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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SD-Tspoem1Vpl Resource Report Resource Website |
RRID:RGD_150429828 | Rattus norvegicus | Tspo-targeted genome editing in Sprague Dawley rats embryos by microinjecting with optimized and customized ZFNs designed for targeted gene KO. Locus-specific PCR was performed to identify Rat5 founders using the following primer pairs: CKOZFN-F: 50-AGAGCATACTCTTGCCGTCG-30 and CKOZFN-R:50-ACTCCTAAAGGGGTTGCAGG-30; Normal PCRs generated 362 bp for the WT and 273 bp for the mutant,(89 bp deletion). | 150429828 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150429828 | 2026-08-29 11:49:57 | 0 | |||||
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SD-Il36rntm1(Myh6-cre)Mhzh Resource Report Resource Website |
RRID:RGD_126925134 | Rattus norvegicus | This line was produced by mating rats carrying Il36rnf/f allele and Myh6-cre-allele. The expression of Il36rn was knockout in cardiomyocytes. | 126925134 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126925134 | 2026-08-29 11:49:57 | 0 | |||||
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SD-Fmr1em1Mzhe Resource Report Resource Website |
RRID:RGD_45073130 | Rattus norvegicus | The CRISPR/Cas9 system was used to introduce deletions/mutations in exon 4 of the rat Fmr1 gene of outbred Sprague- Dawley embryos. The resulting mutation is a deletion of five amino acids and a G-A mutation in the Fmr1 gene. This genetic modification results in a frame-shift starting from the second Agenet-like 2 domain in the Fmr1 protein. | 45073130 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 45073130 | 2026-08-29 11:49:57 | 0 | |||||
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WKY-Dnd1ter/Ztm Resource Report Resource Website |
RRID:RGD_126777687 | Rattus norvegicus | A spontaneous mutation (ter) leading to the formation of congenital ovarian and testicular tumors was detected in the WKY/Ztm rat strain. Sequence analysis detected a point mutation in exon 4 of the rat Dnd1, which introduces a premature stop codon assumed to cause a truncation of the Dnd1 protein. This recessive ter mutation has a complete penetrance of teratocarcinogenesis and infertility of both sexes in homozygous genotype. | 126777687 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126777687 | 2026-08-29 11:49:57 | 0 | |||||
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LEW-Erap1em1Reh2786 Resource Report Resource Website |
RRID:RGD_150523781 | Rattus norvegicus | The ZFN mRNA targeting exon 2 of Erap1 was microinjected into both the pronuclei and the cytoplasm of fertilized LEW eggs. This strain was heterozygous for a 2-bp deletion within the targeted AGGAGA sequence of Erap1. | 150523781 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150523781 | 2026-08-29 11:49:58 | 0 | |||||
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BDIX/OrlIco Resource Report Resource Website |
RRID:RGD_150527860 | Rattus norvegicus | Rats selected in 1937 by H. Druckrey in Berlin from a strain of yellow coated, pink-eyed rats. It is part of a series of BD I to X strains produced at Max Planck Institute, Freiburg and was introduced to France in 1971 to the INSERM unit, Immunology Laboratory, Dijon where it was maintained in strict brother-sister inbreeding. Developed and studied by Dr. Ms. Martin, CNRS/CSEAL, Orleans (Orl) acquired by IFFA CREDO later (Ico). Charles River Laboratories | 150527860 | inbred | Rat Genome Database (RGD) | RGD | Unknown | 150527860 | 2026-08-29 11:49:58 | 0 | |||||
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SS-Ucp2em1Mcwi Resource Report Resource Website |
RRID:RGD_151665324 | Rattus norvegicus | Generated by CRISPR/Cas9 mutagenesis of SS/JrHsdMcwi rats by Aron Geurts. The resulting mutation is a 23-bp deletion (rn7: chr1:154,842,967-154,842,989) contact MCW Rat Distribution at [email protected] | 151665324 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2022-03-18) | 151665324 | 2026-08-29 11:49:58 | 0 | |||||
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SHRSP.SHR-(D1Rat23-D1Rat213)(D18Rat73-D18Rat52)/Izm Resource Report Resource Website |
RRID:RGD_38599202 | Rattus norvegicus | A double congenic strain made by introducing a segments of chromosome 1 and 18 from SHR/Izm into SHRSP/Izm. National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan. | 38599202 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-09-15) | 38599202 | 2026-08-29 11:49:57 | 0 | |||||
