Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Related Resources:debian (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

2,279 Results - per page

Show More Columns | Download Top 1000 Results

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
T3DB
 
Resource Report
Resource Website
10+ mentions
T3DB (RRID:SCR_002672) T3DB data or information resource, database Database that combines detailed toxin data with comprehensive toxin target information. The database currently houses 3,053 toxins described by 32,276 synonyms, including pollutants, pesticides, drugs, and food toxins, which are linked to 1,670 corresponding toxin target records. Altogether there are 37,084 toxin, toxin target associations. (March 2014) Each toxin record (ToxCard) contains over 50 data fields and holds information such as chemical properties and descriptors, toxicity values, molecular and cellular interactions, and medical information. This information has been extracted from over 5,454 sources sources, which include other databases, government documents, books, and scientific literature. The focus of the T3DB is on providing mechanisms of toxicity and target proteins for each toxin. This dual nature of the T3DB, in which toxin and toxin target records are interactively linked in both directions, makes it unique from existing databases. It is also fully searchable and supports extensive text, sequence, chemical structure, and relational query searches toxicology, toxin, pollutant, pesticide, drug, food, gene-drug, interaction, gene, phenotype, mechanism, bio.tools is used by: NIF Data Federation
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is related to: FMA
has parent organization: University of Alberta; Alberta; Canada
Alberta Advanced Education and Technology ;
Canadian Institutes of Health Research ;
Genome Alberta ;
Genome Canada
PMID:19897546 Free, Available for download, Freely available r3d100012189, nif-0000-22933, biotools:t3db, OMICS_01592 https://bio.tools/t3db, https://doi.org/10.17616/R3VM0R SCR_002672 Toxin-Target Database, Toxin Toxin-Target Database, Toxin and Toxin Target Database, Toxin, Toxin Toxin Target Database 2026-08-01 12:09:11 24
HINT
 
Resource Report
Resource Website
100+ mentions
HINT (RRID:SCR_002762) HINT data or information resource, database A database of high-quality protein-protein interactions in different organisms. protein-protein interaction, bio.tools, FASEB list is used by: Mutation Annotation and Genomic Interpretation
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Cornell University; New York; USA
PMID:22846459 Free, Freely available, Available for download OMICS_02898, biotools:hint https://bio.tools/hint SCR_002762 High-quality INTeractomes 2026-08-01 12:09:07 306
Entrez Gene
 
Resource Report
Resource Website
1000+ mentions
Entrez Gene (RRID:SCR_002473) NCBI_Gene, NCBI Genen NCBI Entrez data or information resource, database Database for genomes that have been completely sequenced, have active research community to contribute gene-specific information, or that are scheduled for intense sequence analysis. Includes nomenclature, map location, gene products and their attributes, markers, phenotypes, and links to citations, sequences, variation details, maps, expression, homologs, protein domains and external databases. All entries follow NCBI's format for data collections. Content of Entrez Gene represents result of curation and automated integration of data from NCBI's Reference Sequence project (RefSeq), from collaborating model organism databases, and from many other databases available from NCBI. Records are assigned unique, stable and tracked integers as identifiers. Content is updated as new information becomes available. gene, gene expression, gene location, gene map, gene prediction, genome, genome sequence analysis, phenotype, nomenclature, gene mapping, protein, genetic code, function, annotation, gold standard, bio.tools is used by: Animal QTLdb
is used by: NIF Data Federation
is used by: LIPID MAPS Proteome Database
is used by: DisGeNET
is used by: Nowomics
is used by: Cytokine Registry
is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition
is used by: Vesiclepedia
is listed by: OMICtools
is listed by: re3data.org
is listed by: bio.tools
is listed by: Debian
is related to: Rat Gene Symbol Tracker
is related to: Gene Reference into Function
is related to: Integrated Molecular Interaction Database
is related to: Biomine
is related to: SEGS
is related to: STOP
is related to: Coremine Medical
is related to: Consensus CDS
is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit
is related to: Array Information Library Universal Navigator
is related to: biomaRt
has parent organization: NCBI
works with: Open Regulatory Annotation Database
PMID:17148475
PMID:21115458
Free, Freely available nif-0000-02801, biotools:entrez_gene, OMICS_01651, r3d100010650 http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene, http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene, https://bio.tools/entrez_gene, https://doi.org/10.17616/R3603S SCR_002473 NCBI Gene, Gene - Gene mapped phenotypes, Gene - Gene and mapped phenotypes, Gene Database, GeneID 2026-08-01 12:09:06 2830
DBTSS: Database of Transcriptional Start Sites
 
