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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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BrainTechSci. Resource Report Resource Website |
BrainTechSci. (RRID:SCR_000113) | blog, data or information resource, narrative resource | Blog about brain technology and science news that covers topics such as high-resolution brain imaging, brain maps API and whole-brain atlases. | brain, science, blog, technology, writing, education | Free | nlx_51508 | SCR_000113 | BrainTechSci | 2026-09-05 06:31:09 | 0 | |||||||||
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BAMS Connectivity Resource Report Resource Website 1+ mentions |
BAMS Connectivity (RRID:SCR_000561) | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 9,2022. Database of information about brain region circuitry, it collates data from the literature on tract tracing studies and provides tools for analysis and visualization of connectivity between brain regions., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | brain, neural circuitry, connectivity, brain region, neuroanatomy, neuronal tract tracing, connectome |
is used by: NIF Data Federation is related to: Integrated Manually Extracted Annotation has parent organization: Brain Architecture Management System |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_144138 | http://brancusi.usc.edu/bkms/, http://brancusi.usc.edu/ | SCR_000561 | Brain Architecture Management System Connectivity Data | 2026-09-05 06:31:10 | 1 | |||||||
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Internet Brain Volume Database Resource Report Resource Website 1+ mentions |
Internet Brain Volume Database (RRID:SCR_002060) | IBVD | data or information resource, database | A database of brain neuroanatomic volumetric observations spanning various species, diagnoses, and structures for both individual and group results. A major thrust effort is to enable electronic access to the results that exist in the published literature. Currently, there is quite limited electronic or searchable methods for the data observations that are contained in publications. This effort will facilitate the dissemination of volumetric observations by making a more complete corpus of volumetric observations findable to the neuroscience researcher. This also enhances the ability to perform comparative and integrative studies, as well as metaanalysis. Extensions that permit pre-published, non-published and other representation are planned, again to facilitate comparative analyses. Design strategy: The principle organizing data structure is the "publication". Publications report on "groups" of subjects. These groups have "demographic" information as well as "volume" information for the group as a whole. Groups are comprised of "individuals", which also have demographic and volume information for each of the individuals. The finest-grained data structure is the "individual volume record" which contains a volume observation, the units for the observation, and a pointer to the demographic record for individual upon which the observation is derived. A collection of individual volumes can be grouped into a "group volume" observation; the group can be demographically characterized by the distribution of individual demographic observations for the members of the group. | anatomy, volume, dsm-iv, normal, schizophrenia, autistic disorder, bipolar disorder, major depressive disorder, alzheimer's disease, attention deficit-hyperactivity disorder, alcohol dependence, dementia, traumatic brain injury, borderline personality disorder, obsessive-compulsive disorder, asperger syndrome, brain, brain structure, in vivo, ex vivo, male, female, gorilla beringei beringei, pongo pygmaeus, volumetric analysis |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: NIF Data Federation is related to: Integrated Manually Extracted Annotation has parent organization: Harvard Medical School; Massachusetts; USA |
Normal, Alzheimers disease, Seizure, Complex febrile seizure, Holoprosencephaly, Alcohol dependence, Bipolar Disorder, Traumatic brain injury, Schizophrenia | The Human Brain Project ; NINDS NS034189 |
PMID:21931990 | Free, Available for download, Freely available | nif-0000-00033 | http://www.nitrc.org/projects/ibvd | http://www.cma.mgh.harvard.edu/ibvd/ | SCR_002060 | 2026-09-05 06:31:15 | 4 | |||
