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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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W-Cyp27b1em1Thka Resource Report Resource Website |
RRID:RGD_124713544 | Rattus norvegicus | This strain was established by injecting Jcl:Wistar embryo with CRISPR/Cas9 system to delete the cysteine at position 462 in exon 8, which is the 5th ligand of heme iron and an active center of Cyp27b1. The resulting mutation is a 25 amino acid deletion (75 bp deletion) in the target site. The mutant was maintained with CE-2 formula diet (CLEA Japan, Inc., Tokyo, Japan) containing 1.15% calcium and 2,100 IU vitamin D3/kg diet. Homozygotes Cyp27b1 mutants were maintained by mating of heterozygotes. | 124713544 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 124713544 | 2026-08-29 11:49:54 | 0 | |||||
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WKAH/Tj Resource Report Resource Website |
RRID:RGD_15036806 | Rattus norvegicus | , WKA | WKAH/Tj inbred rats were bred in the Institute for Animal Experimentation, the University of Tokushima School of Medicine, under specific pathogen free conditions. | 15036806 | inbred | Rat Genome Database (RGD) | RGD | Unknown (as of 2019-11-18) | 15036806 | 2026-08-29 11:49:54 | 0 | ||||
|
SD-Shank2em13Sage Resource Report Resource Website |
RRID:RGD_126790496 | Rattus norvegicus | The Shank2 KO rat line 13 was generated by zinc finger nuclease technology targeting exon 31 for deletion . Line 13 has a 437 bp deletion around and including the entire exon 31, thereby causing a frameshift and premature stop codon in all three known isoforms of the rat Shank2 mRNA | 126790496 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126790496 | 2026-08-29 11:49:53 | 0 | |||||
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W-Vdrem2Thka Resource Report Resource Website |
RRID:RGD_124713548 | Rattus norvegicus | This strain was established by injecting Jcl:Wistar embryo with CRISPR/Cas9 system to disrupt the array near the arginine codon (CGC) at position 270 of the Vdr gene. This resulted in 1bp deletion and caused premature stop at p266 of the Vdr gene. They were allowed food and water ad libitum and fed a CE-2 formula diet ( CLEA Japan, Inc., Tokyo, Japan) containing 1.15% calcium and 2,100 IU vitamin D3/kg diet. The Vdr knock out rats for analysis were fed an F-2 formula diet (Oriental Yeast Co., Tokyo, Japan) containing 0.74% calcium and 2000 IU vitamin D/kg diet12 after weaning because the CE-2diet partially reversed their rickets symptoms. Homozygotes Vdr knock out mutants were maintained by mating of heterozygotes. | 124713548 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 124713548 | 2026-08-29 11:49:54 | 0 | |||||
|
RCS-Mertkrdy+p/LavJcl Resource Report Resource Website |
RRID:RGD_126848776 | Rattus norvegicus | This strain maintained at Japan JCLEA is homozygous at the pink eye (p) locus and homozygous for wild type Mertk gene. CLEA Japan, Inc | 126848776 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2021-04-30) | 126848776 | 2026-08-29 11:49:53 | 0 | |||||
|
Alpha IIM Resource Report Resource Website |
RRID:RGD_40924650 | Rattus norvegicus | Nine inbred lines developed from random-bred colony maintained by B. Houssay since 1948. Inbreeding and upward selection of body weight and fertility were performed in every line. Groups of rats from lines 'b' and 'alpha' were separated in 1958 and 1972 respectively and raised at the School of Medicine at Rosario. This line alpha (Alpha IIM) ), obtained from the F1 'a' X 'd', was used as control for the obese Beta line (RGD:40924649). | 40924650 | inbred | Rat Genome Database (RGD) | RGD | Unknown | 40924650 | 2026-08-29 11:49:53 | 0 | |||||
|
HXB20/IpcvMcwi Resource Report Resource Website |
