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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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OP720 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030453 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs720. | Made_by: DKV/RJT/PW|"Modern strain"|"wgIs720 [lsl-1::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030453 | WormBase (WB) | WB | available | WB-STRAIN:OP720, CGC_OP720 | 2026-08-15 09:31:19 | 0 | |||
|
OP716 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030450 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs716. | Made_by: DKV/RJT/PW|"Modern strain"|"wgIs716 [F26F4.8::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030450 | WormBase (WB) | WB | unknown | WB-STRAIN:OP716 | 2026-08-15 09:31:19 | 0 | |||
|
OP717 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030451 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs717. | Made_by: DKV/RJT/PW|"wgIs717 [K04C1.3::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030451 | WormBase (WB) | WB | available | WB-STRAIN:OP717, CGC_OP717 | 2026-08-15 09:31:19 | 0 | |||
|
OP730 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030458 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs730. | Generated from Paper data WBPaper00060123|"Made_by: DKV/RJT/PW"|"Modern strain"|"wgIs730 [vab-15::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030458 | WormBase (WB) | WB | available | WB-STRAIN:OP730, CGC_OP730 | 2026-08-15 09:31:20 | 0 | |||
|
OP731 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030459 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs731. | Made_by: DKV/RJT/PW|"wgIs731 [cdc-14::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030459 | WormBase (WB) | WB | available | WB-STRAIN:OP731, CGC_OP731 | 2026-08-15 09:31:20 | 0 | |||
|
OP729 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030457 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs729. | Made_by: Waterston Lab|"wgIs729 [frpr-9::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030457 | WormBase (WB) | WB | available | WB-STRAIN:OP729, CGC_OP729 | 2026-08-15 09:31:20 | 0 | |||
|
OP738 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030463 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs738. | Made_by: Waterston Lab|"wgIs738 [Y37F4.6::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030463 | WormBase (WB) | WB | available | WB-STRAIN:OP738, CGC_OP738 | 2026-08-15 09:31:20 | 0 | |||
|
OP739 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030464 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs739. | Generated from Paper data WBPaper00060123|"Made_by: DKV/RJT/PW"|"Modern strain"|"wgIs739 [ceh-19::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030464 | WormBase (WB) | WB | available | WB-STRAIN:OP739, CGC_OP739 | 2026-08-15 09:31:20 | 0 | |||
|
OP789 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030501 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs789. | Made_by: DKV/MC|"wgIs789 [tab-1::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030501 | WormBase (WB) | WB | available | WB-STRAIN:OP789, CGC_OP789 | 2026-08-15 09:31:20 | 0 | |||
|
OP740 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030465 | Caenorhabditis elegans | unc-119(tm4063) III; wgIs740. | Made_by: Waterston Lab|"Modern strain"|"wgIs740 [lin-32::TY1::EGFP::3xFLAG + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. References: Sarov M, et al. Nat Methods (2006) 10:839-44. Zhong, M, et al. PLoS Genet (2010) 6(2):e1000848. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org)." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030465 | WormBase (WB) | WB | available | WB-STRAIN:OP740, CGC_OP740 | 2026-08-15 09:31:20 | 0 | |||
|
PD56 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030551 | Caenorhabditis elegans | tra-3(e1107) IV; ccIs56 V. | ccIs56 [sup-7(st5) +unc-54::lacZ] V. Non-nuclear unc-54::lacZ fusion expressed in nuclei and cytoplasm of body wall muscles. | WBGene00006606(tra-3) | WBGene00006606(tra-3) | WB-STRAIN:WBStrain00030551 | WormBase (WB) | WB | available | PMID:8244003 | WB-STRAIN:PD56, CGC_PD56 | 2026-08-15 09:31:21 | 0 | ||
|