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EPMBA.ORG: Electronic Prenatal Mouse Brain Atlas Resource Report Resource Website 1+ mentions |
EPMBA.ORG: Electronic Prenatal Mouse Brain Atlas (RRID:SCR_001882) | EPMBA | atlas, data or information resource | The Electronic Prenatal Mouse Brain Atlas, EPMBA, at present consists of two sets of annotated images of coronal sections from Gestational Day (GD) 12 heads and GD 16 brains of C57BL/6J mice. Ten micron thick sections were stained with hematoxylin and eosin. Images were prepared at various resolutions for annotations and for high resolution presentation. A subset of sections were annotated and linked to anatomical terms. Additionally, horizontal sections of a GD 12 head were aligned and re-assembled into a 3D volume for digital sectioning in arbitrarily oblique planes. These images were captured using a Nikon E800 stereomicroscope with a 10X objective. The resolution is 1.35 pixels/micrometer. The PC program used to grab the images, Microbrightfield's Neurolucida (version 6), stitched together a mosaic of between 10 and 50 high-res images for each tissue slice, while the user focused the scope for each mosaic tile. Since the nature of optic lenses is to focus on one central point, it was difficult to obtain a uniformly-focused field of vision; as such, small areas of these images are blurred. Images were then transferred to a Macintosh and processed in Adobe Photoshop (version 7). Color levels were adjusted for maximum clarity of the tissue, and areas surrounding the tissue were cleared of artifacts. Each image is approximately 3350 pixels wide by 2650 pixels high. A scale bar with a length of 1350 pixels/mm is visible in the lower right-hand corner of each image. The annotations have been completed for the Atlas of Developing Mouse Brain Gestational (Embryonic) Day 12 (7/5/07) as well as the Atlas of Developing Mouse Brain Embryonic Day 16 (4/26/07). The 3D EPMBA data set has been mounted on a NeuroTerrain Atlas Server (NtAS). (6/27/07). | embryonic, brain, c57bl/6j, coronal, developing, developmental, gestational, head, horizontal sections, image, mouse, prenatal | has parent organization: East Tennessee State University; Tennessee; USA | Human Brain Project ; NIMH 263-MD-414639 |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-10452 | SCR_001882 | EPMBA.org, Electronic Prenatal Mouse Brain Atlas | 2026-09-05 06:31:15 | 1 | ||||||
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Human Tissue and Organ for Research Resource (HTORR) Resource Report Resource Website |
Human Tissue and Organ for Research Resource (HTORR) (RRID:SCR_002859) | HTORR | biomaterial supply resource, material resource, tissue bank | NDRI’s Human Tissue and Organs for Research Resource (HTORR) Program has been funded by the National Institutes of Health (NIH) for over 30 consecutive years to support research programs across multiple disciplines. It is through the HTORR program that NDRI provides academic biomedical investigators with donated normal and diseased human tissues and organs recovered from a diverse donor pool using customized procurement, processing, and preservation and distribution protocols. Our HTORR Program supports academic biomedical research investigators needs by providing: Access to a wide array of human biospecimens from any body system * Customized procurement in a variety of preservation formats including fresh, frozen, and fixed suitable for various analytical techniques * Reduced costs for tissue procurement * Technical support to design your studies utilizing human biospecimens * Letters of support and budgetary information for grant applications | tissue, organ, nervous system, pulmonary system, cardiovascular system, endocrine system, eye, bone, cartilage, normal, diseased, human immunodeficiency virus, heart, kidney, lung, brain, liver, eye, bone, joint, disease, rare disease, endocrinology, eye bank, immunology, infectious disease, nephrology, nervous system, ophthalmology, pathology, pulmonary system, research, specimen, toxicology, transplantation, catalog |
is listed by: One Mind Biospecimen Bank Listing is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology has parent organization: National Disease Research Interchange has parent organization: National Center for Research Resources |
