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Protocol Name
DOI:10.17504/protocols.io.g9gbz3w RRID Copied  
PDF Report How to cite
James Thornton Jr. 2017. Centrifuge Report of Normal vs Dermatitis Skin Microbiome. protocols.io dx.doi.org/10.17504/protocols.io.g9gbz3w
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Protocol Information

URL: https://dx.doi.org/10.17504/protocols.io.g9gbz3w

Authors: James Thornton Jr.

Group: Hurwitz Lab, iMicrobeOutreach

Summary: Centrifuge is a classification software used on whole genome shotgun (WGS) reads. It uses a reference database to determine what organisms are found in your sample. This protocol will show you how to access the data on CyVerse and walk you through some questions to help in the analysis of the plots. 

Affiliations: Hurwitz Lab

Version: 1

Publication Date: 2017

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Data and Source Information

Source: Protocols.io