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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.

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  • Species:rattus norvegicus (facet)

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Organism Name Proper Citation Species Synonyms Notes Phenotype Affected Gene Genomic Alteration Catalog Number Background Database Database Abbreviation Availability Source References Alternate IDs Record Last Update Mentions Count
F344/IcoCrl
 
Resource Report
Resource Website
RRID:RGD_13800555 Rattus norvegicus From mating #344 of rats purchased from a local breeder (Fischer). The colony was originated by M. R. Curtis, Columbia University in 1920. To the Germ-Free Animal Laboratory at CNRS, Gif-sur-Yvette, France from the Lobund Institute, University of Notre-Dame, South Bend, Indiana, U.S.A. Subsequently introduced to Charles River France in 1970 as an axenic colony. Charles River 13800555 inbred Rat Genome Database (RGD) RGD Unknown 13800555 2026-08-29 11:49:53 0
WKY.SHRSP-(D1Mgh5-D1Arb21)(D3Rat36-D3Rat144)(D4Mgh7-D4Rat68)/Izm
 
Resource Report
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RRID:RGD_12879428 Rattus norvegicus A double congenic strain bade by introducing segments of chromosome 1, 3, and 4 from SHRSP/Izm into WKY/Izm. This strain was established by mating between WKY.SHRSP-(D1Mgh5-D1Arb21)(D3Mgh16-D3Rat144)/Izm(NBRP Rat No:0713)and WKY.SHRSP-(D1Mgh5-D1Arb21) (D4Mgh7-D4Rat68)/IzmCNBRP Rat No:0714). This strain was established and is maintained in Shimane University. National BioResource Project for the Rat in Japan 12879428 congenic Rat Genome Database (RGD) RGD Cryopreserved Embryo (as of 2017-04-19) 12879428 2026-08-29 11:49:52 0
SD-Abcg2em1Sage
 
Resource Report
Resource Website
RRID:RGD_12904063 Rattus norvegicus This ZFN model carries a 588-bp deletion within Abcg2 gene. Homozygous knockouts display total loss of protein via Western blot Horizon Discovery 12904063 mutant Rat Genome Database (RGD) RGD Live Animals (as of 2017-05-16) 12904063 2026-08-29 11:49:52 0
F344-Hsd11b2em1Jmul+/+
 
Resource Report
Resource Website
1+ mentions
RRID:RGD_13800557 Rattus norvegicus This is the wild-type litter mates of the Hsd11b2 F344 mutants created by ZFN system targeting exon 2 of Hsd11b2 gene was injected into the F344/IcoCrl embryos to induce a 123-bp deletion removing the 3' end of exon 2 and the first 16-bp of intron B and create a premature stop coden TAG. 13800557 mutant Rat Genome Database (RGD) RGD Unknown 13800557 2026-08-29 11:49:53 1
SS.ZUC-Leprfa-/+/Slc
 
Resource Report
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RRID:RGD_13432150 Rattus norvegicus SS.ZUC-Leprfa/Slc rats were generated as the result of an initial mating of a male Zucker rat (Japan SLC) heterozygous for the fa allele of Lepr with a female DahlS/JrSeac rat (Seac, Japan), followed by multiple rounds of backcrossing of the resulting progeny to the SS strain. 13432150 congenic Rat Genome Database (RGD) RGD Unknown 13432150 2026-08-29 11:49:52 0
F344/Nctr
 
Resource Report
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RRID:RGD_13506919 Rattus norvegicus Curtiss and Dunning 1920 at Columbia University Institute for Cancer Research, To National Center for Toxicological Research, FDA. 13506919 inbred Rat Genome Database (RGD) RGD Unknown 13506919 2026-08-29 11:49:52 0
SS.BN-(D13Hmgc1048-D13Hmgc1050)-Pappa2em4Mcwi
 
Resource Report
Resource Website
RRID:RGD_13204756 Rattus norvegicus CRISPR/Cas9 system was used to introduce a 5-bp deletion in exon 2 of the rat Pappa2 gene of SS.BN-(D13Hmgc1048-D13Hmgc1050)/Mcwi rat embryos. Contact MCW rat distribution at [email protected] 13204756 mutant Rat Genome Database (RGD) RGD Cryopreserved Sperm (as of 2021-11-03) 13204756 2026-08-29 11:49:52 0
FHH-Mybphlem1Mcwi
 
Resource Report
Resource Website
RRID:RGD_13800838 Rattus norvegicus CRISPR/Cas9 system was used to introduce a 2-bp deletion in exon 1 of rat Mybphl gene in the FHH/EurMcwi embryos. Contact MCW rat distribution at [email protected] 13800838 mutant Rat Genome Database (RGD) RGD Cryopreserved Sperm (as of 2021-11-03) 13800838 2026-08-29 11:49:52 0
SS.ZUC-Leprfa-/-/Slc
 
Resource Report
Resource Website
RRID:RGD_13432148 Rattus norvegicus SS.ZUC-Leprfa/Slc rats were generated as the result of an initial mating of a male Zucker rat (Japan SLC) heterozygous for the fa allele of Lepr with a female DahlS/JrSeac rat (Seac, Japan), followed by multiple rounds of backcrossing of the resulting progeny to the SS strain. 13432148 congenic Rat Genome Database (RGD) RGD Unknown 13432148 2026-08-29 11:49:52 0
CrlFfyb:SD
 