Normal, Disease, Human immunodeficiency virus, Rare disease | NIH Office of the Director U42 OD011158 | Free, Freely available | nif-0000-25417 | https://orip.nih.gov/comparative-medicine/programs/genetic-biological-and-information-resources | http://www.ncrr.nih.gov/clinical%5Fresearch%5Fresources/resource%5Fdirectory/human_tissue_and_organ_resource_for_research/ | SCR_002859 | Human Tissue Organ Resource for Research, Human Tissues and Organs for Research, Human Tissues and Organs for Research (HTOR), Human Tissues Organs for Research | 2026-09-05 06:31:19 | 0 | |||
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Retina Project Resource Report Resource Website 1+ mentions |
Retina Project (RRID:SCR_002884) | Retina Project | atlas, data or information resource, spatially referenced dataset | Collection of images from cell type-specific protein expression in retina using BAC transgenic mice. Images from cell type-specific protein expression in retina using BAC transgenic mice from GENSAT project. | electrophysiology, protein expression, fluorescent, gene, amacrine cell, astrocyte, bipolar cell, blood vessel, brain, cell, ganglion cell layer, central nervous system, circuit, horizontal cell, hybridization, microglia, adult mouse, muller cell, neocortex, neuronal, photoreceptor, protein, recombinase, retina, spinal cord, mutant mouse strain, bac, retinal cell, cell type, night vision, direction, neuronal circuitry, connectivity, image collection |
is used by: NIF Data Federation has parent organization: GENSAT at NCBI - Gene Expression Nervous System Atlas |
Department Of Health And Human Services ; NINDS N01 NS02331 |
PMID:19648912 | Free, Freely available | nif-0000-25587 | SCR_002884 | GENSAT Retina Project, Retina Project from GENSAT, The Retina Project, The Retina Project from GENSAT, GENSAT - Retina Project | 2026-09-05 06:31:19 | 2 | |||||
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University of Kentucky Alzheimer's Disease Center Resource Report Resource Website |
University of Kentucky Alzheimer's Disease Center (RRID:SCR_008767) | UK-ADC | data or information resource, disease-related portal, portal, topical portal | Alzheimer's Disease Center that serves as the focal point for all Alzheimer's disease-related activities at the University of Kentucky and the Commonwealth of Kentucky providing an environment and core resources that catalyze innovative research, outreach, education, and clinical programs. Their ADC plans to build on its historic strengths and capitalize on emerging opportunities to provide an infrastructure that supports research designed to translate knowledge into therapeutic strategies for AD. They focus on two interrelated themes: Transitions and Translation. Their overall emphasis is to more effectively bridge the gap between basic research and clinical studies by facilitating translational efforts. They also carefully characterize transitions across the spectrum of cognitive impairment (normal/ preclinical AD/ MCI/ dementia), with focus on definition of early disease, and continue to support neuropathology as the bedrock of our center. The Alzheimer Disease Center's 2006-2011 grant award from the National Institute on Aging consists of five cores: * Administrative Core * Clinical Core * Biostatistics and Data Management Core * Neuropathology Core * Education & Information Transfer Core | late adult human, brain, memory, clinic, alzheimer |
has parent organization: Sanders Brown Center on Aging has parent organization: University of Kentucky; Kentucky; USA is parent organization of: University of Kentucky's Alzheimer's Disease Center |
Cognitive impairment, Alzheimer's disease, Aging, Mild cognitive impairment, Dementia | NIA | nlx_144058 | http://www.mc.uky.edu/coa/clinicalcore/ADC%20home%20page.html | SCR_008767 | UK Alzheimer's Disease Center, University of Kentucky Alzheimer's Disease Center, Alzheimer's Disease Center at the University of Kentucky | 2026-09-05 06:30:02 | 0 | |||||
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SPM Resource Report Resource Website 5000+ mentions Issue |
SPM (RRID:SCR_007037) | SPM | data analysis software, data processing software, image analysis software, software application, software resource | Software package for analysis of brain imaging data sequences. Sequences can be a series of images from different cohorts, or time-series from same subject. Current release is designed for analysis of fMRI, PET, SPECT, EEG and MEG. | analysis, brain, imaging, data, sequence, fMRI, PET, SPECT, EEG, MEG, bio.tools |
