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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Napari Resource Report Resource Website 10+ mentions |
Napari (RRID:SCR_022765) | data access protocol, software resource, web service | Multi dimensional image viewer for Python. Used for browsing, annotating, and analyzing large multi dimensional images. Can be coupled to machine learning and image analysis tools enabling more user friendly automated analysis. | Multi dimensional image viewer, large multi dimensional images, automated analysis | Free, Available for download, Freely available | https://github.com/napari/napari, https://zenodo.org/record/6598542#.YykVuHbMK3A | SCR_022765 | 2026-08-29 11:28:08 | 46 | ||||||||||
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Cincinnati Children's Hospital Medical Center; Cincinnati; Ohio Resource Report Resource Website |
Cincinnati Children's Hospital Medical Center; Cincinnati; Ohio (RRID:SCR_022643) | institution | Nonprofit academic medical center established in 1883. One of the oldest and most distinguished pediatric hospitals in the United States. Affiliated with the University of Cincinnati Academic Health Center. | pediatric acute care, pediatric hospital, academic medical center |
is parent organization of: Cincinnati Children's Hospital Animal Behavior Core Facility is parent organization of: Cincinnati Children's Hospital Transgenic Animal and Genome Editing Core Facility is parent organization of: Cincinnati Children's Hospital Viral Vector Core Facility is parent organization of: Cincinnati Children's Hospital Translational Trial Development and Support Laboratory Core Facility is parent organization of: Cincinnati Children's Hospital Vector Production Core Facility is parent organization of: Cincinnati Children's Hospital Mass Spectrometry Core Facility is parent organization of: Cincinnati Children's Hospital Pathology Research Core Facility is parent organization of: Cincinnati Children's Hospital NMR based Metabolomics Core Facility is parent organization of: Cincinnati Children's Hospital Research Flow Cytometry Core Facility is parent organization of: Cincinnati Children's Hospital Pluripotent Stem Cell Core Facility is parent organization of: Cincinnati Children's Hospital Office for Clinical and Translational Research Core Facility is parent organization of: Cincinnati Children's Hospital Discover Together Biobank Core Facility is parent organization of: Cincinnati Children's Hospital Imaging Research Center Core Facility is parent organization of: Cincinnati Children's Hospital DNA Sequencing and Genotyping Core Facility is parent organization of: Cincinnati Children's Hospital Critical Care Media Lab Core Facility is parent organization of: Cincinnati Children's Hospital Confocal Imaging Core Facility is parent organization of: Cincinnati Children's Hospital Cell Manipulation Laboratory Core Facility is parent organization of: Cincinnati Children's Hospital Cardiovascular Imaging Core Facility is parent organization of: Cincinnati Children's Hospital Data Management and Analysis Center Core Facility is parent organization of: Cincinnati Children's Hospital Comprehensive Mouse and Cancer Core Facility is parent organization of: Cincinnati Children's Hospital Cell Processing Core Facility is parent organization of: Cincinnati Children's Hospital Biomedical Informatics Core Facility is parent organization of: Cincinnati Children's Hospital Single Cell Genomics Core Facility is parent organization of: Cincinnati Children's Hospital Investigational Pharmacy Core Facility is parent organization of: Cincinnati Children's Hospital Microbial Metagenomics Analysis Center Microbial Genomics and Metagenomics Core Facility is parent organization of: Cincinnati Children's Hospital Magnetoencephalography Core Facility |
SCR_022643 | 2026-08-29 11:27:48 | 0 | |||||||||||
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Hugo Data Resource Report Resource Website |
Hugo Data (RRID:SCR_022763) | data or information resource, database, patient registry, people resource | Platform for individuals who want to make their own data available for research. Used by people to join network with others who wish to contribute to vital research in partnership with and alongside leading scientists. Personal tool for saving and displaying medical information. | Hugo Health, Inc, Hugo Health Kindred, Data, Medicine, own data available for research, join network for people who wish to contribute to research | Free, Freely available | SCR_022763 | 2026-08-29 11:27:49 | 0 | |||||||||||
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National Institute for Communicable Diseases; South Africa Resource Report Resource Website 1+ mentions |
