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| Name | Authors | DOI | Group |
Summary |
Associated Publications |
RRIDs used | ||||||
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PNGase F Protocol, Non-Denaturing Conditions Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cqivud | New England Biolabs (NEB) | This is a generic PNGase F protocol with non-denaturing reaction conditions. It is appropriate for both P0704 and P0708. Typical reaction conditions are below. | New England Biolabs | https://www.neb.com/protocols/2014/07/31/pngase-f-protocol | 1 | 2015 | New England Biolabs 2015. PNGase F Protocol, Non-Denaturing Conditions. protocols.io https://dx.doi.org/10.17504/protocols.io.cqivud | 2021-04-15 09:16:13 | ||
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BioBrick E0546 Destination Reaction Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cpmvk5 | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/1/01/01/digestion-protocol-e0546 | 1 | 2015 | New England Biolabs 2015. BioBrick E0546 Destination Reaction. protocols.io https://dx.doi.org/10.17504/protocols.io.cpmvk5 | 2021-04-15 09:16:17 | |||
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NEB 3X SDS Sample Loading Buffer Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.crcv2v | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/1/01/01/immunoprecipitation-using-protein-ag-magnetic-beads | 1 | 2015 | New England Biolabs 2015. NEB 3X SDS Sample Loading Buffer. protocols.io https://dx.doi.org/10.17504/protocols.io.crcv2v | 2021-04-15 09:16:29 | |||
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Quick Protocol for Monarch® Plasmid Miniprep Kit (NEB #T1010) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.nytdfwn | New England Biolabs (NEB) | This is the quick version of the Monarch® Plasmid DNA Miniprep Kit Protocol (NEB #T1010). For the full protocol, please click here. | New England Biolabs | https://www.neb.com/protocols/2015/12/08/quick-protocol-for-monarch-plasmid-miniprep-kit-t1010 | 2 | 2018 | New England Biolabs 2018. Quick Protocol for Monarch® Plasmid Miniprep Kit (NEB #T1010). protocols.io https://dx.doi.org/10.17504/protocols.io.nytdfwn | 2021-04-15 09:16:17 | ||
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FirstStrand with RT Reaction Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cjvun5 | New England Biolabs (NEB) | New England Biolabs | 1 | 2014 | New England Biolabs 2014. FirstStrand with RT Reaction. protocols.io https://dx.doi.org/10.17504/protocols.io.cjvun5 | 2021-04-15 09:16:29 | ||||
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Restriction Digest Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.isycefw | New England Biolabs (NEB) | The following is a "typical" restriction endonuclease reaction. Please see the "guidelines" tab below for the NEB tips on optimizing restriction digests. | NEB, Ipswich, MA | https://www.neb.com/protocols/2012/12/07/optimizing-restriction-endonuclease-reactions | 2 | 2018 | New England Biolabs 2018. Restriction Digest. protocols.io https://dx.doi.org/10.17504/protocols.io.isycefw | 2021-04-15 09:16:31 | ||
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First Strand cDNA Synthesis (M0368) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.chtt6m | New England Biolabs (NEB) | This protocol is for the "First Strand cDNA Synthesis Kit using ProtoScript II Reverse Transcriptase (M0368)". | New England Biolabs | https://www.neb.com/protocols/2012/10/03/first-strand-cdna-synthesis-kit-using-protoscript-ii-reverse-transcriptase-m0368 | 1 | 2014 | New England Biolabs 2014. First Strand cDNA Synthesis (M0368). protocols.io https://dx.doi.org/10.17504/protocols.io.chtt6m | 2021-04-15 09:16:41 | ||
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Dephosphorylation of 5´-ends of DNA using CIP (M0290) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.iqwcdxe | New England Biolabs (NEB) | Protocol for Dephosphorylation of 5´-ends of DNA using CIP in Restriction Enzyme Reaction. Uses the Calf Intestinal Alkaline Phosphatase (CIP - M0290) | New England Biolabs | https://www.neb.com/protocols/1/01/01/protocol-for-dephosphorylating-with-cip | 2 | 2017 | New England Biolabs 2017. Dephosphorylation of 5´-ends of DNA using CIP (M0290). protocols.io https://dx.doi.org/10.17504/protocols.io.iqwcdxe | 2021-04-15 09:16:23 | ||
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Mixture for M0493 Q5 PCR Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cjsund | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/2013/12/13/pcr-using-q5-high-fidelity-dna-polymerase-m0491 | 1 | 2015 | New England Biolabs 2015. Mixture for M0493 Q5 PCR. protocols.io https://dx.doi.org/10.17504/protocols.io.cjsund | 2021-04-15 09:16:22 | |||
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NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®) (NEB #E7650S/L) Resource Report Resource Website |
Isabel Gautreau | DOI:10.17504/protocols.io.bsy4nfyw | New England Biolabs (NEB), Coronavirus Method Development Community | This protocol is about the NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®). | New England Biolabs | https://www.neb.com/-/media/nebus/files/manuals/manuale7650.pdf?rev=f37be6e42b4f486f888f204b83907d3f&hash=69F40067B46B925A7D45F5A6D418095F | 2 | 2021 | Isabel Gautreau 2021. NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®) (NEB #E7650S/L). protocols.io https://dx.doi.org/10.17504/protocols.io.bsy4nfyw | 2021-04-15 09:16:50 | ||
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High Efficiency Transformation Protocol (C2987I) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.chht35 | New England Biolabs (NEB) | This is the correct protocol if you are using the C2987I cells. If you are using the C2987H cells, please refer to this protocol. | New England Biolabs | https://www.neb.com/protocols/1/01/01/high-efficiency-transformation-protocol-c2987 | 1 | 2014 | New England Biolabs 2014. High Efficiency Transformation Protocol (C2987I). protocols.io https://dx.doi.org/10.17504/protocols.io.chht35 | 2021-04-15 09:16:52 | ||