RRID:RGD_149735521 | Rattus norvegicus | These are re-derived rats of HXB20/Ipcv now maintained at Medical College of Wisconsin. The parent strain wasDerived from founder strains SHR/OlaIpcv and BN-Lx/Cub RGD HRDP, contact HRDP | 149735521 | recombinant_inbred | Rat Genome Database (RGD) | RGD | Unknown | 149735521 | 2026-08-29 11:49:54 | 0 | |||||
|
SD-Cd59em1Ask-/- Resource Report Resource Website 1+ mentions |
RRID:RGD_13792606 | Rattus norvegicus | The CRISPR/Cas9 genome editing system was used to generate Cd59 mutation in the Sprague Dawley embryos. The CRISPR/Cas9 targeting exon 3 of the rat Cd59 created a 11 bp-deletion (TGCAAAACAAA) in exon 3. No protein expression was detected in the blood smear of homozygous mutants. | 13792606 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 13792606 | 2026-08-29 11:49:53 | 1 | |||||
|
SD-Leprem4Lizh Resource Report Resource Website |
RRID:RGD_21079475 | Rattus norvegicus | The Lepr knockout rats were generated by CRISPR/Cas9. Two pairs of synthesized oligonucleotides for gRNA targeting on the exon 4 of Lepr, TAGGCAAATCATCTATAACTTC and AAACGAAGTTATAGATGATTTG; TAGGCTGAAAGCTGTCTTTCAG and AAACCTGAAAGACAGCTTTCAG were microinjected into Sprague Dawley (originally from Charles River) zygotes. The rat was genotyped by PCR with the primers, 5-prime-CTTGTGTCCAGAGCCTTCCTATAAC and 5-prime-ATTCCCCATGTTGTCTAGTAGTGATC. For genotyping, a 662-bp fragment of WT and a 368-bp fragment of the Lepr knockout gene were amplified with PCR. Founder 2 was chosen to establish a colony (designated as Lepr-/-), which carried a 298-bp deletion from No. 90043 bp to 90341 bp in the Lepr genome DNA sequence (NC_005104.4) and a 4-bp insertion and resulted in a termination codon TGA, deleting 997 amino acid of LEPR. Western blot analysis of total protein from liver tissue of the Lepr-/- rats confirmed the absence of LEPR. | 21079475 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 21079475 | 2026-08-29 11:49:54 | 0 | |||||
|
SD-Abcc6em2Qlju+/- Resource Report Resource Website |
RRID:RGD_13792682 | Rattus norvegicus | This strain was produced by injecting ZFNs into SD embryos. ZFNs were designed to target exon 1 of rat Abcc6 gene at the binding site/cutting site 5-CACGCCTGGAGAGTCCTGcgcaggCCTGAGGGTGAGTCC-3 (c.24-c.62). The resulting mutation is a 23 bp-deletion (TGCGCAGGCCTGAGGGTGAGTCC) from the first coding exon of the rat Abcc6 gene. The mutation is predicted to cause out of frame translation and a premature stop codon. No protein in the homozygous mutant was detected by immunostaining. | 13792682 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 13792682 | 2026-08-29 11:49:53 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat106)/Rkb Resource Report Resource Website |
RRID:RGD_150429602 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat106)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429602 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429602 | 2026-08-29 11:49:53 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat30)/Rkb Resource Report Resource Website |
RRID:RGD_150429601 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat30)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429601 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429601 | 2026-08-29 11:49:53 | 0 | |||||
|
WI-Pmchm1Hubr Resource Report Resource Website |
RRID:RGD_150429963 | Rattus norvegicus | The Pmch mutant rat line was generated by target-selected ENU-driven mutagenesis, and high-throughput resequencing of genomic target sequences in progeny from mutagenized rats (Wistar/Crl background) revealed an ENU-induced premature stop codon in exon 1(K50X) of Pmch in a rat. The heterozygous mutant rat was backcrossed to wild-type Wistar background for six generations to eliminate confounding effects from background mutations induced by ENU. | 150429963 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150429963 | 2026-08-29 11:49:53 | 0 | |||||