National Institute for Communicable Diseases; South Africa (RRID:SCR_022662) | NICD | institution | National public health institute for South Africa, providing disease surveillance, specialised diagnostic services, outbreak response, public health research and capacity building to support the government’s response to communicable disease threats. | disease surveillance, specialised diagnostic services, outbreak response, public health research and capacity building | SCR_022662 | South Africa, NICD The National Institute for Communicable Diseases | 2026-08-29 11:28:05 | 8 | ||||||||||
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WPI: Constant Current Stimulus Isolator Resource Report Resource Website 1+ mentions |
WPI: Constant Current Stimulus Isolator (RRID:SCR_022660) | instrument resource | Automated bipolar pulsing for zero net charge on biological preparations. Includes Constant current, Unipolar and bipolar stimulation modes, Built-in non-compliance alarm, Optically isolated input Standard TTL triggering, DC test mode. Powered by 9 V alkaline or rechargeable batteries. | Isolator, stimulus isolator, constant current isolator, constant current, World Precision Instruments, USEDit, instrument, equipment | is listed by: USEDit | Restricted | Model_Number_A365 | SCR_022660 | Stimulus Isolator, WPI Constant Current Stimulus Isolator, Constant Current Stimulus Isolator | 2026-08-29 11:28:20 | 1 | ||||||||
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Standard BioTools: Biomark HD system Resource Report Resource Website 10+ mentions |
Standard BioTools: Biomark HD system (RRID:SCR_022658) | instrument resource | Automated, high performance PCR/qPCR system that uses microfluidics technology to process samples at nanoliter scale volumes for gene expression, genotyping, sample identification, copy number variation analysis and digital PCR. With wide range of integrated fluidic circuit (IFC) formats available, scaling from mid to high throughput on single system. | PCR, qPCR, microfluidics technology, nanoliter scale volumes, integrated fluidic circuit formats, USEDit, instrument, equipment | is listed by: USEDit | Restricted | SCR_022658 | Biomark™ HD system, BioMark HD, Fluidigm Biomark HD system, Biomark HD system (Fluidigm) | 2026-08-29 11:28:05 | 18 | |||||||||
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OHAUS: CS200P Portable Balance Resource Report Resource Website |
OHAUS: CS200P Portable Balance (RRID:SCR_022536) | instrument resource | OHAUS CS lightweight, portable, compact balance for use in laboratory, industrial, education and home use applications. CS offers great value without sacrificing accuracy for weighing jobs of 200g to 5000g. | USEDit, instrument, equipment, portable balance, compact balance, | is listed by: USEDit | Restricted | SCR_022536 | 2026-08-29 11:28:19 | 0 | ||||||||||
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NPI: Pressure Application Module Resource Report Resource Website 1+ mentions |
NPI: Pressure Application Module (RRID:SCR_022657) | PDES | instrument resource | Pneumatic drug ejection. Used to apply ionic and non-ionic substances in small amounts. Locally precise application with microJECT pipette holder with built-in valve. Also available as 19″ stand alone device. | Pneumatic drug ejection, USEDit, instrument, equipment | is listed by: USEDit | SCR_022657 | Pressure Application Module (NPI Electronic), PDES Pressure Application Module, PDES, NPI Electronics PDES | 2026-08-29 11:28:05 | 1 | |||||||||
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AIRR Data Commons Resource Report Resource Website |
AIRR Data Commons (RRID:SCR_022597) | data or information resource, narrative resource, portal, standard specification, topical portal | Network of distributed repositories that adhere to standards set out by AIRR Community. This collection contains standards and repositories either created by the AIRR community or approved for use within AIRR community. | Network of distributed repositories, repositories that adhere to standards, standards set out by AIRR Community, |
uses: ImmuneDB is related to: AIRR Community is related to: Adaptive Immune Receptor Repertoire Software Guidelines is related to: Adaptive Immune Receptor Repertoire: Repertoire Schema is related to: Adaptive Immune Receptor Repertoire Data Commons API Specification is related to: Minimal information about Adaptive Immune Receptor Repertoires is related to: Adaptive Immune Receptor Repertoire Data Model is related to: Adaptive Immune Receptor Repertoire Rearrangement Schema is related to: iReceptor |