Resource Report
Resource Website
100+ mentions
DBTSS: Database of Transcriptional Start Sites (RRID:SCR_002354) DBTSS data or information resource, database Database of transcriptional start sites (TSSs) representing exact positions in the genome based on a unique experimentally validated TSS sequencing method, TSS Seq. A major part of human adult and embryonic tissues are covered. DBTSS contains 491 million TSS tag sequences collected from a total of 20 tissues and 7 cell cultures. Also integrated is generated RNA-seq data of subcellular- fractionated RNAs and ChIP Seq data of histone modifications, RNA polymerase II and several transcriptional regulatory factors in cultured cell lines. Also included is external epigenomic data, such as chromatin map of the ENCODE project. They associated those TSS information with public and original SNV data, in order to identify single nucleotide variations (SNVs) in the regulatory regions. cdna, cdna library, transcriptional start site, transcriptome, transcriptome analysis, tss-seq, genome, adult human, embryonic, cell, rna-seq, subcellular, rna, chip seq data, histone modification, rna polymerase ii, transcriptional regulatory factor, cell line, single nucleotide variation, regulatory region, genetic valuation, transcriptional regulation, bio.tools, FASEB list is used by: Transcriptional Regulatory Element Database
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: University of Tokyo; Tokyo; Japan
Japan Society for the Promotion of Science ;
Japanese Ministry of Education Culture Sports Science and Technology MEXT
PMID:22086958
PMID:19910371
PMID:17942421
PMID:16381981
PMID:14681363
PMID:11752328
nif-0000-02738, biotools:dbtss, OMICS_01860 https://bio.tools/dbtss SCR_002354 DBTSS: Database of Transcriptional Start Sites, DataBase of Transcriptional Start Sites 2026-08-01 12:09:05 124
RESID
 
Resource Report
Resource Website
10+ mentions
RESID (RRID:SCR_003505) RESID data or information resource, database A comprehensive collection of annotations and structures for protein modifications including amino-terminal, carboxyl-terminal and peptide chain cross-link post-translational modifications. It provides: systematic and alternate names, atomic formulas and masses, enzyme activities generating the modifications, keywords, literature citations, Gene Ontology cross-references, Protein Information Resource (PIR) and SWISS-PROT protein sequence database feature table annotations, structure diagrams and molecular models. Each RESID Database entry presents a chemically unique modification and shows how that modification is currently annotated in the protein sequence databases, Swiss-Prot and the Protein Information Resource (PIR). The RESID Database provides a table of corresponding equivalent feature annotations that is used in the UniProt project, an international effort to combine the resources of the Swiss-Prot, TrEMBL and PIR. As an annotation tool, the RESID Database is used in standardizing and enhancing modification descriptions in the feature tables of Swiss-Prot entries. protein cross-link, protein modification, protein structure, protein, structure, annotation, amino-terminal, carboxyl-terminal, peptide chain cross-link, post-translational modification, gold standard, bio.tools is listed by: bio.tools
is listed by: Debian
PMID:15174122
PMID:12520062
nif-0000-03400, r3d100000023, biotools:resid https://bio.tools/resid, https://doi.org/10.17616/R3Z59M http://www.ebi.ac.uk/RESID/ SCR_003505 RESID Database at the EBI, RESID Database at PIR, RESID Database of Protein Modifications, RESID Database 2026-08-01 12:09:15 10
CODEHOP
 
Resource Report
Resource Website
50+ mentions
CODEHOP (RRID:SCR_002898) CODEHOP data analysis service, service resource, production service resource, analysis service resource THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone.Service to design PCR primers from protein multiple sequence alignments. NOTICE: This version of CODEHOP is no longer maintained. degenerate, primer, primer design, degenerate primer, oligonucleotide, pcr assay, gene, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Fred Hutchinson Cancer Center
PMID:20967601 THIS RESOURCE IS NO LONGER IN SERVICE biotools:codehop, OMICS_02339 https://bio.tools/codehop SCR_002898 COnsensus-DEgenerate Hybrid Oligonucleotide Primers, CODEHOP: COnsensus-DEgenerate Hybrid Oligonucleotide Primers 2026-08-01 12:09:17 75
GeneFisher
 