uses: Neuroimaging Data Model uses: imcalc: SPM batch image calculator is used by: rsfMRI_fconn calculation is used by: Automatic Analysis is used by: auto_acpc_reorient is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: 3DVC is listed by: Debian is listed by: bio.tools is listed by: SoftCite is affiliated with: Clinical Toolbox for SPM is affiliated with: Statistical non-Parametric Mapping is related to: WFU Biological Parametric Mapping Toolbox is related to: vis: SPM Visualized Statistics toolbox is related to: LEAD-DBS is related to: CCHMC Pediatric Brain Templates is related to: IBMA toolbox is related to: ArtRepair for robust fMRI is related to: ASL data processing tool box is related to: BrainVISA / Anatomist is related to: MRIcro Software is related to: xjView: A Viewing Program For SPM is related to: BrainMagix SPM Viewer is related to: MarsBaR region of interest toolbox for SPM is related to: NIRS-SPM is related to: SPM SS - fMRI functional localizers is related to: Wisconsin White Matter Hyperintensities Segmentation Toolbox is related to: Dementia-specific FDG PET Template for SPM analyses is related to: SPM Anatomy Toolbox is related to: MIPAV: Medical Image Processing and Visualization is related to: MATLAB is related to: hMRI-toolbox is related to: Sandwich Estimator Toolbox has parent organization: University College London; London; United Kingdom is required by: MRTool provides: TSDiffAna has plug in: ICN_Atlas works with: UManitoba - JHU Functionally Defined Human White Matter Atlas works with: NIAG Addiction Data works with: ICN_Atlas works with: spm_auto_reorient_coregister works with: Computational Anatomy Toolbox for SPM works with: FieldTrip works with: POAS4SPM |
Free, Available for download, Freely available | biotools:SPM | https://github.com/spm/spm12, https://bio.tools/SPM | https://www.fil.ion.ucl.ac.uk/spm/ | SCR_007037 | Statistical Parametric Mapping, SPM5, SPM2, SPM12, Statistical Parametric Mapping Software, SPM99, SPM8, SPM, SPM96 | 2026-09-05 06:30:00 | 8748 | |||||
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National Resource for Aplysia Resource Report Resource Website 10+ mentions |
National Resource for Aplysia (RRID:SCR_008361) | National Resource for Aplysia | biomaterial supply resource, material resource, organism supplier | Center where Aplysia californica are cultured and raised for research purposes. Aplysia from the facility serve in research on genomics, human brain function, toxicology for developmental studies, natural products, chemistry for isolation of novel anti-tumor and antibacterial compounds, in the study of transport by digestive tissues and have potential for use in studies of substance addiction and nerve senescence and regeneration. | disease, genomics, aplysia californica, research, brain | has parent organization: University of Miami; Florida; USA | NCRR ; NIH Office of the Director P40 OD010952 |
nif-0000-25472 | http://aplysia.miami.edu/ | SCR_008361 | 2026-09-05 06:30:02 | 14 | |||||||
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Is the Brain (Like) a Computer Resource Report Resource Website |
Is the Brain (Like) a Computer (RRID:SCR_008809) | Is the Brain (Like) a Computer | book, data or information resource, narrative resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 2, 2016. Is the Brain (Like) a Computer is an e-book written by Prof. Mark Dubin. It consists of the following: Introduction. Why do we consider the relationship of brains and computers and what does this have to do with consciousness? What's a Brain Made Of? A thought experiment. Test Drive a Turing Machine. A theoretical approach. Interim Summary. Many of the main pages have links to additional information. When you click on one of those links a NEW page will open ON TOP of the page you are clicking from. This convention is adopted so that you can look at the additional information and then easily return to the main page you got there from. | brain, human, image | has parent organization: University of Colorado; Colorado; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_144392 | SCR_008809 | Is the Brain Like a Computer?, Is the Brain Like a Computer | 2026-09-05 06:30:02 | 0 | |||||||
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HDBase Resource Report Resource Website |
