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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SS.SHR-(D2Rat127- D2Rat230)/Mco Resource Report Resource Website |
RRID:RGD_150517550 | Rattus norvegicus | This SS congenic carries the chromosomal fragment from the spontaneously hypertensive rat (SHR). Recombinant Progeny Testing (RPT) was used to fine-map the proteinuria locus. The congenic was developed from the recombinant families by fixing the transferred genomic interval (D2Rat127- D2Rat230) in the homozygous SHR/SHR state | 150517550 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 150517550 | 2026-08-29 11:49:53 | 0 | |||||
|
M520/NRrrcMcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_40818401 | Rattus norvegicus | To N 1951 from Heston at F51. Developed by Curtis at Columbia University Institute for Cancer Research, 1920; to Heston, 1949 at F49. It was then sent to Rat Resource and Research Center (RRRC). Medical College of Wisconsin received live animals from cryo-resuscitated pairs at RRRC in 2009. RGD HRDP, contact Hybrid Rat Diversity Program at [email protected] | 40818401 | inbred | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Embryo (as of 2024-08-06) | 40818401 | 2026-08-29 11:49:53 | 2 | |||||
|
DA/Ibiss Resource Report Resource Website |
RRID:RGD_21409752 | Rattus norvegicus | 21409752 | inbred | Rat Genome Database (RGD) | RGD | Unknown | 21409752 | 2026-08-29 11:49:54 | 0 | ||||||
|
SHR-Cfbem1Tja Resource Report Resource Website |
RRID:RGD_127285404 | Rattus norvegicus | This strain was produced by injecting ZFNs targeting exon 6 of rat complement factor b (Cfb) (target sequence: CCCCTCGGGCTCCATGaatatcTACATGGTGCTGGATG),into SHR/NCrl rat embryos. The resulting mutation is a 19-bp deletion. | 127285404 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127285404 | 2026-08-29 11:49:54 | 0 | |||||
|
WI-Tg(Fos-LacZ)Bhope Resource Report Resource Website |
RRID:RGD_14390083 | Rattus norvegicus | The lacZ gene was inserted between NcoI and SalI sites in exon 4 of the murine Fos gene . The linearized DNA was then microinjected into fertilized rat oocytes and line 1-8 was chosen for continuation. Initial SD rats were then bred onto Wistar background for >10 generations at NIDA IRP (Bruce Hope lab) | 14390083 | transgenic | Rat Genome Database (RGD) | RGD | Unknown | 14390083 | 2026-08-29 11:49:53 | 0 | |||||
|
SD-Cftrem1Sage+/+ Resource Report Resource Website |
RRID:RGD_14392817 | Rattus norvegicus | CFTR ZFN knockout rats possess a 16 bp deletion in exon 3 of the Cystic Fibrosis transmembrane conductance regulator (Cftr), resulting in loss of protein expression. The homozygous mutant rats and wild-type rats are produced by crossing the Cftr heterozygous rats. | 14392817 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 14392817 | 2026-08-29 11:49:54 | 0 | |||||
|
SD-Cftrem1Sage+/- Resource Report Resource Website |
RRID:RGD_14392813 | Rattus norvegicus | Cftr ZFN knockout rats possess a 16 bp deletion in exon 3 of the Cystic Fibrosis transmembrane conductance regulator (Cftr), resulting in loss of protein expression. This Cftr heterozygous rats exhibited similar bioelectric and other characteristics to wild-type. inotiv | 14392813 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo; Cryorecovery (as of 2023-06-06) | 14392813 | 2026-08-29 11:49:54 | 0 | |||||
|
F344.Cg-Foxn1rnu-/+/Jcl Resource Report Resource Website |
RRID:RGD_126790472 | Rattus norvegicus | This congenic strain was established as a strain with the genetic background of F344/N onto which a segment from the nude rat containing the Foxn1rnu was transferred. Originally, hairless mutant (rnu) was observed in a colony of outbred hooded rats maintained at the Rowett Research Institute in Scotland. Backcrossing started at Central Institute for Experimental Animals in 1979 and thereafter the subline was transported to CLEA Japan, Inc for production and supply of these rats. CLEA Japan, Inc | 126790472 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2021-04-22) | 126790472 | 2026-08-29 11:49:53 | 0 | |||||
|
NHla:SD Resource Report Resource Website 1+ mentions |
RRID:RGD_25824850 | Rattus norvegicus | The colony history began with a colony of rats established by Robert Dawley around 1925. SD rats are often referred to as "Sprague-Dawley" Mr. Dawley used both his name and the maiden name, "Sprague", of his wife to create the name of the stock. The colony then went to Sprague Dawley, Inc. in 1945. NIH began a closed colony with animals obtained from Sprague Dawley, Inc. Hilltop Lab Animals, Inc. received animals from NIH in 1984. Through cesarean rederivation, the animals were fostered onto gnotobiotic rats in isolation. Descendants of these animals then became the colonies currently available. All colony histories contain some possibility of inaccuracy. This information is provided to the best of Hilltop's knowledge. Hilltop Lab Animals, Inc. (http://www.hilltoplabs.com/public/sd.html) Hilltop Lab Animals, Inc. | 25824850 | outbred | Rat Genome Database (RGD) | RGD | Unknown | 25824850 | 2026-08-29 11:49:54 | 2 | |||||
|
Jcl:WIST Resource Report Resource Website |