Free, Freely available | https://fairsharing.org/3526 | SCR_022597 | 2026-08-29 11:27:48 | 0 | |||||||||
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University of Toyama; Toyama; Japan Resource Report Resource Website |
University of Toyama; Toyama; Japan (RRID:SCR_022751) | university | Japanese national university in Toyama Prefecture established in 1949. University of Toyama has three campuses, namely Gofuku, Sugitani, and Takaoka campuses. | is parent organization of: USVCAM | SCR_022751 | 2026-08-29 11:28:08 | 0 | ||||||||||||
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Minimal information about Adaptive Immune Receptor Repertoires Resource Report Resource Website |
Minimal information about Adaptive Immune Receptor Repertoires (RRID:SCR_022596) | MiAIRR | data or information resource, narrative resource, portal, standard specification, topical portal | Checklist of minimally required information that we recommend journals adopt, and that could form requirements for submission to public data repository. AIRR sequencing studies apply high throughput sequencing technologies to profile B cell receptors (BCRs) and T cell receptors (TCRs). Standards were developed by AIRR Community Minimal Standards Working Group. | Checklist of minimally required information journals adopt, public data repository requirements, AIRR Community Minimal Standards Working Group standards | is related to: AIRR Data Commons | Free, Freely available | https://fairsharing.org/FAIRsharing.31hec1 | SCR_022596 | 2026-08-29 11:28:04 | 0 | ||||||||
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Adaptive Immune Receptor Repertoire Software Guidelines Resource Report Resource Website |
Adaptive Immune Receptor Repertoire Software Guidelines (RRID:SCR_022595) | data or information resource, narrative resource, portal, standard specification, topical portal | AIRR Software Guidelines were created by AIRR Software Working Group to promote standards for AIRR software tools and resources in order to enable rigorous and reproducible immune repertoire research at largest scale possible.Established standards for software tools. Authors whose tools comply with this standard will, subject to ratification from AIRR Software WG, be permitted to advertise their tools as being AIRR compliant. Guidelines include compliance checklist, list of compliant tools, and recommended software evaluation data sets. | standards for AIRR software tools and resources, AIRR compliant, compliance checklist, list of compliant tools, recommended software evaluation data sets | is related to: AIRR Data Commons | Free, Freely available | https://fairsharing.org/FAIRsharing.eNSzPf | SCR_022595 | 2026-08-29 11:28:20 | 0 | |||||||||
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Adaptive Immune Receptor Repertoire Rearrangement Schema Resource Report Resource Website 1+ mentions |
Adaptive Immune Receptor Repertoire Rearrangement Schema (RRID:SCR_022592) | data or information resource, narrative resource, portal, standard specification, topical portal | Part of AIRR Data Model, defines annotations needed for rearrangements, which are sequences describing rearranged adaptive immune receptor chain (e.g., antibody heavy chain or TCR beta chain). Data for Rearrangement objects are stored as rows in tab delimited file and should be compatible with any TSV reader. Dataset is defined in this context as: TSV file, TSV with companion YAML file containing metadata, or directory containing multiple TSV files and YAML files. | AIRR Data Model, annotations needed for rearrangements, rearranged adaptive immune receptor chain sequences, | is related to: AIRR Data Commons | PMID:29144493 | Free, Freely available | https://fairsharing.org/FAIRsharing.zwjNAh | SCR_022592 | 2026-08-29 11:28:04 | 1 | ||||||||
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RefSeq non-redundant proteins Resource Report Resource Website 50+ mentions |
RefSeq non-redundant proteins (RRID:SCR_022748) | data or information resource | Non-redundant RefSeq protein records are currently provided for archaeal and bacterial RefSeq genomes, with exception of selected reference genomes, by NCBI prokaryotic genome annotation pipeline. This scope definition may change in the future to include additional RefSeq sub-kingdoms or other organism groups and some GenBank conceptual translation protein records may provide cross-links to RefSeq non-redundant proteins. | NIH, NLM, Non-redundant RefSeq protein records, RefSeq protein records, NCBI prokaryotic genome annotation, protein records |
is related to: RefSeq is related to: RefSeqGene |
Free, Freely available | SCR_022748 | 2026-08-29 11:28:07 | 55 | ||||||||||
|