Resource Report
Resource Website
10+ mentions
GeneFisher (RRID:SCR_003060) GeneFisher, GeneFisher2 data analysis service, service resource, production service resource, analysis service resource A web-based program for designing degenerate primers. The procedure leads to isolation of genes in a target organism using multiple alignments of related genes from different organisms. The term gene fishing refers to the technique where PCR is used to isolate a postulated but unknown target sequence from a pool of DNA. primer design, gene, degenerate primer, degenerate, primer, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Bielefeld University; North Rhine-Westphalia; Germany
PMID:8877506 Free, Freely available biotools:genefisher, OMICS_02341 https://bio.tools/genefisher SCR_003060 GeneFisher2 - Interactive PCR Primer Design 2026-08-01 12:09:18 37
IPI
 
Resource Report
Resource Website
50+ mentions
IPI (RRID:SCR_003012) IPI data or information resource, database IPI provides a top level guide to the main databases (UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, RefSeq, Ensembl, TAIR, H-InvDB, Vega) that describe the proteomes of higher eukaryotic organisms. IPI: :1. effectively maintains a database of cross references between the primary data sources :2. provides minimally redundant yet maximally complete sets of proteins for featured species (one sequence per transcript) :3. maintains stable identifiers (with incremental versioning) to allow the tracking of sequences in IPI between IPI releases. IPI is updated monthly in accordance with the latest data released by the primary data sources. As previously announced, the closure of IPI has been proposed for some time. Replacement data sets are now available through UniProt for human and mouse; sets for the other species contained within IPI are expected to be included as part of the UniProt release 2011_07. To allow users time to transition to using the new UniProt data sets, IPI releases will continue to be produced throughout the summer. The final release will be made in September 2011. Thereafter, the IPI website will cease to be maintained, although previous releases of the dataset will continue to be available from the FTP site. We would like to thank our users for their support and interest in this service. human, mouse, rat, zebrafish, arabidopsis, chicken, cow, bio.tools is listed by: bio.tools
is listed by: Debian
is related to: UniProt DAS
has parent organization: European Bioinformatics Institute
works with: PremierBiosoft Proteo IQ Software
PMID:15221759 THIS RESOURCE IS NO LONGER IN SERVICE biotools:ipi, nif-0000-03043 https://bio.tools/ipi SCR_003012 International Protein Index, IPI - International Protein Index 2026-08-01 12:09:18 76
IPD - Immuno Polymorphism Database
 
Resource Report
Resource Website
10+ mentions
IPD - Immuno Polymorphism Database (RRID:SCR_003004) IPD data or information resource, database A set of specialist databases related to the study of polymorphic genes in the immune system. The IPD project works with specialist groups or nomenclature committees who provide and curate individual sections before they are submitted to IPD for online publication. The IPD project stores all the data in a set of related databases. IPD currently consists of four databases: * IPD-KIR, contains the allelic sequences of Killer-cell Immunoglobulin-like Receptors, * IPD-MHC, is a database of sequences of the Major Histocompatibility Complex of different species; * IPD-human platelet antigens, alloantigens expressed only on platelets and * IPD-ESTDAB, which provides access to the European Searchable Tumour cell-line database, a cell bank of immunologically characterized melanoma cell lines. polymorphic gene, immune system, gene, gold standard, bio.tools is listed by: bio.tools
is listed by: Debian
has parent organization: European Bioinformatics Institute
European Union contract QLRI-CT-200!-01325;
NCI P01 111412
PMID:19875415
PMID:18449992
PMID:15608253
biotools:ipd, nif-0000-03038, r3d100010797 https://bio.tools/ipd, https://doi.org/10.17616/R3KK7K SCR_003004 IPD-The Immuno Polymorphism Database, IPD - The Immuno Polymorphism Database 2026-08-01 12:09:13 24
e-PCR
 
Resource Report
Resource Website
10+ mentions
e-PCR (RRID:SCR_003082) e-PCR data analysis service, service resource, production service resource, analysis service resource Web tool that identifies sequence tagged sites (STSs) within DNA sequences. Using e-PCR, you can search for sub-sequences that closely match the PCR primers and have the correct order, orientation, and spacing. The software may also be downloaded to run locally. sequence tagged site, dna sequence, reverse, forward is listed by: OMICtools
is listed by: Debian
has parent organization: NCBI
PMID:15215361
PMID:9149949
THIS RESOURCE IS NO LONGER IN SERVICE OMICS_02345 https://sources.debian.org/src/ncbi-epcr/ http://www.ncbi.nlm.nih.gov/sutils/e-pcr SCR_003082 Electronic PCR, Electronic PCR (e-PCR) 2026-08-01 12:09:09 12
ResponseNet
 
