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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Pypreclin
 
Resource Report
Resource Website
1+ mentions
Pypreclin (RRID:SCR_021526) data processing software, image processing software, software application, software resource Software Python tool to processes raw macaque fMRI images using algorithms embedded in automatic pipeline. Raw macaque fMRI images, fMRI images, macaque images, Python, OpenBehavior is listed by: OpenBehavior
is related to: Pypreclin project
DOI:10.1016/j.neuroimage.2019.116353 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pypreclin/ SCR_021526 2026-09-05 06:29:41 8
Oculomatic
 
Resource Report
Resource Website
Oculomatic (RRID:SCR_021525) data acquisition software, data processing software, software application, software resource Software tool for high speed eye tracking for Point Gray USB3.0 cameras.Oculomatic software tracks eye position within acquired image frame at frame rate dictated by image sensor. High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior is listed by: OpenBehavior
is related to: Oculomatic Eye Tracking project
DOI:10.1016/j.jneumeth.2016.06.016 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/oculomatic-eye-tracking/ SCR_021525 Oculomatic eye tracking 2026-09-05 06:29:41 0
openEyeTrack
 
Resource Report
Resource Website
1+ mentions
openEyeTrack (RRID:SCR_021401) software resource Open source software tool used as part of multithreaded eye tracker.Video based eye tracker. Multithreaded eye tracker, tracking eye position system, head fixed application, OpenBehavior is listed by: OpenBehavior
is related to: openEyeTrack project
DOI:10.21105/joss.01631 Free, Freely available https://edspace.american.edu/openbehavior/project/openeyetrack/ SCR_021401 2026-09-05 06:29:39 1
Open-tES project
 
Resource Report
Resource Website
Open-tES project (RRID:SCR_021487) data or information resource, instrument resource, portal, project portal Project is related to transcranial Electrical Stimulation.Included system contains aluminum box stimulator with banana connectors for both anode and cathode on front panel,power supply on rear, power switch and serial port, LCD screen and three buttons on top panel that are used to input settings for stimulator. Device for delivering non-invasive neuromodulation techniques such as transcranial direct current stimulation. If device is used for certain types of tDCS (otDCS and tPCs) or external triggering, computer control must be used. Microcontroller is used to regulate operating speed and pulse width modulation switching frequency administrated by device. Stimulation system, non-invasive neuromodulation techniques delivery, transcranial direct current stimulation, stimulator, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1371/journal.pone.0236061 Free, Freely available SCR_021487 Open-tES 2026-09-05 06:29:40 0
Pathfinder
 
Resource Report
Resource Website
100+ mentions
Pathfinder (RRID:SCR_021520) data analysis software, data processing software, software application, software resource Open source software for analyzing spatial navigation search strategies. Analyzing spatial navigation search strategies, spatial navigation, search strategies, OpenBehavior is listed by: OpenBehavior
is related to: Pathfinder project
DOI:10.1101/715961 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pathfinder/ SCR_021520 2026-09-05 06:29:41 295
OpenMonkeyStudio project
 
Resource Report
Resource Website
OpenMonkeyStudio project (RRID:SCR_021409) data or information resource, instrument resource, portal, project portal Project for tracking interactions among freely moving monkeys.System includes integrated hardware and software for pose tracking in freely moving rhesus macaques. Pose tracking, non human primates, motion capture system, 3D pose, freely moving macaques, interactions among freely moving monkeys, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1038/s41467-020-18441-5 Free, Freely available SCR_021409 OpenMonkeyStudio 2026-09-05 06:29:39 0
Rodent Arena Tracker project
 
Resource Report
Resource Website
Rodent Arena Tracker project (RRID:SCR_021408) RAT data or information resource, instrument resource, portal, project portal Project related to rodent tracking and task control.Provides closed loop system for machine vision rodent tracking and task control created by scientist from Washington University. System to track and report mouse activity while they are contained in simple arena. System uses OpenMV M7 microcontroller to acquire images of arena and process them in real-time to report mouse centroid data to text file. Wireless position tracker for automatically tracking mice in high contrast arenas. Wireless position tracker, automatically tracking mice, positional behavior data, OpenMV M7 microcontroller, acquire arena images, mouse movement, OpenMV Cam M7 hardware, OpenBehavior, instrument, equipment, USEDit, Instrument is listed by: OpenBehavior
has parent organization: Washington University in St. Louis; Missouri; USA
DOI:10.1523/eneuro.0485-19.2020 Free, Freely available SCR_021408 Rodent Arena Tracker 2026-09-05 06:29:39 0
NeRD
 