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Protocol for Exo-CIP™ Rapid PCR Cleanup (#E1050) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.8yahxse | New England Biolabs (NEB) | Exo-CIP™ Rapid PCR Cleanup KitRapidly degrade residual PCR primers and dephosphorylate excess dNTPs after amplificationReaction complete in 4 minutesThermolabile formulation can be heat inactivated in 1 minute at 80°CPCR product can be used directly in downstream applicationsCompatible with commonly-used reaction buffers | New England Biolabs | https://neb.com/protocols/2019/01/16/protocol-for-exo-ciprapid-pcr-cleanup-e1050 | 1 | 2020 | New England Biolabs 2020. Protocol for Exo-CIP™ Rapid PCR Cleanup (#E1050). protocols.io https://dx.doi.org/10.17504/protocols.io.8yahxse | 2021-04-15 09:16:28 | ||
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T4 DNA Ligase Reaction Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.irwcd7e | New England Biolabs (NEB) | This is the reaction for the "Ligation Protocol with T4 DNA Ligase" | New England Biolabs | https://www.neb.com/protocols/1/01/01/dna-ligation-with-t4-dna-ligase-m0202 | 2 | 2017 | New England Biolabs 2017. T4 DNA Ligase Reaction. protocols.io https://dx.doi.org/10.17504/protocols.io.irwcd7e | 2021-04-15 09:16:53 | ||
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Single-temp DD Reaction Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cjjukm | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/2014/05/07/double-digest-protocol-with-standard-restriction-enzymes | 1 | 2014 | New England Biolabs 2014. Single-temp DD Reaction. protocols.io https://dx.doi.org/10.17504/protocols.io.cjjukm | 2021-04-15 09:16:53 | |||
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NEBExpress MBP Fusion and Purification System (NEB #E8201) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.bfayjifw | New England Biolabs (NEB) | The NEBExpress MBP Fusion and Purification System takes advantage of the strong Ptac promoter and the translation initiation signals of maltose binding protein (MBP) to enhance solubility and expression levels of a desired protein inE. coli. The resulting product is an MBP fusion protein, which is then purified by affinity chromatography.ReliableE. coli expression: substantial yields (up to 100 mg/L)Fusion to MBP has been shown to enhance the solubility of proteins expressed inE. coli(1)Two-step purification: amylose elution followed by TEV Protease cleavage and Ni resin isolation results in a highly pure tag-free target proteinGentle elution with maltose; no detergents or harsh denaturants required | New England Biolabs | https://www.neb.com/protocols/2020/02/05/nebexpress-mbp-fusion-and-purification-system-quick-start-protocol-neb-e8201 | 1 | 2020 | New England Biolabs 2020. NEBExpress MBP Fusion and Purification System (NEB #E8201). protocols.io https://dx.doi.org/10.17504/protocols.io.bfayjifw | 2021-04-15 09:16:48 | ||
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Mixture for M0530 Phusion PCR Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cgztx5 | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/1/01/01/pcr-protocol-m0530 | 1 | 2015 | New England Biolabs 2015. Mixture for M0530 Phusion PCR. protocols.io https://dx.doi.org/10.17504/protocols.io.cgztx5 | 2021-04-15 09:16:31 | |||
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PCR Protocol for Phusion® High-Fidelity DNA Polymerase (M0530) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.irrcd56 | New England Biolabs (NEB) | This is the PCR protocol for Phusion® High-Fidelity DNA Polymerase (M0530) | New England Biolabs | https://www.neb.com/protocols/1/01/01/pcr-protocol-m0530 | 2 | 2017 | New England Biolabs 2017. PCR Protocol for Phusion® High-Fidelity DNA Polymerase (M0530). protocols.io https://dx.doi.org/10.17504/protocols.io.irrcd56 | 2021-04-15 09:16:55 | ||
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Protocol for use with NEBNext Poly(A) mRNA Magnetic Isolation Module (NEB #E7490) and NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (E7760, E7765) Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.tunenve | New England Biolabs (NEB) | The NEBNext Ultra II Directional RNA Library Prep Kit for Illumina contains the enzymes and buffers required to convert a broad range of input amounts of RNA into high quality directional (strand-specific) libraries for next-generation sequencing on the Illumina platform. The fast, user-friendly workflow has minimal hands-on time and is compatible with poly(A) mRNA enrichment and rRNA depletion methods. | New England Biolabs | 1 | 2018 | New England Biolabs 2018. Protocol for use with NEBNext Poly(A) mRNA Magnetic Isolation Module (NEB #E7490) and NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (E7760, E7765). protocols.io https://dx.doi.org/10.17504/protocols.io.tunenve | 2021-04-15 09:16:56 | |||
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PNGase F Non-Denaturing Mixture Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cqjvum | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/2014/07/31/pngase-f-protocol | 1 | 2015 | New England Biolabs 2015. PNGase F Non-Denaturing Mixture. protocols.io https://dx.doi.org/10.17504/protocols.io.cqjvum | 2021-04-15 09:16:37 | |||
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Mixture for M0491 Q5 PCR Resource Report Resource Website |
New England Biolabs | DOI:10.17504/protocols.io.cieubd | New England Biolabs (NEB) | New England Biolabs | https://www.neb.com/protocols/2013/12/13/pcr-using-q5-high-fidelity-dna-polymerase-m0491 | 1 | 2015 | New England Biolabs 2015. Mixture for M0491 Q5 PCR. protocols.io https://dx.doi.org/10.17504/protocols.io.cieubd | 2021-04-15 09:16:39 |
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