Resource Report
Resource Website
1+ mentions
ResponseNet (RRID:SCR_003176) ResponseNet data analysis service, service resource, production service resource, analysis service resource WebServer that identifies high-probability signaling and regulatory paths that connect input data sets. The input includes two weighted lists of condition-related proteins and genes, such as a set of disease-associated proteins and a set of differentially expressed disease genes, and a molecular interaction network (i.e., interactome). The output is a sparse, high-probability interactome sub-network connecting the two sets that is biased toward signaling pathways. This sub-network exposes additional proteins that are potentially involved in the studied condition and their likely modes of action. Computationally, it is formulated as a minimum-cost flow optimization problem that is solved using linear programming. interactome, gene, protein, signaling pathway, signaling, regulatory, pathway, regulatory pathway, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Ben-Gurion University of the Negev; Beer-Sheva; Israel
PMID:23761447
PMID:21576238
Free, Freely available biotools:responsenet, OMICS_01562 https://bio.tools/responsenet http://netbio.bgu.ac.il/respnet/ SCR_003176 2026-08-01 12:09:19 4
IntEnz- Integrated relational Enzyme database
 
Resource Report
Resource Website
10+ mentions
IntEnz- Integrated relational Enzyme database (RRID:SCR_002992) IntEnz data or information resource, database IntEnz (Integrated relational Enzyme database) is a freely available resource focused on enzyme nomenclature. IntEnz is created in collaboration with the Swiss Institute of Bioinformatics (SIB). This collaboration is responsible for the production of the ENZYME resource. IntEnz contains the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB) on the nomenclature and classification of enzyme-catalysed reactions. enzyme categories, enzyme classification, enzyme nomenclature, enzyme reaction categories, enzyme, gold standard, bio.tools is listed by: bio.tools
is listed by: Debian
is related to: ENZYME
has parent organization: European Bioinformatics Institute
has parent organization: SIB Swiss Institute of Bioinformatics
European Union SLING 226073 PMID:14681451 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-03028, biotools:intenz, r3d100010803 https://bio.tools/intenz SCR_002992 2026-08-01 12:09:13 13
SAM
 
Resource Report
Resource Website
100+ mentions
SAM (RRID:SCR_010951) software resource Software for genomic expression data mining using a statistical technique for finding significant genes in a set of microarray experiments. genomic expression, data mining, finding significant genes, microarray experiments, is listed by: OMICtools
is listed by: Debian
is listed by: SoftCite
is related to: pysam
has parent organization: Stanford University; Stanford; California
Commercial use requires license, Registration required OMICS_01314, OMICS_00779, SCR_011888 https://sources.debian.org/src/r-cran-samr/ SCR_010951 SAM: Significance Analysis of Microarrays, Significance Analysis of Microarrays 2026-08-01 12:12:03 235
FusionHunter
 
Resource Report
Resource Website
1+ mentions
FusionHunter (RRID:SCR_011895) FusionHunter source code, software resource Software for identifying fusion transcripts using paired-end RNA-seq. perl, annotation, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
OMICS_01350, biotools:fusionhunter https://bio.tools/fusionhunter SCR_011895 FusionHunter: identifying fusion transcripts using paired-end RNA-seq 2026-08-01 12:12:07 8
lsa_slurm
 
Resource Report
Resource Website
1+ mentions
lsa_slurm (RRID:SCR_018134) source code, software resource Software tool to implement pre-assembly binning scheme leveraging sparse dictionary learning and matrix factorization to solve sparse decomposition problems arising in field of metagenomics. Sparse dictionary learning, pre-assembly binning scheme, matrix factorization, sparse decomposition, metagenomic, bio.tools is listed by: bio.tools
is listed by: Debian
Free, Available for download, Freely available biotools:Metagenomic_read_binning_using_sparse_coding https://bio.tools/Metagenomic_read_binning_using_sparse_coding SCR_018134 Metagenomic_read_binning_using_sparse_coding 2026-08-01 12:12:43 1
OmicsOffice for NGS SeqSolve
 