RRID:RGD_126790511 | Rattus norvegicus | CLEA Japan, Inc., Taconic Farms Inc. (USA), and Taconic Europe (Denmark) created the Global Alliance for Laboratory Animal Standardization (GALASTM) agreement in collaboration with the Central Institute for Experimental Animals to promote the international standardization of outbred stocks usable for safety testing in the field of toxicity and pharmacology. Based on these activities,Wistar Hannover GALAS rats are derived from the Han:WIST strain from the Zentral Institut fur Versuchstierzucht (ZfV) (Hannover, Germany). In 1989, 156 pairs were introduced from ZfV to the Institute for Biomedical Research (IBM) in Switzerland (IBM underwent a structural change [name change] to BRL Ltd. and RCC Ltd.). At and after the end of 1998, RCC Ltd. gave more than 50 pairs of pedigreed BrlHan:WIST rats to each GALAS member to use as seed rats for the Wistar Hannover GALAS strain. CLEA Japan, Inc | 126790511 | outbred | Rat Genome Database (RGD) | RGD | Live Animals (as of 2021-04-23) | 126790511 | 2026-08-29 11:49:53 | 0 | |||||
|
ACI.FHH-(rgdv393055223-rs107095981)/Mcwi Resource Report Resource Website |
RRID:RGD_14975244 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] ((also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975244 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975244 | 2026-08-29 11:49:54 | 0 | |||||
|
ACI.FHH-(rs105487995-rs106411696)/Mcwi Resource Report Resource Website |
RRID:RGD_14975243 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975243 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975243 | 2026-08-29 11:49:54 | 0 | |||||
|
ACI.FHH-(rgdv393055223-rs198076037)/Mcwi Resource Report Resource Website |
RRID:RGD_14975246 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975246 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975246 | 2026-08-29 11:49:54 | 0 | |||||
|
ACI.FHH-(rs105373896-rgdv253272372)/Mcwi Resource Report Resource Website |
RRID:RGD_14975247 | Rattus norvegicus | This congenic line was produced by backcrossing ACI.FHH-[D1Rat74-D1Rat90] (also named Rf-1A, RGD:5143940) congenic rats to ACI rats to initiate the generation of Rf-1 congenic sublines. Offspring that had inherited a desirable recombination within the Rf-1 region were selected. These selected offspring were backcrossed and intercrossed to produce homozygous congenic sublines used for phenotyping. | 14975247 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 14975247 | 2026-08-29 11:49:54 | 0 | |||||
|
ACI.Cg.-Cdkn1bem4Musc Resource Report Resource Website |
RRID:RGD_126928150 | Rattus norvegicus | The CRISPR-Cas9 system targeted to exon 2 of the rat Cdkn1b was injected to zygotes derived from the Sprague-Dawley outbred rat strain. Two mutations with the highest potential impact on Cdkn1b function were transferred through the germline showing a 32-bp deletion (DEL-32, em1Musc) and a 65-bp deletion (DEL-65, em4Musc), both disrupting the open reading frame of the Cdkn1b gene. The selected mutations were breded to the ACI inbred strain for future study. This mutant strain ACI.Cg.-Cdkn1bem4Musc harbors 65-bp deletion of Cdkn1b exhibits same phenotype as the em1Musc with 32-bp deletion | 126928150 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126928150 | 2026-08-29 11:49:53 | 0 | |||||
|
SD-Lrp5em2Vari Resource Report Resource Website |
RRID:RGD_41404648 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a 22-bp deletion at the sgRNA2 site of exon 2 in the rat Lrp5 gene of Crl:SD embryos. | 41404648 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 41404648 | 2026-08-29 11:49:54 | 0 | |||||
|
SD-Myh7bem1Blar-/- Resource Report Resource Website |
RRID:RGD_126925952 | Rattus norvegicus | The Myh7b knockout SD rats were generated using the CRISPR/Cas9 system targeting exon 2, resulting 7 bases deletion of exon 2 and generated a new termination codon TGA in exon 3. The heterzygous Myh7b+/- rats were crossed to generate littermate controls. The birth ratio of wild type (WT):Myh7b+/-:Myh7b-/- was approximately 1:2:1, indicating that Myh7b-/- did not cause fetal death. | 126925952 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126925952 | 2026-08-29 11:49:53 | 0 | |||||
|
SS-Per1em3Mcwi Resource Report Resource Website |
RRID:RGD_13825147 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a 1-bp deletion in exon 1 of Per1 gene in SS/JrHsdMcwi rat embryos. Contact MCW rat distribution at [email protected] | 13825147 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 13825147 | 2026-08-29 11:49:53 | 0 | |||||
|
DA-Tph2em3Mcwi+/- Resource Report Resource Website |
RRID:RGD_14394617 | Rattus norvegicus | The Tph2em3Mcwi heterozygous mutant was created by injecting ZFNs targeting the sequence CATGGCTCCGACCCCctctacACCCCGGAACCG into DA/OlaHsd rat embryos. The resulting mutation is a 11-bp frameshift deletion in exon 7. | 14394617 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 14394617 | 2026-08-29 11:49:54 | 0 | |||||
|
LCR/Tol Resource Report Resource Website |
RRID:RGD_39457699 | Rattus norvegicus | Artificially selected for aerobic running capacity from the genetic heterogenous rats; these were selected for low capacity based on distance run to exhaustion on a motorized treadmill. | 39457699 | inbred | Rat Genome Database (RGD) | RGD | Unknown | 39457699 | 2026-08-29 11:49:53 | 0 |
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