Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Genetic Insert: sgRNA scaffold
Vector Backbone Description: Backbone Marker:Feng Zhang; Backbone Size:2880; Vector Backbone:PX551-Plasmid #60957; Vector Types:Mammalian Expression, Mouse Targeting, AAV, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:30231914
Proper citation: RRID:Addgene_112139 Copy
Species: Homo sapiens
Genetic Insert: PRM-5R
Vector Backbone Description: Backbone Marker:NEB; Backbone Size:6600; Vector Backbone:pMal-tev; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:22398450
Proper citation: RRID:Addgene_112088 Copy
Species: Homo sapiens
Genetic Insert: Abl-PRM-4R
Vector Backbone Description: Backbone Marker:NEB; Backbone Size:6600; Vector Backbone:pMal-tev; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:22398450
Proper citation: RRID:Addgene_112087 Copy
Species: Homo sapiens
Genetic Insert: KRAB
Vector Backbone Description: Backbone Marker:ThermoFisher; Backbone Size:5407; Vector Backbone:pcDNA3.3-TOPO; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:28973434
Proper citation: RRID:Addgene_112195 Copy
Species: Other
Genetic Insert: Super-folder GFP
Vector Backbone Description: Vector Backbone:pMTB; Vector Types:Zebrafish Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29700229
Proper citation: RRID:Addgene_112225 Copy
Species: Mus musculus
Genetic Insert: (Arkadia)Rnf111
Vector Backbone Description: Backbone Marker:Novagen; Vector Backbone:pTriEx2-hygro; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:17341133
Comments: The GFP tagged Arkadia constructs were generated by eliminating the first 9 aa of Arkadia and fusing in frame to GFP Sequences and cloned into SmaI/XhoI of the pTriEx2-hygro (Novagen, http://www.novagen.com) vector.
Proper citation: RRID:Addgene_112228 Copy
Species: Ideonella sakaiensis
Genetic Insert: PETase gene from Ideonella sakaiensis 201-F6, codon optimized for expression in E. coli K12
Vector Backbone Description: Backbone Marker:Novagen/Millipore Sigma; Backbone Size:5367; Vector Backbone:pET-21b(+); Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29666242
Proper citation: RRID:Addgene_112202 Copy
Species: Homo sapiens
Genetic Insert: EYFP-YAP1
Vector Backbone Description: Backbone Size:7484; Vector Backbone:pLentilox3.7; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29909276
Comments: The human YAP1-2gamma isoform, which is 504 amino acids long is described in (Gaffney et al., 2012)
Proper citation: RRID:Addgene_112289 Copy
Vector Backbone Description: Backbone Marker:Sylvestre Marillonnet (Addgene plasmid # 48015); Vector Backbone:pAGM4723; Vector Types:Golden Gate assembly; Bacterial Resistance:Kanamycin
Defining Citation: PMID:37278403
Comments: L2 empty backbone for golden gate assembly (Bpi) to diatoms.
This is a shorter backbone to improve transformation and cloning for systems that do not need the Agrobacterium T-DNA delivery.
The colonies are red due to the canthaxanthin operon. Successful insertion cut out the canthaxanthin operon and lead to white colonies.
Proper citation: RRID:Addgene_112207 Copy
Species: Synthetic
Genetic Insert: SpyCatcher-mi3
Vector Backbone Description: Backbone Marker:Novagen; Backbone Size:5369; Vector Backbone:pET28a; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:30028591
Proper citation: RRID:Addgene_112255 Copy
Genetic Insert: E2F1RE (responsive element)
Vector Backbone Description: Vector Backbone:pGreenFire1; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_112248 Copy
Species: Homo sapiens
Genetic Insert: IRS-1
Vector Backbone Description: Backbone Size:7583; Vector Backbone:pCMV histidinol; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:10958681
Comments: pCMV human IRS-1 was cut with ApaLI and SalI. A 5' IRS-1 oligo at bp4746 (amino acid 1242) and 3'IRS-1 oligo with 3' IRS-1 sequence fused to the p21ras CAAX prenylation motif (CMSCKCVLS) were used for PCR and the insert was ligated into pCMV human IRS-1. Select cells expressing plasmid with approximately 5mM histidinol (Sigma), depending on the cell type.
Proper citation: RRID:Addgene_11238 Copy
Species: Homo sapiens
Genetic Insert: TFE3 homology arms flanking EGFP-IRES-Neo cassette
Vector Backbone Description: Vector Backbone:pUC19; Vector Types:CRISPR; Bacterial Resistance:Ampicillin
Comments: Cloning source: K562. Use with plasmid pTFE3.1.0-gDNA.
Proper citation: RRID:Addgene_112377 Copy
Species: Homo sapiens
Genetic Insert: TFE3
Vector Backbone Description: Backbone Marker:Zhang lab (Addgene plasmid ID: 42230); Vector Backbone:pX330; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Comments: gRNA sequence listed includes 20 nucleotide target sequence, followed by the uncloned PAM sequence. The PAM sequence is not present in the plasmid. Use with plasmid pTFE3-donor.
Proper citation: RRID:Addgene_112473 Copy
Species: Adenovirus
Genetic Insert: AdML-M3
Vector Backbone Description: Backbone Marker:Promega; Backbone Size:2500; Vector Backbone:pSP72; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:12215496
Comments: Reed lab clone #388.
Proper citation: RRID:Addgene_11244 Copy
Species: Homo sapiens
Genetic Insert: CUX1
Vector Backbone Description: Backbone Marker:Zhang lab (Addgene plasmid ID: 42230); Vector Backbone:pX330; Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Comments: gRNA sequence listed includes 20 nucleotide target sequence, followed by the uncloned PAM sequence. The PAM sequence is not present in the plasmid. Use with plasmid pCUX1-donor.
Proper citation: RRID:Addgene_112434 Copy
Vector Backbone Description: Vector Backbone:pBAT4; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:8660525
Proper citation: RRID:Addgene_112592 Copy
Species: Synthetic
Genetic Insert: ProD gfpmut3 TT
Vector Backbone Description: Vector Backbone:pFPV25.1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:29201859
Proper citation: RRID:Addgene_112518 Copy
Vector Backbone Description: Vector Backbone:pGEMEX1; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:8660525
Proper citation: RRID:Addgene_112580 Copy
Species: Homo sapiens
Genetic Insert: cathepsin B
Vector Backbone Description: Backbone Marker:Invitrogen; Backbone Size:5428; Vector Backbone:pcDNA3.1(-); Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:16339146
Comments: See author's map for more information.
Proper citation: RRID:Addgene_11249 Copy
Can't find your Plasmid?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific plasmid, it's easier to enter an RRID or an Addgene Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your plasmid in the search results, please help us by registering it into the system — it's easy. Register it with Addgene.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within dkNET that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