|
LEXF10A/StmMcwi Resource Report Resource Website |
RRID:RGD_149735517 | Rattus norvegicus | These are re-derived rats of LEXF10A/Stm now maintained at Medical College of Wisconsin. The parent strain was derived from systematic breeding of the F2 generation between LE/Stm and F344/DuCrlj. RGD HRDP, contact HRDP | 149735517 | recombinant_inbred | Rat Genome Database (RGD) | RGD | Unknown | 149735517 | 2026-08-29 11:49:53 | 0 | |||||
|
LL/MavRrrcAek Resource Report Resource Website |
RRID:RGD_149735516 | Rattus norvegicus | In 1969 outbred Sprague-Dawley rats were selected for high systolic blood pressure using an indirect plethysmographic technique in pre-warmed unrestrained conscious rats. Three pairs were originally selected, and selection was continued with brother x sister mating. Strain LN was maintained as a normotensive control, and LL as a hypotensive strain. The strain from Rat Resource & Research Center was maintained at Department of Pharmacology, University of Iowa RGD HRDP, contact HRDP | 149735516 | inbred | Rat Genome Database (RGD) | RGD | Live Animals (as of 2024-08-06) | 149735516 | 2026-08-29 11:49:53 | 0 | |||||
|
LE/StmMcwi Resource Report Resource Website |
RRID:RGD_39456107 | Rattus norvegicus | The LE/StmMcwi was rederived from LE/Stm and maintained at Medical College of Wisconsin. The LE/Stm rats were introduced into Saitama Cancer Center Research Institute in 1969 from a closed colony of Long Evans rats maintained in the Ben May Laboratory for Cancer Research, University of Chicago. A mutant with red-eyed dilution was found in 1970 in the Long-Evans colony, and the mutation was fixed by selective mating. Thereafter, they were maintained by sister-brother mating more than F50. RGD HRDP, contact Hybrid Rat Diversity program at [email protected] | 39456107 | inbred | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2023-10-24) | 39456107 | 2026-08-29 11:49:54 | 0 | |||||
|
MWF.SHR-(D6Rat1-D6Rat184)/Rkb Resource Report Resource Website |
RRID:RGD_150429608 | Rattus norvegicus | The congenic MWF.SHR-(D6Rat1-D6Rat184)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated. | 150429608 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150429608 | 2026-08-29 11:49:53 | 0 | |||||
|
F344/StmMcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_39456105 | Rattus norvegicus | F344/StmMcwi was redelivered from F344/Stm which was derived from F344/DuCrlj. RGD HRDP, contact Hybrid Rat Diversity program at [email protected] | 39456105 | inbred | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2023-10-24) | 39456105 | 2026-08-29 11:49:53 | 1 | |||||
|
LEW-Glp1rem1Mcwi Resource Report Resource Website |
RRID:RGD_13800749 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a 84-bp deletion and skipping of exon 5 of the Glp1r gene in Lew/NCrl embryos. Contact MCW rat distribution at [email protected] | 13800749 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 13800749 | 2026-08-29 11:49:53 | 0 | |||||
|
WI-Mc4rm1Hubr Resource Report Resource Website |
RRID:RGD_13825199 | Rattus norvegicus | The Mc4r mutant rat line was generated by target-selected ENU-driven mutagenesis, and high-throughput resequencing of genomic target sequences in progeny from mutagenized rats (Wistar/Crl background) revealed an ENU-induced premature stop codon in helix 8 (K314X) of Mc4r. The heterozygous mutant rat was backcrossed to wild-type Wistar background for six generations to eliminate confounding effects from background mutations induced by ENU. | 13825199 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 13825199 | 2026-08-29 11:49:53 | 0 |
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