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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SHRSP.SHR-(D1Got82-D1Rat97)/Izm Resource Report Resource Website |
RRID:RGD_329848962 | Rattus norvegicus | A subcongenic strain generated by backcrossing SHRSP.SHR-(D1Mgh5-D1Got87)/Izm (NBRP Rat No.0709, RGD:7411707) to SHRSP/Izm. A segment of the QTL region of chromosome 1 involved in salt-induced stroke (Niiya et al. Sci Rep. 2018; 8; 9403) has been exchanged. National BioResource Project for the Rat in Japan | 329848962 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 329848962 | 2026-09-12 01:25:41 | 0 | |||||
|
SS-Chr 3BN.SS-(D3Arb3-D3Rat93)( D3Rat78-D3Rat1).Il2rgem1/Mcwi Resource Report Resource Website |
RRID:RGD_155791431 | Rattus norvegicus | Immunodeficient congenic line developed by intercross of SS-Chr 3BN.SS-(D3Arb3-D3Rat93)( D3Rat78-D3Rat1)/Mcwi (RGD:155782880) withSS-Il2rgem1Mcwi (RGD:12790632) to breed the Il2rg (X-SCID) mutation into this background. Contact MCW rat distribution at [email protected] for availability. | 155791431 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791431 | 2026-09-12 01:25:41 | 0 | |||||
|
SS-Chr 3BN.SS-(D3Rat26-D3Mgh30).Il2rgem1/Mcwi Resource Report Resource Website |
RRID:RGD_155791432 | Rattus norvegicus | Immunodeficient congenic line developed by intercross of SS-Chr3BN.SS-(D3Rat26-D3Mgh30)/Mcwi(RGD:155782879) withSS-Il2rgem1Mcwi (RGD:12790632) to breed the Il2rg (X-SCID) mutation into this background. Contact MCW rat distribution at [email protected] for availability. | 155791432 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791432 | 2026-09-12 01:25:41 | 0 | |||||
|
SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1/Mcwi Resource Report Resource Website |
RRID:RGD_155791433 | Rattus norvegicus | Immunodeficient congenic line developed by intercross of SS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi(RGD:155782881) withSS-Il2rgem1Mcwi (RGD:12790632) to breed the Il2rg (X-SCID) mutation into this background. Contact MCW rat distribution at [email protected] for availability. | 155791433 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791433 | 2026-09-12 01:25:41 | 0 | |||||
|
SS-Chr 3BN.SS-(D3Rat222-D3Got42).Il2rgem1/Mcwi Resource Report Resource Website |
RRID:RGD_155791434 | Rattus norvegicus | Immunodeficient subcongenic line developed by intercross SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1Mcwi/Mcwi (RGD:155791433) heterozygous congenic, Il2rg null mutant (X-SCID) lines. . Contact MCW rat distribution at [email protected] for availability. | 155791434 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791434 | 2026-09-12 01:25:41 | 0 | |||||
|
SS-Chr 3BN.SS-(D3Rat26-D3Rat218).Il2rgem1/Mcwi Resource Report Resource Website |
RRID:RGD_155791436 | Rattus norvegicus | Immunodeficient subcongenic line developed by intercross SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1Mcwi/Mcwi (RGD:155791433) heterozygous congenic, Il2rg null mutant (X-SCID) lines. Contact MCW rat distribution at [email protected] for availability. | 155791436 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791436 | 2026-09-12 01:25:41 | 0 | |||||
|
LE;LEH-Ednrbsl/Kwb Resource Report Resource Website |
RRID:RGD_329849006 | Rattus norvegicus | LEH/Hkv (NBRP Rat No. 0802 aka. RGD:6480220) was resuscitated from frozen embryos and heterozygous male was obtained. The heterozygous male was mated with female Long-Evans rats (Crlj:LE), and the resulting offspring were deposited to NBRP. National BioResource Project for the Rat in Japan | 329849006 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2023-06-08) | 329849006 | 2026-09-12 01:25:41 | 0 | |||||
|
BBDR.BBDP-(Gimap1-Aoc1)/Ulund Resource Report Resource Website |
RRID:RGD_597830141 | Rattus norvegicus | This diabetic resistant congenic strain was developed by sister-brother breeding of heterozygote sBBM (BBDP.BBDR-(Zfp786-Aoc1)/Ulund, RGD:597830140 ). The congenic rat carries DP genome from Gimap1-Aoc1 where Gimap5 is located. Celiac Disease and Diabetes Unit, Lund University, Lund, Sweden | 597830141 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 597830141 | 2026-09-12 01:25:42 | 0 | |||||
|
SS-Chr3BN.SS-(D3Rat160-D3Rat218)/Mcwi Resource Report Resource Website |
RRID:RGD_155791427 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155791427 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791427 | 2026-09-12 01:25:42 | 0 | |||||
|
F344.W-np/Shi Resource Report Resource Website |