OrthoVenn2 Resource Report Resource Website 100+ mentions |
OrthoVenn2 (RRID:SCR_022504) | data access protocol, software resource, web service | Web server for whole genome comparison and annotation of orthologous clusters across multiple species.Works on any operating system with modern browser and Javascript enabled. Used to identify orthologous gene clusters and supports user define species to upload customized protein sequences. Interactive graphic tool which provides Venn diagram view for comparing multiple species protein sequences. | whole genome comparison and annotation, orthologous clusters across multiple species, identify orthologous gene clusters, comparing multiple species protein sequences | National Natural Science Foundation of China | PMID:31053848 | Free, Freely available | SCR_022504 | 2026-08-29 11:28:19 | 288 | |||||||||
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Artec 3D: Eva Fast 3D scanner Resource Report Resource Website |
Artec 3D: Eva Fast 3D scanner (RRID:SCR_022589) | instrument resource | 3D scanner for making quick, textured, and accurate 3D models of medium sized objects such as human bust, alloy wheel, or motorcycle exhaust system. Used for capturing objects of almost any kind, including objects with black and shiny surfaces. | Artec3D, 3D scanner, 3D models, medium sized objects, capturing objects, instrument, equipment, USEDit |
is listed by: USEDit is listed by: MfN Berlin Micro-CT Laboratory Core Facility |
Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022589.pdf | SCR_022589 | 2026-08-29 11:28:04 | 0 | |||||||||
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Artec 3D: Space Spider Resource Report Resource Website 1+ mentions |
Artec 3D: Space Spider (RRID:SCR_022588) | instrument resource | 3D scanner based on blue light technology. Precision instrument for CAD users and engineers. Used for capturing small objects or intricate details of large industrial objects in high resolution, with accuracy and brilliant color. | Artec3D, 3D scanner, blue light technology, capturing small objects, intricate details of large industrial objects, instrument, equipment, USEDit |
is listed by: USEDit is listed by: MfN Berlin Micro-CT Laboratory Core Facility |
Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_022588.pdf | SCR_022588 | 2026-08-29 11:28:03 | 2 | |||||||||
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PavCA project Resource Report Resource Website 1+ mentions |
PavCA project (RRID:SCR_022508) | PavCA | data or information resource, portal, topical portal | Project related to tracking behavior. Used to identify subgroups of individuals that differentially attribute incentive value to food cue. Includes apparatus for studying Pavlovian conditioned approach behavior. Customized rat PavCA chambers are constructed based on modular devices purchased from Med-Associates. Code used to operate equipment and collect data was written using Med-Associates’ MEDSTATE programming language. This program is then loaded into Med-PC V operating program, also created by Med-Associates. | Behavior, behavior analysis, Pavlovian conditioning, apparatus, Pavlovian conditioned approach, Instrument, OpenBehavior |
is listed by: OpenBehavior has parent organization: University at Buffalo; New York; USA |
Free, Freely available | SCR_022508 | Pavlovian Conditioned Approach, PavCA | 2026-08-29 11:28:01 | 2 | ||||||||
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Surgisphere Resource Report Resource Website |
Surgisphere (RRID:SCR_022759) | organization | American healthcare analytics company established in 2008. Originally textbook marketing company, it came under scrutiny in May 2020 after it had provided large datasets of COVID-19 patients which were subsequently found to be extremely unreliable. The questionable data was used in studies published in The Lancet and The New England Journal of Medicine in May 2020. On 15 June 2020, company website was taken offline. | medical records, healthcare analytics company, unreliable datasets | SCR_022759 | 2026-08-29 11:28:08 | 0 | ||||||||||||
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ExonScan Web Server Resource Report Resource Website 1+ mentions |
ExonScan Web Server (RRID:SCR_022516) | data access protocol, software resource, web service | Software framework for modeling sequence motifs based on maximum entropy principle. | modeling sequence motifs, maximum entropy principle | has parent organization: MIT; Cambridge; Massachusetts; United States | PMID:15285897 | Free, Freely available | SCR_022516 | ExonScan | 2026-08-29 11:28:01 | 2 |
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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