HDBase (RRID:SCR_007132) | HDBase | data or information resource, data set, disease-related portal, portal, topical portal | A community website for Huntington''s Disease (HD) research that currently contains Y2H and Mass spectrometry protein-protein interaction data centered around the HD protein (huntingtin) and information on therapeutic studies in mouse. Also available are raw Human and Mouse Affymetrix Microarray data. The protein interaction data is from several sources, including interactions curated from the literature by ISB staff, experimentally determined interactions produced by Bob Hughes and colleagues at Prolexys (currently password protected), and interactions reported in a recent publication by Goehler et al from Eric Wanker''s lab. Content areas that may be covered by the site include the following: * Therapeutic studies in mouse, primarily drug screens. * HD mouse models with a focus on timelines of disease progression. * Antibodies used in HD research. * Microarray gene expression studies. * Genes and proteins relevant to HD research. This includes HD itself, the growing list of proteins thought to interact directly or indirectly with huntingtin (Htt), and other genes and proteins implicated in the disease process. * Molecular pathways thought to be involved in the disease process. * Timelines of disease for Mouse models | drug, gene expression, huntingtin, mass spectrometry, microarray, protein interaction, protein-protein interaction, y2h, mouse model, treatment, disease, phenotype, brain, striatum, adipose, muscle, gene, protein, antibody, pathway |
uses: Cytoscape has parent organization: Institute for Systems Biology; Washington; USA |
Huntington''s disease, Control | Hereditary Disease Foundation | nif-0000-00153 | SCR_007132 | HDBase - A Community Website for Huntingtons Disease Research, HDBase - A Community Website for Huntington''s Disease Research | 2026-09-05 06:30:01 | 0 | ||||||
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Computational Neurobiology and Imaging Center Resource Report Resource Website 1+ mentions |
Computational Neurobiology and Imaging Center (RRID:SCR_013317) | CNIC | data or information resource, data set, portal, software resource, topical portal | Center to advance research and training in mathematical, computational and modern imaging approaches to understanding the brain and its functions. Software tools and associated reconstruction data produced in the center are available. Researchers study the relationships between neural function and structure at levels ranging from the molecular and cellular, through network organization of the brain. This involves the development of new computational and analytic tools for imaging and visualization of 3-D neural morphology, from the gross topologic characteristics of the dendritic arbor to the fine structure of spines and their synapses. Numerical simulations of neural mechanisms based on these structural data are compared with in-vivo and in-vitro electrophysiological recordings. The group also develops new theoretical and analytic approaches to exploring the function of neural models of working memory. The goal of this analytic work is to combine biophysically realistic models and simulations with reduced mathematical models that capture essential dynamical behaviors while reproducing the functionally important features of experimental data. Research areas include: Imaging Studies, Volume Integration, Visualization Techniques, Medial Axis Extraction, Spine Detection and Classification, Applications of Rayburst, Analysis of Spatially Complex Structures, Computational Modeling, Mathematical and Analytic Studies | brain, confocal, in-vitro, in-vivo, microscopy, morphology, morphometric, multi-photon, neural, neural function, neuron, simulation, stack, structure, synapse, topologic, variable, vessel, visualization, image, neuroscience, neurobiology, reconstruction, modeling, spatial, rayburst, spine, arbor, visual, tiling, imaging |
lists: NeuronStudio lists: Rayburst Open-Source Code lists: Volume Integration and Alignment System lists: Volume Integration and Alignment System Source Code lists: Polygonized Viewer lists: NeuroGL lists: TIFF Stack Sub-Sampler is related to: NeuroMorpho.Org is related to: Rayburst Open-Source Code is related to: Polygonized Viewer is related to: NeuroGL is related to: TIFF Stack Sub-Sampler is related to: NeuronStudio is related to: Volume Integration and Alignment System is related to: Volume Integration and Alignment System Source Code has parent organization: Icahn School of Medicine at Mount Sinai; New York; USA |