RRID:RGD_598154598 | Rattus norvegicus | In 1983, Wistar rats with pleural and ascites effusions and severe skin oedema were found at the Shionogi Pharmaceutical Co. The rats were named Nephrose Shionogi (NPS) because they showed nephrosis (F12). Breeding revealed that this phenotype was dominated by a autosomal recessive gene, np. NPS rats develop nephrosis at 4 weeks of age and die within 2 weeks. To prolong survival, NPS rats (np/+) were backcrossed with F344/Shi rats to generate the congenic strain (N12-13). National BioResource Project for the Rat in Japan | 598154598 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2025-04-30) | 598154598 | 2026-09-12 01:25:43 | 0 | |||||
|
SS-Chr3BN.SS-(D3Rat 86 to D3Rat218 )/Mcwi Resource Report Resource Website |
RRID:RGD_155791430 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155791430 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791430 | 2026-09-12 01:25:42 | 0 | |||||
|
LE.W-Tg(Dbh-tTA,-cre)2_7Fusa/Koba Resource Report Resource Website |
RRID:RGD_616336068 | Rattus norvegicus | This congenic strain was created by back crossing Long-Evans with The W-Tg(Dbh-tTA-2A-cre)2_7Fusa strain(RGD: 598092605) provided by Dr. Fusao Kato and Dr. Yukari Takahashi of the Jikei University School of Medicine. Background strain: Long-Evans (Institute for Animal Reproduction) Transgenes: DBH (rat), TetR (Escherichia coli), VP16 protein minimal "F"-type activation domain (Herpes simplex virus), 2A (Thosea asigna virus), Cre (P1 phage), bGlobin polyA (rabbit), loxP (P1 phage). National BioResource Project for the Rat in Japan | 616336068 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2025-05-14) | 616336068 | 2026-09-12 01:25:43 | 0 | |||||
|
SS.LEW-(D5Mco34-D5Rat108)/Jr Resource Report Resource Website |
RRID:RGD_1299873 | Rattus norvegicus | SS.LEW-(D5Rat130-D5Rat108)/Jr was selectively backcrossed with the SS strain | 1299873 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1299873 | 2026-09-12 01:25:05 | 0 | |||||
|
DA.F344-(D10Arb21-D10Arb22)/Arb Resource Report Resource Website |
RRID:RGD_631283 | Rattus norvegicus | This congenic substrain contains an F344 chromosome 10 segment transferred to a DA background. | 631283 | congenic | Rat Genome Database (RGD) | RGD | Extinct | 631283 | 2026-09-12 01:25:06 | 0 | |||||
|
F344.GK-(D1Arb42a-D1Rat90)/Swe Resource Report Resource Website |
RRID:RGD_631294 | Rattus norvegicus | This congenic strain carries a GK chromosome 1 segment defined by markers D1Arb42a and D1Rat90 transferred to the F344 background | 631294 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631294 | 2026-09-12 01:25:05 | 0 | |||||
|
SS.LEW-(D16Mit2-D16Rat12)/Ayd Resource Report Resource Website |
RRID:RGD_631585 | Rattus norvegicus | This congenic strain carries a LEW/NCrlBR chromosome 16 segment transferred to the SS/Jr background | 631585 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631585 | 2026-09-12 01:25:06 | 0 | |||||
|
SS.MNS-(D10M11Mit119-D10Mit11)/Jr Resource Report Resource Website |
RRID:RGD_631587 | Rattus norvegicus | This congenic strain is derived by introgressing a desired region of chr 10 from MNS to the SS/Jr recipient. | 631587 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631587 | 2026-09-12 01:25:05 | 0 | |||||
|
SS.LEW-(D1Mco2-D1Mco35)/Jr Resource Report Resource Website |
RRID:RGD_734481 | Rattus norvegicus | SS rats were crossed with LEW and the F1 rats were backcrossed to SS. Heterozygous rats with the chromosomal region of interest were selected and backcrossed for the next generation. This was done for eight generations and then the heterozygous animals were intercrossed. A 118 cM fragment of LEW chr 1 was introgressed into SS background. | 734481 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 734481 | 2026-09-12 01:25:06 | 0 | |||||
|
SS.LEW-(D1Rat42-D1Wox10)/Jr Resource Report Resource Website |
RRID:RGD_734483 | Rattus norvegicus | This is a congenic substrain derived from SS.LEW-(D1Mco2-D1Mco35)/Jr. A 43 cM fragment of LEW chr 1 was introgressed into SS background. | 734483 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 734483 | 2026-09-12 01:25:06 | 0 | |||||
|
F344.OLETF-(D7Mgh16-D7Mgh20)/Tj Resource Report Resource Website |
RRID:RGD_1302654 | Rattus norvegicus | Male OLETF was crossed with female F344. F1 were backcrossed to female F344 for 5 generations. Microsatellite-based genotyping was performed to select the best male that had the best OLETF donor genome. Once the region was fixed the resultant congenic strain was maintained by brother-sister mating.26.6 cM segment of the OLETF genome was transferred. National BioResource Project for the Rat in Japan | 1302654 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo | 1302654 | 2026-09-12 01:25:06 | 0 |
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