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SD-Nkx3-1em1Pjhak+/- Resource Report Resource Website |
RRID:RGD_150573816 | Rattus norvegicus | A pair of TALENs targeting coding region of rat Nkx3-1gene was electroporated into SD zygotes to create NKx3-1 mutants. The resulting mutation was indel mutation with sequences loss beyond TALEN recognition resulting a premature termination codon of the protein. | 150573816 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150573816 | 2026-08-29 11:49:58 | 0 | |||||
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F344-Angptl8em2Kyo-/- Resource Report Resource Website |
RRID:RGD_127345125 | Rattus norvegicus | This line #2 Angptl8 knock out (KO) rats were generated using the CRISPR/Cas9 system containing two guide RNAs (gRNAs) targeting exons 2 and 3 in the rat Angptl8 gene. A mixture of transcribed Cas9 and gRNAs was microinjected into F344/Stm rat zygotes [National BioResource Project rat number: 0140) provided by the National BioResource Project for the Rat in Japan. Two lines of rats heterozygous for Angptl8 (lines #1 and #2). Male and female Het rats were intercrossed to obtain homozygous Angptl8 KO rats. Rats were genotyped by PCR with the following primers5'-GGGTGAGCAAAGCTGACCTA-3' (sense) and 5'-GAGTAAACCCACCAGGCTCA-3' (antisense) for line #2. A 980-bp deletion in the ANGPTL8 gene was identified in line # 2, resulting in a premature termination codon. National BioResource Project for the Rat in Japan | 127345125 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127345125 | 2026-08-29 11:49:57 | 0 | |||||
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SD-Gnalem1Hpng+/- Resource Report Resource Website |
RRID:RGD_150429814 | Rattus norvegicus | The heterozygousGnal mutant rats were created by CRISPR/Cas9. Guide RNA sequences targeting the first exon of the rat Gnal gene isoform 2 were designed. The mutated allele contained a 13- bp deletion in exon1 that corresponded to position 34 to 46 downstream of the translation start point ATG of the Gnal splicing variant 2 was detected resulting in an early stop at position 150 and producing a truncated protein with 50 amino acids . European Mouse Mutant Archive(EMMA) | 150429814 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2025-09-04) | 150429814 | 2026-08-29 11:49:58 | 0 | |||||
|
F344-Angptl8em2Kyo+/- Resource Report Resource Website |
RRID:RGD_127345126 | Rattus norvegicus | This line #2 Angptl8 heterozygous rats were generated using the CRISPR/Cas9 system containing two guide RNAs (gRNAs) targeting exons 2 and 3 in the rat Angptl8 gene. A mixture of transcribed Cas9 and gRNAs was microinjected into F344/Stm rat zygotes [National BioResource Project rat number: 0140) provided by the National BioResource Project for the Rat in Japan. Two lines of rats heterozygous for Angptl8 (lines #1 and #2). Male and female Het rats were intercrossed to obtain homozygous Angptl8 KO rats. Rats were genotyped by PCR with the following primers5'-GGGTGAGCAAAGCTGACCTA-3' (sense) and 5'-GAGTAAACCCACCAGGCTCA-3' (antisense) for line #2. A 980-bp deletion in the ANGPTL8 gene was identified in line # 2, resulting in a premature termination codon. National BioResource Project for the Rat in Japan | 127345126 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 127345126 | 2026-08-29 11:49:57 | 0 | |||||
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SS-Tg(CAG-Fh)A1Mcwi Resource Report Resource Website |
RRID:RGD_151893484 | Rattus norvegicus | This is a transgenic model created using Sleeping Beauty system. The transgenic animals are overexpressing fumarate hydratase (Fh) under the control of the ubiquitous CAG promoter in the Dahl salt-sensitive strain background. contact MCW Rat Distribution at [email protected] | 151893484 | transgenic | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm (as of 2022-04-21) | 151893484 | 2026-08-29 11:49:58 | 0 | |||||
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SS-Gper1em1Bj-/- Resource Report Resource Website |
RRID:RGD_126848793 | Rattus norvegicus | CRISPR/Cas 9 was utilized to delete rat Gper1 gene in the one-cell embryos of SS/Jr rats. RNA validation performed via deletion PCR using a sense primer at the 5' end and an antisense primer at the 3' end showed a deletion PCR product of 544 bps versus wild-type PCR product of 1484 bps. The homozygous founders had complete deletion of Gper1 was confirmed by DNA sequenching. | 126848793 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126848793 | 2026-08-29 11:49:57 | 0 | |||||