Aging | Howard Hughes Medical Institute ; NIDCD ; NIA ; NIMH |
nif-0000-10200 | http://www.mssm.edu/cnic/ | SCR_013317 | 2026-09-05 06:30:05 | 7 | ||||||
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HBP: Healthy Brain Project Resource Report Resource Website |
HBP: Healthy Brain Project (RRID:SCR_013137) | HBP | data or information resource, disease-related portal, portal, research forum portal, topical portal | Research forum portal to address brain status by acquiring comprehensive, multimodal data from healthy humans across the lifespan to characterize brain status, assess its change over time, and associate composite descriptors of brain status. Specifically, the measurements are acquired noninvasively by existing neuroimaging technologies (structural MRI, functional MRI, magnetic resonance spectroscopy, diffusion MRI, and magnetoencephalography); in addition, genetic, cognitive, language, and lifestyle data are acquired. Goals: * Derive the Brain Health Index- An integrative assessment of brain status derived from multimodal measurements of brain structure, function, and chemistry. * Continue acquiring data to construct the first-ever databank on brain, cognitive, language and genetic measurements for healthy people across the lifespan. * Provide a novel and unique dataset by which to: characterize brain status, assess its change over time, and associate it with genetic makeup, cognitive function, and language abilities. * Forecast future brain health and disease based on current measurements and guide physicians towards new interventions and evaluate interventions as they develop. * Extend to siblings and other family members to further assess the genetic influences and inheritability. | cognition, language, genetic, cognitive, brain, structure, function, longitudinal, multimodal, neuroimaging, adult human, late adult human, neurological exam, neuropsychological exam, cognitive assessment, structured interview, questionnaire, mental health status, structural mri, fmri, mr spectroscopy, diffusion mri, meg, dna, genetic assessment, montreal cognitive assessment, 3ms, mmse, language assessment, lifestyle, controlled oral word association test | has parent organization: University of Minnesota Twin Cities; Minnesota; USA | Aging, Healthy | nlx_153925 | SCR_013137 | Healthy Brain Project, Minnesota Women Healthy Brain Project, Women Healthy Brain Project, Minnesota Healthy Brain Project | 2026-09-05 06:30:04 | 0 | |||||||
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Letswave Resource Report Resource Website 10+ mentions |
Letswave (RRID:SCR_016414) | data processing software, data visualization software, software application, software resource, software toolkit | Open source electroencephalogram (EEG) signal processing toolbox to process and visualise EEG/MEG data and other neurophysiological signals. | process, visualise, EEG, MEG, data, neurophysiological, signal, brain, neuroscience | is related to: MATLAB | Free, Available for download, Freely available | https://www.letswave.org/ | SCR_016414 | 2026-09-05 06:30:07 | 27 | |||||||||
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Nutil - Neuroimaging utilities Resource Report Resource Website 10+ mentions |
Nutil - Neuroimaging utilities (RRID:SCR_017183) | Nutil | data processing software, image analysis software, image processing software, software application, software resource, software toolkit | Software toolbox to simplify and streamline mechanism of pre and post processing 2D brain image data. Neuroscience image processing and analysis utilities. Stand alone application that runs on all operating systems. Nutil is part of the QUINT workflow. | neuroscience, 2D, brain, image, data, processing, analysis |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: Allen Institute for Brain Science has parent organization: University of Oslo; Oslo; Norway works with: VisuAlign |
European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Framework Partnership Agreement No. 650003 (HBP FPA) and the European Union’s Horizon Europe Programme for Research Infrastructures Grant Agreement No. 101147319 (EBRAINS 2.0). | PMID:32973479 | Free, Available for download, Freely available | https://nutil.readthedocs.io; https://github.com/Neural-Systems-at-UIO/nutil | SCR_017183 | Neuroimaging utilities | 2026-09-05 06:30:08 | 28 | |||||