Resource Report
Resource Website
OmicsOffice for NGS SeqSolve (RRID:SCR_001222) OmicsOffice for NGS commercial organization, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 18,2025. Software for secondary and tertiary analysis of Next Generation Sequencing (NGS) data. next-generation sequencing, rna-seq, chip-seq, transcript, alternative splicing, variant, mirna, non-coding rna expression, genome, differential expression, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
PMID:20671709 THIS RESOURCE IS NO LONGER IN SERVICE biotools:seqsolve, OMICS_02111 https://bio.tools/seqsolve SCR_001222 OmicsOffice for NGS (SeqSolve), SeqSolve 2026-08-01 12:11:30 0
ZOOM
 
Resource Report
Resource Website
100+ mentions
ZOOM (RRID:SCR_002175) ZOOM commercial organization, software resource Software to map the Illumina/Solexa reads of 15x coverage of a human genome to the reference human genome in one CPU-day, allowing two mismatches, at full sensitivity. next-generation sequencing, illumina, solexa, reference genome, bio.tools is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
PMID:18684737 THIS RESOURCE IS NO LONGER IN SERVICE OMICS_01852, biotools:zoom https://bio.tools/zoom SCR_002175 ZOOM: Next Gen Sequencing 2026-08-01 12:11:27 278
Segway - a way to segment the genome
 
Resource Report
Resource Website
1+ mentions
Segway - a way to segment the genome (RRID:SCR_004206) source code, software resource The free Segway software package contains a novel method for analyzing multiple tracks of functional genomics data. The method uses a dynamic Bayesian network (DBN) model, which enables it to analyze the entire genome at 1-bp resolution even in the face of heterogeneous patterns of missing data. This method is the first application of DBN techniques to genome-scale data and the first genomic segmentation method designed for use with the maximum resolution data available from ChIP-seq experiments without downsampling. Segway uses the Graphical Models Toolkit (GMTK) for efficient DBN inference. The software has extensive documentation and was designed from the outset with external users in mind. genome annotation, source code, bayesian network model, bayesian, chip seq, dbn, bio.tools is used by: ENCODE
is listed by: Debian
is listed by: bio.tools
has parent organization: University of Washington; Seattle; USA
has parent organization: University of Toronto; Ontario; Canada
PMID:22426492 Free nlx_22911, biotools:segway https://www.pmgenomics.ca/hoffmanlab/proj/segway/, https://bitbucket.org/hoffmanlab/segway/, https://bio.tools/segway http://noble.gs.washington.edu/proj/segway/ SCR_004206 Segway 2026-08-01 12:11:29 8
Picard
 
Resource Report
Resource Website
10000+ mentions
Rating or validation data
Picard (RRID:SCR_006525) source code, software toolkit, software resource Java toolset for working with next generation sequencing data in the BAM format. next generation sequencing, java, bam is listed by: OMICtools
is listed by: Debian
is listed by: SoftCite
has parent organization: SourceForge
has parent organization: Broad Institute
is required by: SL-quant
Available for download, Free OMICS_01066 http://sourceforge.net/projects/picard/, https://github.com/broadinstitute/picard, https://sources.debian.org/src/picard-tools/ SCR_006525 2026-08-01 12:11:47 14139
Biopieces
 
Resource Report
Resource Website
10+ mentions
Biopieces (RRID:SCR_005783) Biopieces source code, software toolkit, software resource A collection of bioinformatics tools that can be pieced together in a very easy and flexible manner to perform both simple and complex tasks. The Biopieces work on a data stream in such a way that the data stream can be passed through several different Biopieces, each performing one specific task: modifying or adding records to the data stream, creating plots, or uploading data to databases and web services. The Biopieces are executed in a command line environment where the data stream is initialized by specific Biopieces which read data from files, databases, or web services, and output records to the data stream that is passed to downstream Biopieces until the data stream is terminated at the end of the analysis. The advantage of the Biopieces is that a user can easily solve simple and complex tasks without having any programming experience. Moreover, since the data format used to pass data between Biopieces is text based, different developers can quickly create new Biopieces in their favorite programming language - and all the Biopieces will maintain compatibility. Finally, templates exist for creating new Biopieces in Perl and Ruby. There are currently ~190 Biopieces (March 2014). bioinformatics, tool, framework, biopieces, language independent, bio.tools, FASEB list is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
has parent organization: Google Project Hosting
Danish Agency for Science Technology and Innovation 272-06-0325 GNU General Public License, v2 nlx_149253, biotools:biopieces, OMICS_01036 http://code.google.com/p/biopieces/, https://bio.tools/biopieces SCR_005783 www.biopieces.org, biopieces - Biopieces is a bioinformatic framework of tools easily used and easily created 2026-08-01 12:11:30 40

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. NIDDK Information Network Resources

    Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.