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SHR-Zbtb16em1Ipcv+/- Resource Report Resource Website |
RRID:RGD_126848794 | Rattus norvegicus | TALEN was used to target Zbtb16 (Plzf )in the SHR and one founder with a deletion of G at position 93 of the coding sequence (c.93delG) was identified. That deletion resulted in a frameshift downstream glycine 31 (p.Gly31fs). The frameshift mutation caused the incorporation of 20 aberrant amino acids downstream of the deleted G, followed by a stop codon. The founder was bred with SHR to generate more heterozygous animals. The homozygous animals die perinatally because of multiple developmental abnormalities. | 126848794 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 126848794 | 2026-08-29 11:49:57 | 0 | |||||
|
SHRSP.SHR-(D1Mgh5-D1Got87)(D18Rat73-D18Rat11)/Izm Resource Report Resource Website |
RRID:RGD_38599187 | Rattus norvegicus | A double congenic strain made by introducing a segments of chromosome 1 and 18 from SHR/Izm into SHRSP/Izm. Developed by Dr. Tohru Nabika from Shimane University. National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan. | 38599187 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2020-09-14) | 38599187 | 2026-08-29 11:49:57 | 0 | |||||
|
SD-Ighmem1Ang Resource Report Resource Website |
RRID:RGD_150523755 | Rattus norvegicus | The mutation in this rat strain (line 19) comprised a 64 bp deletion of the IgM CH1 domain and generation of a stop codon. This strain carries deletion in both alleles has truncated Cmu. | 150523755 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150523755 | 2026-08-29 11:49:58 | 0 | |||||
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SD-Wfs1em3Ptsn Resource Report Resource Website |
RRID:RGD_149735338 | Rattus norvegicus | Rat Wfs1 exon 5-specific zinc-finger nucleases (ZNFs) and microinjection-ready mRNA were injected to embryos harvested from female Sprague-Dawley rats (Crl: CD(SD) )rats. Thereafter, microinjected egg cells were transferred to the oviduct of pseudopregnant Sprague-Dawley recipients.Three different Wfs1 mutant rat lines were created: Wfs1em1 ( Wfs1-ex5-KO232), Wfs1em2 (Wfs1-ex5-KO266) and Wfs1em3 (Wfs1-ex5-INS244). Wfs1em3 rats carry a substitution in exon 5 of the Wfs1 gene, which is predicted to result in a substitution of LQK (aa 224-226) into YCMNTI in the WFS1 protein. | 149735338 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 149735338 | 2026-08-29 11:49:57 | 0 | |||||
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SS-Vwfem4Mcwi Resource Report Resource Website |
RRID:RGD_150429598 | Rattus norvegicus | The rat strain was created via CRISPR/Cas9 targeting the VWF gene in DahlSS/Mcw (SS/JrHsdMcwi ) rat embryos. The resulting rat strain has a 13bp deletion in the untranslated region of Exon 52 of the VWF gene (g.158491511 - 158491523 on chromosome 4, Assembly: mRatBN7.2) The 13-bp deletion happens to be in the region where the polyadenylation signal resides (AAUAAA). The resulting mRNA is not polyadenylated and has trouble with transport from the nucleus to the cytoplasm. The result is a phenotype that is similar to a Type I von Willebrand Disease, being a partial quantitative deficiency of the circulating VWF protein. Some mRNA must make it through to translation, because low levels of VWF protein are detectable via ELISA (<10%). Both homozygous pairs and heterozygous pairs were used for breeding. Rat Genetic Models, through Versiti Blood Research Institute | 150429598 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 150429598 | 2026-08-29 11:49:57 | 0 | |||||
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W/Lnne Resource Report Resource Website |
RRID:RGD_150521605 | Rattus norvegicus | Wistar rats maintained at the animal facility of the Ribeirao Preto School of Medicine at the University of Sao Paulo, Brazil, were tested for audiogenic seizures, using as criteria an SI and the L1 (ref. RGD:14695082). The WAR colony foundation stock was produced by mating animals displaying at least procursive behaviors in three consecutive tests, one every 4 days (two males and four females). Each couple produced two or three lit-ters, from which selected individuals displaying the highest SI and shortest L1 were mated, at adult age,with their fathers and mothers. From the second generation on, brother and sister matings were done, in a ratio of one male to two females, selected accordingto the criteria above. | 150521605 | inbred | Rat Genome Database (RGD) | RGD | Unknown | 150521605 | 2026-08-29 11:49:58 | 0 |
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