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Stress Mice Portal Resource Report Resource Website 1+ mentions |
Stress Mice Portal (RRID:SCR_017572) | data or information resource, data set, database, portal, project portal | Sapienza University of Rome and Cineca consortium portal. Used for analyzing published RNAseq transcriptomes obtained from brain of mice exposed to different kinds of stress protocols, to generate database of stress related differentially expressed genes and to identify factors contributing to vulnerability or resistance to stress. Allows to query database of RNAseq data. | Spienza University of Rome, Cineca, RNA seq, transcriptome, data, brain, mouse, stress, gene, expresison | Free, Available for download, Freely available | SCR_017572 | 2026-09-05 06:30:09 | 1 | |||||||||||
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MouseLight Neuron Browser Resource Report Resource Website 10+ mentions |
MouseLight Neuron Browser (RRID:SCR_016669) | software resource, web application | Interactive web platform for anyone to explore, search, filter and visualize the single neuron reconstructions. | explore, search, filter, visualize, single, neuron, reconstruction, mouse, brain |
has parent organization: Janelia Research is provided by: MouseLight Project |
Free, Freely available, Tutorial available, Acknowledgement required | http://mouselight.janelia.org/ | SCR_016669 | Neuron Browser, NeuronBrowser, MouseLight Neuron Browser | 2026-09-05 06:30:21 | 31 | ||||||||
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MRIcron Resource Report Resource Website 1000+ mentions |
MRIcron (RRID:SCR_002403) | MRIcron | data processing software, data visualization software, software application, software resource | Software tool as a cross-platform NIfTI format image viewer. Used for viewing and exporting of brain images. MRIcroGL is a variant of MRIcron. | NIfTI, format, image, viewer, exporting, brain, image, processing, data, bio.tools |
is used by: XFSL: An FSL toolbox is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps is listed by: neurodebian is listed by: Debian is listed by: bio.tools is listed by: SoftCite is related to: Colour maps for brain imaging has parent organization: University of South Carolina; South Carolina; USA |
PMID:17583985 PMID:11568431 |
BSD License | biotools:MRIcron, nif-0000-00122 | https://sources.debian.org/src/mricron/, http://www.mccauslandcenter.sc.edu/mricro/, http://www.nitrc.org/projects/mricron, http://neuro.debian.net/pkgs/mricron.html, https://bio.tools/MRIcron | SCR_002403 | mricron - magnetic resonance image conversion viewing and analysis | 2026-09-05 06:30:20 | 2312 | |||||
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brainhack.org Resource Report Resource Website 1+ mentions |
brainhack.org (RRID:SCR_000195) | brainhack.org | data or information resource, portal | Forum for collaborative projects in the field of brain science. Everyone is invited to submit projects, either existing ones that you want to see featured or new ones that you want launch and work on in a collaborative, open way. | magnetic resonance imaging assay, image, fmri, brain, science, neuroimaging, project |
is affiliated with: HBM Hackathon has parent organization: Neuro Bureau |
PMID:27042293 PMID:33932337 |
The community can contribute to this resource | nlx_149390 | SCR_000195 | BrainHack | 2026-09-05 06:30:35 | 1 | ||||||
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Nighres Resource Report Resource Website 1+ mentions |
Nighres (RRID:SCR_016287) | data processing software, image analysis software, software application, software resource, software toolkit | Software package for processing of high-resolution neuroimaging data. Nighres is a community-developed project that aims to make neuroscience data tools easier to install, use and extend. | neuroimaging, python, high-resolution, MRI, ultra-high, field, laminar, brain | Free, Available for download, Runs on Linux | http://nighres.readthedocs.io/en/latest/ | https://github.com/juhuntenburg/laminar_python | SCR_016287 | nighres | 2026-09-05 06:28:06 | 3 |
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