Resource Report
Resource Website
NeRD (RRID:SCR_021582) data or information resource, instrument resource, portal, project portal Portal provides open source neural recording device for wireless transmission of local field potential data in freely behaving animals. Used for electrophysiological recording of local field potentials in freely behaving animals. Instrument, neural recording device, wireless transmission, local field potential data, freely behaving animals, OpenBehavior is listed by: OpenBehavior Free, Freely available SCR_021582 Neural Recording Device 2026-09-05 06:29:42 0
NINscope software
 
Resource Report
Resource Website
NINscope software (RRID:SCR_021583) software resource Sofware tool for use with NINscope. Software resource, OpenBehavior is listed by: OpenBehavior
is related to: NINscope
DOI:10.7554/elife.49987 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/ninscope/ SCR_021583 2026-09-05 06:29:42 0
OpenMV
 
Resource Report
Resource Website
OpenMV (RRID:SCR_021615) software resource Software tool as part of OpenMV system. OpenMV system, OpenBehavior is listed by: OpenBehavior
is related to: OpenMV project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/openmv/ SCR_021615 2026-09-05 06:29:43 0
pyControl
 
Resource Report
Resource Website
1+ mentions
pyControl (RRID:SCR_021612) software resource Open source software Python tool for behavioural experiment control. Part of pyControl system. Software resource, OpenBehavior is listed by: OpenBehavior
is related to: pyControl project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pycontrol/ SCR_021612 2026-09-05 06:29:43 7
NINscope
 
Resource Report
Resource Website
NINscope (RRID:SCR_021577) data or information resource, instrument resource, portal, project portal Portal provides miniscope for fluorescence imaging and optogenetic stimulation. Used for monitoring of neural signals during unrestrained behavior. Instrument, miniaturized fluorescent microscope, miniscope, monitoring of neural signals, unrestrained behavior, OpenBehavior is listed by: OpenBehavior
is related to: NINscope software
DOI:10.7554/elife.49987 Free, Freely available SCR_021577 2026-09-05 06:29:42 0
3D Printed Headcap and Microdrive
 
Resource Report
Resource Website
3D Printed Headcap and Microdrive (RRID:SCR_021595) data or information resource, instrument resource, portal, project portal Portal provides novel head cap and microdrive design for chronic multi electrode recordings in rats through use of 3D printing technology. Head cap and microdrive designs can be fabricated at little cost using consumer grade 3D printers. Instrument, head cap, microdrive, chronic multi electrode recordings, rat, 3D printing OpenBehavior is listed by: OpenBehavior DOI:10.1152/jn.00955.2014 Free, Freely available SCR_021595 2026-09-05 06:29:43 0
A Head Mounted Multi Camera System for Freely Moving Mice project
 
Resource Report
Resource Website
A Head Mounted Multi Camera System for Freely Moving Mice project (RRID:SCR_021591) data or information resource, instrument resource, portal, project portal Portal provides system of two multi camera head mounts for mice in order to record physiological changes in certain behaviors. System used for video tracking of rodents behavior. Instrument, multi camera head mounts, mice head mounts, record physiological changes, OpenBehavior is listed by: OpenBehavior DOI:10.3389/fnins.2020.592417 Free, Freely available SCR_021591 A Head Mounted Multi Camera System for Freely Moving Mice 2026-09-05 06:29:42 0
Microwave based Homecage Motion Detector project
 