PD126 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030552 | Caenorhabditis elegans | unc-54(e190) I; ccIs126. | ccIs126 [myo-2p::lacZ + unc-54(+)]. lacZ expression in pharyngeal and body wall muscles. Superficially wild-type, but gives some paralyzed animals. | WBGene00006789(unc-54) | WBGene00006789(unc-54) | WB-STRAIN:WBStrain00030552 | WormBase (WB) | WB | available | PMID:8244003 | WB-STRAIN:PD126, CGC_PD126 | 2026-08-15 09:31:21 | 0 | ||
|
PD2218 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00030557 | Caenorhabditis elegans | ccTi1594 umnIs7 III. | ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. umnIs7 [myo-2p::GFP + NeoR, III:9421936] III. GFP expression in germline and GFP expression in pharynx. High penetrance of non-Mendelian inheritance. Neomycin resistant. The GPR-1 overexpression transgene consistently confers a high penetrance of non-Mendelian inheritance; fluorescent markers allow tracking of Mendelian and non-Mendelian events. The genomic location of ccTi1594 is with respect to the WEBcel235 assembly.|"Supplementary_genotype ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. umnIs7 [myo-2p::GFP + NeoR, III:9421936] III" | WB-STRAIN:WBStrain00030557 | WormBase (WB) | WB | available | PMID:37878696 | WB-STRAIN:PD2218, CGC_PD2218 | 2026-08-15 09:31:21 | 1 | ||||
|
PD2220 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030558 | Caenorhabditis elegans | ccTi1594 umnIs27 III. | ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. umnIs27 [myo-2::GFP + NeoR, III: 8856215 (intergenic)] III. GFP expression in germline and GFP expression in pharynx. High penetrance of non-Mendelian inheritance. Neomycin resistant. The GPR-1 overexpression transgene consistently confers a high penetrance of non-Mendelian inheritance; fluorescent markers allow tracking of Mendelian and non-Mendelian events. The genomic location of ccTi1594 is with respect to the WEBcel235 assembly. | WB-STRAIN:WBStrain00030558 | WormBase (WB) | WB | available | PMID:39300074 | WB-STRAIN:PD2220, CGC_PD2220 | 2026-08-15 09:31:21 | 0 | ||||
|
PD1594 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00030555 | Caenorhabditis elegans | ccTi1594 unc-119(ed3) III. | ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. GFP expression in germline. Transgene rescues unc-119(ed3). Improved GPR-1 over-expression transgene appears to be stably expressed in the germline at a wide range of temperatures and does not require special handling. (unlike other GPR-1 overexpressing transgenes previously described in the literature). The GPR-1 overexpression transgene consistently confers a high penetrance of non-Mendelian inheritance. Neomycin resistant. The genomic location of ccTi1594 is with respect to the WEBcel235 assembly.|"Made_by: Christian Froekjaer Jensen" | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030555 | WormBase (WB) | WB | available | WB-STRAIN:PD1594, CGC_PD1594 | 2026-08-15 09:31:21 | 1 | |||
|
PD2217 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00030556 | Caenorhabditis elegans | ccTi1594 unc-119(ed3) III; hjSi20 IV. | ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. hjSi20 [myo-2p::mCherry::unc-54 3'UTR] IV. GFP expression in germline. mCherry expression in pharynx. The ccTi1594 transgene rescues unc-119(ed3). High penetrance of non-Mendelian inheritance. The GPR-1 overexpression transgene consistently confers a high penetrance of non-Mendelian inheritance; fluorescent markers allow tracking of Mendelian and non-Mendelian events. The genomic location of ccTi1594 is with respect to the WEBcel235 assembly. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00030556 | WormBase (WB) | WB | available | PMID:38946472 | WB-STRAIN:PD2217, CGC_PD2217 | 2026-08-15 09:31:21 | 2 | ||
|
PD1074 Resource Report Resource Website 10+ mentions |
RRID:WB-STRAIN:WBStrain00030553 | Caenorhabditis elegans | EMPTY | A defined and recently cloned population of animals derived from the original Bristol variant of C. elegans originally obtained by Brenner from E. Dougherty with no known history of mutagenesis. Brenners original population, called N2, was used as the basis for the vast majority of laboratory strains in use currently. No early frozen stock of the unmutagenized N2 population currently exists, but later stocks were available from several laboratories. PD1074 is a clonal population founded by picking a single worm of one such stock, VC3510. VC3510 in turn derives from a subpopulation of N2 described in the literature as VC2010. PD1074 is intended to be used