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URL: https://dx.doi.org/10.17504/protocols.io.h4vb8w6

Authors: Josephine Bwogi1, 2, Khuzwayo C. Jere3, 4 , Charles Karamagi2, Denis K. Byarugaba5, Prossy Namuwulya1, Frederick N. Baliraine6 , Ulrich Desselberger7 , Miren Iturriza-Gomara3.

Associated Publications: Bwogi J, Jere KC, Karamagi C, Byarugaba DK, Namuwulya P, Baliraine FN, Desselberger U, Iturriza-Gomara M (2017) Whole genome analysis of selected human and animal rotaviruses identified in Uganda from 2012 to 2014 reveals complex genome reassortment events between human, bovine, caprine and porcine strains. PLoS ONE 12(6): e0178855. doi: 10.1371/journal.pone.0178855

Affiliations: 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected], 1 EPI laboratory, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda 2Department of Paediatrics and Child Health, College of Health Sciences, Makerere University, P.O. BOX 7072, Kampala Uganda 3 Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK 4 Malawi-Liverpool-Wellcome Trust Clinical Research Programme / Department of Medical Laboratory Sciences, University of Malawi, College of Medicine, Blantyre, Malawi 5 Department of Microbiology, College of Veterinary Medicine and Biosecurity, Makerere University, P.O.BOX 7072, Kampala, Uganda 6Department of Biology and Kinesiology, LeTourneau University, Longview, Texas, USA 7Department of Medicine, University of Cambridge, Cambridge, UK *Corresponding author: Josephine Bwogi, Uganda Virus Research Institute, 51-59 Nakiwogo Road, P.0.BOX 49, Entebbe, Uganda. Email: [email protected] or [email protected]

External URL: https://doi.org/10.1371/journal.pone.0178855

Version: 1

Publication Date: 2017

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