Resource Report
Resource Website
Microwave based Homecage Motion Detector project (RRID:SCR_021590) data or information resource, instrument resource, portal, project portal Portal provides radar based motion detector for home cage activity monitoring in mice. System is used for motion detection without visual contact to animal and can be used with various cage types. Features custom printed circuit board and motion detector shield for Arduino, which saves raw activity and timestamped data in CSV files onto SD card.Developed by Max Planck Institute of Psychiatry scientists. Authors also provide Python script for data analysis and generation of actograms. Instrument, Homecage Motion Detector, OpenBehavior is listed by: OpenBehavior
has parent organization: Max-Planck-Gesellschaft
DOI:10.1186/s13036-017-0079-y Free, Freely available SCR_021590 Microwave based Homecage Motion Detector 2026-09-05 06:29:42 0
Open Ephys
 
Resource Report
Resource Website
1+ mentions
Open Ephys (RRID:SCR_021624) nonprofit organization Organization mission is to advance understanding of brain by promoting community ownership of neuroscience tools.Collaborative effort to develop, document, and distribute open source tools for systems neuroscience.Project aims to distribute reliable open source software as well as tools for extracellular recording and stimulation. develop open source tools, distribute open source tools, neuroscience tools, OpenBehavior is listed by: OpenBehavior DOI:10.1088/1741-2552/aa651f SCR_021624 Open Ephys 2026-09-05 06:29:43 9
An Opensource lickometer and microstructure analysis program
 
Resource Report
Resource Website
An Opensource lickometer and microstructure analysis program (RRID:SCR_021589) data or information resource, instrument resource, portal, project portal Portal provides open source lickometer that utilizes readily available or customizable components such as PC sound card and 3D printed drinking bottle holder. System consists of apparatus itself and open source software to collect and analyze data. Recording of raw data is handled by Audacity, open source audio program. Instrument, ingestion behaviors in rodents, lickometer, OpenBehavior is listed by: OpenBehavior DOI:10.1016/j.ohx.2018.e00035 Free, Freely available SCR_021589 2026-09-05 06:29:42 0
PRiED
 
Resource Report
Resource Website
PRiED (RRID:SCR_021586) data or information resource, instrument resource, portal, project portal Portal provides open Source 3-D Printed Modular micro drive system for acute primate neurophysiology. Instrument, 3D Printed Modular micro drive system, acute primate neurophysiology, OpenBehavior is listed by: OpenBehavior
has parent organization: Boston University School of Medicine; Massachusetts; USA
DOI:10.1371/journal.pone.0094262 Free, Freely available SCR_021586 2026-09-05 06:29:42 0
Modular Automated Platform for Large Scale Experiments project
 
Resource Report
Resource Website
10+ mentions
Modular Automated Platform for Large Scale Experiments project (RRID:SCR_021557) MAPLE data or information resource, instrument resource, portal, project portal Portal related to measurement of fly social networks and behavior. Provides Drosophila handing robot that boasts modular design, allowing platform to both automate diverse phenotyping assays and aid with lab chores (e.g., collecting virgin female flies). MAPLE permits small part manipulator, USB digital camera, and fly manipulator to work simultaneously over platform of flies. Instrument, Drosophila handing robot, automate diverse phenotyping assays, collecting virgin female flies, USB digital camera, fly manipulator, flies modular automated platform, large scale experiments, OpenBehavior is listed by: OpenBehavior
is related to: Modular Automated Platform for Large Scale Experiments
DOI:10.1101/239459 Free, Freely available SCR_021557 Modular Automated Platform for Large -Scale Experiments 2026-09-05 06:29:42 49
ArControl project
 
Resource Report
Resource Website
ArControl project (RRID:SCR_021556) data or information resource, instrument resource, portal, project portal Portal related to delivering stimuli and monitoring responses. Provided behavioral platform was developed by scientists from Huazhong University of Science and Technology, Wuhan, China. System uses Arduino UNO board and simple drive circuit along with stand-along GUI application. Experimental data is automatically recorded with built-in data acquisition function and entire behavioral schedule is stored within Arduino chip. Instrument, behavioral platform, delivering stimuli, monitoring responses, OpenBehavior is listed by: OpenBehavior
is related to: ArControl
DOI:10.3389/fnbeh.2017.00244 Free, Freely available SCR_021556 ArtControl, Arduino Control Platform 2026-09-05 06:29:42 0

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