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Resource Name
SNPSTATS
RRID:SCR_002142 RRID Copied      
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SNPSTATS (RRID:SCR_002142)
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Resource Information

URL: http://bioinfo.iconcologia.net/snpstats/

Proper Citation: SNPSTATS (RRID:SCR_002142)

Description: A web-based application designed from a genetic epidemiology point of view to analyze association studies using single nucleotide polymorphisms (SNPs). For each selected SNP, you will receive: * Allele and genotype frequencies * Test for Hardy-Weinberg equilibrium * Analysis of association with a response variable based on linear or logistic regression * Multiple inheritance models: co-dominant, dominant, recessive, over-dominant and additive * Analysis of interactions (gene-gene or gene-environment) If multiple SNPs are selected: * Linkage disequilibrium statistics * Haplotype frequency estimation * Analysis of association of haplotypes with the response * Analysis of interactions (haplotypes-covariate)

Abbreviations: SNPStats

Synonyms: SNP STATisticS

Resource Type: source code, analysis service resource, data analysis service, production service resource, service resource, software resource

Defining Citation: PMID:16720584

Keywords: gene, genetic, genomic, single nucleotide polymorphism, association study, genetic, epidemiology, allele, frequency, genotype, allele frequency, genotype frequency, hardy-weinberg equilibrium, linkage disequilibrium, haplotype frequency, haplotype, interaction, haplotypes-covariate, association, linear regression, logistic regression, inheritance model, co-dominant, dominant, recessive, over-dominant, additive, gene-gene, gene-environment

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