as a wild type reference strain with the closely matched genome assembly of Yoshimura et al (ref) available on Wormbase as VC2010-1.0. (ENA study accession PRJEB28388; assembly accession GCA_900538205). We note that PD1074 is expected to be largely similar to most lab N2 strains, but that as a clonal isolate derived from N2, there will be some loci that will vary compared to any other particular N2 isolate. One such example is a partial deletion of the alh-2 locus in PD1074. Additional loci that were found to vary between the prior N2 reference genome (WormBase release WS264) and the VC2010-1.0 assembly are detailed in supplemental table 8 in Yoshimura et al (ref).|"A defined and recently cloned population of animals derived from the original Bristol variant of C. elegans originally obtained by Brenner from E. Dougherty with no known history of mutagenesis. Brenners original population, called N2, was used as the basis for the vast majority of laboratory strains in use currently. No early frozen stock of the unmutagenized N2 population currently exists, but later stocks were available from several laboratories. PD1074 is a clonal population founded by picking a single worm of one such stock, VC3510. VC3510 in turn derives from a subpopulation of N2 described in the literature as VC2010. PD1074 is intended to be used as a wild type reference strain with the closely matched genome assembly of Yoshimura, et al. (Genome Res. 2019 Jun;29(6):1009-1022) available on Wormbase as VC2010-1.0. (ENA study accession PRJEB28388; assembly accession GCA_900538205). We note that PD1074 is expected to be largely similar to most lab N2 strains, but that as a clonal isolate derived from N2, there will be some loci that will vary compared to any other particular N2 isolate. One such example is a partial deletion of the alh-2 locus in PD1074. Additional loci that were found to vary between the prior N2 reference genome (WormBase release WS264) and the VC2010-1.0 assembly are detailed in supplemental table 8 in Yoshimura, et al, (2019)."|"Added Wild_Isolate tag as genotype info suggesting that they were sampled from the wild."|"Made_by: Karen Artiles & Mark Edgley"|"no longer available from the CGC."|"Supplementary_genotype"|"WBStrain provided so WBPaper00061243 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061573 paper added based on AFP_Strain data." | WB-STRAIN:WBStrain00030553 | WormBase (WB) | WB | unknown | PMID:33313486 PMID:33458604 PMID:33693840 PMID:34156835 PMID:37008729 PMID:36595469 PMID:37170380 PMID:37590248 PMID:37777524 PMID:38596360 PMID:38488606 PMID:38771761 PMID:39712935 |
WB-STRAIN:PD1074 | 2026-08-15 09:31:21 | 11 | ||||
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PD2860 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030562 | Caenorhabditis elegans | pelo-1(cc2849) III; skih-2(cc2854) IV. | Made_by: Joshua Arribere|"Temperature-sensitive. Weakly fertile at 16C; sterile at 23C. Incomplete de-repression of nonstop mRNAs. Reference: Arribere, JA and Fire, AZ. Nonsense-mediated decay triggers SKI/pelota-dependent decay in a metazoan." | WBGene00008502(skih-2)|WBGene00011280(pelo-1) | WBGene00008502(skih-2), WBGene00011280(pelo-1) | WB-STRAIN:WBStrain00030562 | WormBase (WB) | WB | available | WB-STRAIN:PD2860, CGC_PD2860 | 2026-08-15 09:31:21 | 0 | |||
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PD2859 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030561 | Caenorhabditis elegans | unc-54(cc2859[unc-54::GFP::TAA::NSUTR]) I. | Endogenous unc-54::GFP made by CRISPR. Exhibits green thick muscle filaments in the body wall muscle. Weakly Unc. Reference: Arribere JA, Cenik ES, Jain N, Hess GT, Lee CH, Bassik MC, Fire AZ. Translation readthrough mitigation. Nature. 2016 Jun 30;534(7609):719-23. Epub 2016 Jun 1.|"Made_by: Joshua Arribere" | WBGene00006789(unc-54) | WBGene00006789(unc-54) | WB-STRAIN:WBStrain00030561 | WormBase (WB) | WB | available | WB-STRAIN:PD2859, CGC_PD2859 | 2026-08-15 09:31:21 | 0 | |||
|
PD3852 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00030568 | Caenorhabditis elegans | EMPTY | EMPTY | WBGene00004010(pha-1)|WBGene00006789(unc-54) | WBGene00004010(pha-1), WBGene00006789(unc-54) | WB-STRAIN:WBStrain00030568 | WormBase (WB) | WB | unknown | WB-STRAIN:PD3852 | 2026-08-15 09:31:21 | 0 |
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