immunoassay testing with flexible expansion capabilities. AIA-900 features: 90 tests/hour throughput; Load 10 racks on board; Load up to 5 tests/patient; First result in 18 minutes; Random access; Continuous processing; Simple touch screen operation; Bar coded primary tube sampling; Clot detection; Unit Dose Test Cup; Automated pretreatment; Automated dilution from 2 to 1000.
Proper citation: Tosoh: AIA-900 Automated Immunoassay Analyzer (RRID:SCR_024473) Copy
https://harperlab.connect.hms.harvard.edu/CARGO_Cellular_Autophagy_Regulation_GOlgiphagy/
Web browser for analysis of proteomic data. ShinyApp interface generated in R and RStudio.
Proper citation: CARGO (RRID:SCR_024474) Copy
https://www.planetmicrobe.org/
Web based platform that enables data discovery from curated historical and on going oceanographic sequencing efforts. Enables discovery and integration of oceanographic ‘omics, environmental and physiochemical data layers. Used to centralize and standardize contextual data associated with major marine 'omic datasets. Used for marine microbiology to discover and analyze interconnected 'omics and environmental data.
Proper citation: Planet Microbe (RRID:SCR_024478) Copy
Business Services and Biotechnology Research company in Odense, Denmark.
Proper citation: Evosep (RRID:SCR_024590) Copy
Platform for researchers to economically create and manage digital health programs. Platform built for research management and digital interventions. Helps researchers collect data and engage participants.
Proper citation: Pattern Health Digital Research Platform (RRID:SCR_024468) Copy
https://www.waters.com/nextgen/us/en.html
Publicly traded analytical laboratory instrument and software company headquartered in Milford, Massachusetts. Leading provider of lab equipment, supplies and software. Has pioneered chromatography, mass spectrometry, and thermal analysis innovations.
Proper citation: Waters (RRID:SCR_024589) Copy
https://www.malvernpanalytical.com/en/products/product-range/omnisec/accessories/omnisec-software
Software for OMNISEC instrument control, data acquisition, analysis and reporting. Used for advanced analysis of proteins and polymers by GPC/SEC, and is specifically designed for control of OMNISEC RESOLVE and OMNISEC REVEAL.
Proper citation: OMNISEC (RRID:SCR_024485) Copy
http://pbil.univ-lyon1.fr/software/phyldog/
Software tool to simultaneously build gene and species trees when gene families have undergone duplications and losses. Can analyze thousands of gene families in dozens of genomes simultaneously.
Proper citation: PHYLDOG (RRID:SCR_024487) Copy
https://github.com/chaoszhang/A-pro
Software tool for species tree reconstruction from multi-copy gene family trees.Used for estimating unrooted species tree given set of unrooted gene trees and is statistically consistent under the multi-species coalescent model. ASTRAL-pro extends ASTRAL to allow multi-copy genes. ASTRAL-Pro 2, ultrafast and memory efficient version of ASTRAL-Pro that adopts placement based optimization algorithm for significantly better scalability without sacrificing accuracy.
Proper citation: ASTRAL-Pro (RRID:SCR_024520) Copy
Web based survival analysis tool tailored for medical research. Used to assess correlation between expression of all genes (mRNA, miRNA, protein) and survival in samples from tumor types including breast, ovarian, lung, gastric, colon cancer, AML, and myeloma.
Proper citation: Kaplan Meier Plotter (RRID:SCR_024521) Copy
Software tool for image acquisition.Supports ProgRes microscope cameras and delivers optimal image quality and reproducible results.Included with all of Jenoptik ProgRes microscope cameras.
Proper citation: ProgRes Capture Pro (RRID:SCR_024489) Copy
Web server as ultra fast approach for large scale protein structure similarity searching.The upload protein structure file should be in PDB format. Used for searching similar protein structures by aligning input structure with the whole PDB library.
Proper citation: MADOKA (RRID:SCR_024522) Copy
https://www.bioinformatics.nl/cgi-bin/emboss/getorf
Web application to find and extract open reading frames (ORFs). Used to find and output sequences of open reading frames in one or more nucleotide sequences.
Proper citation: getorf (RRID:SCR_024691) Copy
https://www.noldus.com/erasmusladder
System consists of hardware and software for assessment of motor performance and motor learning in mice. Hardware includes two goal boxes with horizontal ladder in between. Touch sensitive rungs of the ladder make it possible to measure step durations and step types. ErasmusLadder software controls experiments by sending protocol and start command to apparatus. Sessions are performed automatically, and afterwards, data is sent back to software for storage and analysis.
Proper citation: Noldus: Erasmus Ladder (RRID:SCR_024695) Copy
Open source software tool providing automated analysis of foci images including foci counting and colocalization of foci. Focinator v2-0 is able to perform multi channel analysis of four channels and evaluation of protein-protein colocalization by comparison of up to three foci channels. This enables for example the quantification of foci in cells of specific cell cycle phase.
Proper citation: Focinator (RRID:SCR_024697) Copy
The objectives of Open Science Summit are to create an annual flagship event and news hub to build and maintain the identity of the international Open Science Movement as well as organize the various sub-communities into an effective, global, socio-technological force for rapid change in science/innovation policy. The Open Science Summit is the first and only event examining the full spectrum of the most crucial policy questions affecting the future of science. We consider the disruptive changes required to improve the functioning of 21st science, including institutional changes, new infrastructure for data driven science, and new practices. Scientists, Hackers, Students, Patients, and Activists, Entrepreneurs, Funders, Citizens should attend. Anyone who cares passionately about unleashing the full potential of Open Science to solve the big problems confronting humanity. Topics include: Synthetic Biology, Open Data, Open Access, Microfinance for Science, Citizen science, DIY Biology, Alternative Funding for Research, Open Source Drug Discovery, The Future of Patents, Accelerating Innovation, Open Genomics/Medicine, and More!
Proper citation: Open Science Summit (RRID:SCR_008006) Copy
http://www.globaleventslist.elsevier.com
THIS RESOURCE IS NO LONGER IN SERVICE, documented on March, 4, 2021. A meeting resource which lists current and up-coming scientific and medical events by discipline, location, and date.
Proper citation: GlobalEventList (RRID:SCR_013960) Copy
Forum for collaborative projects in the field of brain science. Everyone is invited to submit projects, either existing ones that you want to see featured or new ones that you want launch and work on in a collaborative, open way.
Proper citation: brainhack.org (RRID:SCR_000195) Copy
Biomedical technology research center designed to advance basis and clinical aspects of tissue engineering, to provide training for investigators and dissemination of scientific findings and new techniques. Expertise and facilities are focused on research, problem solving and training for biomedical community through integrated systems approach to challenges in tissue engineering. Mission for TERC is to engineer human tissues for medical impact. Includes Functional human tissue grafts: human tissues for application in regenerative medicine;Human disease models in vitro: in vitro models of human disease to provide new experimental tools to understand progression of disease, effects and mechanisms of drug action; Biological materials research: bioengineering tools for cell biology studies in context of tissue development, regeneration and disease.
Proper citation: Tissue Engineering Resource Center (RRID:SCR_000103) Copy
The Office of Research Services (ORS) provides support to the NIH research mission by planning, directing and delivering scientific and regulatory activities, public safety, security, and services for the NIH community.
Proper citation: NIH Office of Research Services (RRID:SCR_000987) Copy
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