Resource Report
Resource Website
RRID:RGD_13208540 Rattus norvegicus Descendants of rats from the Charles River Laboratories (USA),then to Fvet at Buenos Aires University and since 2014 maintained at Bioterio Central of Facultad de Farmacia y Bioquimica de la Universidad de Buenos Aires. Junin 956 Ciudad Autonoma de Buenos Aires, Argentina Bioterio Central of Facultad de Farmacia y Bioquimica de la Universidad de Buenos Aires. Junin 956 Ciudad Autonoma de Buenos Aires, Argentina 13208540 outbred Rat Genome Database (RGD) RGD Unknown (as of 2024-09-13) 13208540 2026-08-29 11:49:52 0
SD-Sncaem1Sage
 
Resource Report
Resource Website
RRID:RGD_13782164 Rattus norvegicus This model contains a deletion of the endogenous rat SNCA gene, encoding the alpha-synuclein protein. This model was generated using the CRISPR/Cas9 genome targeting strategy. Horizon Discovery 13782164 mutant Rat Genome Database (RGD) RGD Live Animals (as of 2018-08-24) 13782164 2026-08-29 11:49:53 0
SD-Sncatm1(SNCA*)Sage
 
Resource Report
Resource Website
RRID:RGD_13782163 Rattus norvegicus This model contains a knockin of the A53T-mutated SNCA gene deeming the rat SNCA gene non-functional. The knockin contains humanized amino acids for the region spanning amino acids 53-122. The resulting model expresses a humanized A53T alpha-synuclein protein without endogenous rat alpha-synuclein. Horizon Discovery 13782163 mutant Rat Genome Database (RGD) RGD Live Animals (as of 2018-08-24) 13782163 2026-08-29 11:49:53 0
SD-Abcb1aem1Sage -/-
 
Resource Report
Resource Website
RRID:RGD_12904057 Rattus norvegicus This ZFN model contains biallelic 20 bp deletion within Abcba1 gene. Animals exhibit increased oral bioavailability of P-gp-specific substrates. The homozygous knockout rats display total loss of protein via Western blot. Horizon Discovery 12904057 mutant Rat Genome Database (RGD) RGD Live Animals (as of 2017-05-16) 12904057 2026-08-29 11:49:52 0
FHH-Muc1em1Mcwi
 
Resource Report
Resource Website
RRID:RGD_13800825 Rattus norvegicus CRISPR/Cas9 system was used to introduce a 2-bp deletion in exon 2 of rat Muc1 gene in the FHH/EurMcwi embryos. Contact MCW rat distribution at [email protected] 13800825 mutant Rat Genome Database (RGD) RGD Cryopreserved Sperm (as of 2018-10-18) 13800825 2026-08-29 11:49:52 0
SD-(Abcb1a- Abcb1b)em1Sage
 
Resource Report
Resource Website
RRID:RGD_12904059 Rattus norvegicus This model carries knockout of Abcb1a and Abcb1b. Horizon Discovery 12904059 mutant Rat Genome Database (RGD) RGD Live Animals (as of 2017-05-16) 12904059 2026-08-29 11:49:52 0
BN-Crb1m1
 
Resource Report
Resource Website
RRID:RGD_13451132 Rattus norvegicus This Brown Norway from Janvier rat strain spontaneously develops progressive focal retinal layer disorganization, loss of photoreceptors, cystic cavitation, and RMG abnormalities associated with early retinal vascular telangiectasia and late stage subretinal neovascularization. This phenotype bears reminiscent of human Macular telangiectasia 2. A deletion insertion mutation in exon 6 of the rat crb1 was identified to be responsible for this retinal phenotype. 13451132 mutant Rat Genome Database (RGD) RGD Unknown 13451132 2026-08-29 11:49:52 0
ACI.BN-(Fer1l6rgdv775925951-C-D7Uwm28)/Shul
 
Resource Report
Resource Website
RRID:RGD_13210774 Rattus norvegicus This congenic strain contains a region of BN/SsNHsd chromosome 7 transferred to the ACI/SegHsd strain background. 13210774 congenic Rat Genome Database (RGD) RGD Unknown 13210774 2026-08-29 11:49:52 0
LEW-Chrnb4em5Mcwi
 
Resource Report
Resource Website
RRID:RGD_13207488 Rattus norvegicus CRISPR/Cas9 system was used to introduce a mutation in the Chrnb4 gene of LEW/NCrl rat embryos. The resulting mutation is a 4-bp deletion of exon 4 in the Chrnb4 gene. Contact MCW rat distribution at [email protected] 13207488 mutant Rat Genome Database (RGD) RGD Cryopreserved Sperm (as of 2021-11-03) 13207488 2026-08-29 11:49:52 0
SD-Nr1i2em1Sage Nr1i3em1Sage Ahrem1Sage
 
Resource Report
Resource Website
1+ mentions
RRID:RGD_12903272 Rattus norvegicus This model contains three knockout genes, the 20-bp deletion within rat Nr1i2, the ZFN-induced 10-bp deletion within rat Nr1i3 gene and the 760-bp deletion in the rat Ahr gene. Horizon Discovery 12903272 mutant Rat Genome Database (RGD) RGD Cryopreserved Embryo (as of 2017-05-10) 12903272 2026-08-29 11:49:52 1
SD-Tg(CAG-loxP-stop-loxP-Mfn1-GFP)1Mcwi
 
Resource Report
Resource Website
RRID:RGD_13792825 Rattus norvegicus The Sleeping Beauty transposon system was used to introduce a Mfn1-GFP fusion driven by a ubiquitous promoter, interupted by a floxed stop cassette. This is line A. Contact MCW rat distribution at [email protected] 13792825 transgenic Rat Genome Database (RGD) RGD Unknown 13792825 2026-08-29 11:49:52 0

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