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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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frpr-2(sy1364) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051546 | Caenorhabditis elegans | frpr-2(sy1364) X. | Batch Strain object requested via get_NS_ids.pl|"Made_by: Heenam Park"|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of frpr-2. Universal 43 bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). left flanking sequence: GTTATGCGTGAGTGTGAATGCCTTCATGAGCCGATA right flanking sequence: GAGGGGTACGCGGGAGTTGCCAATCTGgtaagtatac inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: ACTCCCGCGTACCCCTCTAT Method Reference: G3 (Bethesda).2018 Nov 6;8(11):3607-3616" | WBGene00007346(frpr-2) | WBGene00007346(frpr-2) | WB-STRAIN:WBStrain00051546 | WormBase (WB) | WB | unknown | PMID:34741504 | 2026-09-05 04:57:11 | 0 | |||
|
frpr-8(sy1363) Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051545 | Caenorhabditis elegans | frpr-8(sy1363) | Batch Strain object requested via get_NS_ids.pl | WBGene00018728(frpr-8) | WBGene00018728(frpr-8) | WB-STRAIN:WBStrain00051545 | WormBase (WB) | WB | unknown | PMID:34741504 | 2026-09-05 04:57:11 | 0 | |||
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syEx1785 [Pfrpr-14::frpr-14 gDNA::SL2::GFP, Pnpr-9::mCherry-H2B, Pofm-1::RFP]; sy1301 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051549 | Caenorhabditis elegans | syEx1785 [Pfrpr-14::frpr-14 gDNA::SL2::GFP, Pnpr-9::mCherry-H2B, Pofm-1::RFP]; sy1301 | Batch Strain object requested via get_NS_ids.pl | WBGene00019496(frpr-14) | WBGene00019496(frpr-14) | WB-STRAIN:WBStrain00051549 | WormBase (WB) | WB | unknown | PMID:34741504 | 2026-09-05 04:57:11 | 0 | |||
|
unc-119(ox819 oxTi1126) III. Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00051652 | Caenorhabditis elegans | unc-119(ox819 oxTi1126) III. | oxTi1126 [mex-5p::Cas9(+smu-2 introns)::tbb-2 3'UTR + hsp-16.41p::Cre::tbb-2 3'UTR + myo-2p::2xNLS::cyOFP::let-858 3'UTR + lox2272] III. Knock-in into previously modified unc-119(ox819) endogenous locus. Cas9 insertion marked with myo-2p::cyOFP (cyan-excitable Orange Fluorescent Protein), a long-Stokes-shift fluorescent protein that is spectrally separable from common green and red fluorophores. The Cas9 transgene was optimized for germline expression by including 4 large PATC-rich introns from smu-2. Lower activity than other Cas9 strains, but useful because Cas9, Cre, and unc-119 are in a single unit. Reference: Schwartz ML, et al. High-efficiency CRISPR gene editing in C. elegans using Cas9 integrated into the genome. bioRxiv 2021.08.03.454883; doi: https: | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00051652 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 1 | ||||
|
unc-119(ox819) III; W03F9.11(oxTi1121) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051658 | Caenorhabditis elegans | unc-119(ox819) III; W03F9.11(oxTi1121) V. | oxTi1121 [mex-5p::Cas9(+smu-2 introns)::tbb-2 3'UTR + hsp-16.41p::Cre::tbb-2 3'UTR + lox2272]) V. The Cas9 transgene was optimized for germline expression by including 4 large PATC-rich introns from smu-2. Inserted into W03F9.11. Reference: Schwartz ML, et al. High-efficiency CRISPR gene editing in C. elegans using Cas9 integrated into the genome. bioRxiv 2021.08.03.454883; doi: https: | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00051658 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
|
W01A8.6(oxTi1128) I; unc-119(ox819) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051656 | Caenorhabditis elegans | W01A8.6(oxTi1128) I; unc-119(ox819) III. | oxTi1128 [mex-5p::Cas9(+smu-2 introns)::tbb-2 3'UTR + hsp-16.41p::Cre::tbb-2 3'UTR + myo-2p::2xNLS::cyOFP::let-858 3'UTR + lox2272]) I. Cas9 insertion marked with myo-2p::cyOFP (cyan-excitable Orange Fluorescent Protein), a long-Stokes-shift fluorescent protein that is spectrally separable from common green and red fluorophores. Inserted into W01A8.6. Reference: Schwartz ML, et al. High-efficiency CRISPR gene editing in C. elegans using Cas9 integrated into the genome. bioRxiv 2021.08.03.454883; doi: https: | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00051656 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
|
reSi7 I; unc-104(knu973[unc-104::AID]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051641 | Caenorhabditis elegans | reSi7 I; unc-104(knu973[unc-104::AID]) II. | Made_by: Cori K. Cahoon|"reSi7 [rgef-1p::TIR1::F2A::mTagBFP2::AID*::NLS::tbb-2 3'UTR] (I:-5.32). Neuronal-specific expression of TIR1 co-factor for AID, and tissue-specific AID-tagged blue protein in neuronal nuclei. Auxin-inducible degradation (AID) tag inserted at C-terminus of endogenous unc-104 locus by CRISPR/Cas9. Can be used for auxin-induced immobilization of worms for live imaging. Strain generated by crossing endogenously tagged unc-104::AID into DV3805. reSi7 is at -5.32 cM. References: Cahoon CK and Libuda DE. bioRxiv 2021.05.25.445686; doi: https:" | WBGene00006831(unc-104) | WBGene00006831(unc-104) | WB-STRAIN:WBStrain00051641 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:12 | 0 | ||||
|
wrdSi23 I; unc-18(knu969[unc-18::AID]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051640 | Caenorhabditis elegans | wrdSi23 I; unc-18(knu969[unc-18::AID]) X. | Made_by: Cori K. Cahoon|"wrdSi23 [eft-3p::TIR1:F2A:mTagBFP:tbb2 3' UTR:: loxP] I. wrdSi23 is inserted at ttTi4348 (I: -5.32 cM). Pan-somatic expression of TIR1 co-factor for AID, and expression of AID-tagged blue protein in somatic nuclei. Auxin-inducible degradation (AID) tag inserted at C-terminus of endogenous unc-18 locus by CRISPR/Cas9. Can be used for auxin-induced immobilization of worms for live imaging. References: Cahoon CK and Libuda DE. bioRxiv 2021.05.25.445686; doi: https:" | WBGene00006757(unc-18) | WBGene00006757(unc-18) | WB-STRAIN:WBStrain00051640 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:12 | 0 | ||||
|
his-72(cp76[mNeonGreen::3xFlag::his-72]) mpk-1(re172[mpk-1::mKate2::3xFlag]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051646 | Caenorhabditis elegans | his-72(cp76[mNeonGreen::3xFlag::his-72]) mpk-1(re172[mpk-1::mKate2::3xFlag]) III. | Green nuclei and ubiquitous cytosolic red expression, typically excluded from nuclei but with activity-dependent translocation into nuclei. Derived in an N2 background.C-terminally tagged mpk-1 is detectable by triplex PCR:mpk-1 genotyping FW: ACCAAAACAACCATGGGCTCGmpk-1 genotyping RV-1: GCTCCAAGTATGGGTGAGCCmpk-1 genotyping RV-2: GGTTCCCTCGTATGGCTTTCCReference: Neal R, et al. (2021). Nuclear translocation of tagged endogenous ERK/MPK-1 MAP Kinase denotes a subset of activation events in C. elegans development.|"Made_by: Neal Rasmussen" | WBGene00001946(his-72)|WBGene00003401(mpk-1) | WBGene00001946(his-72), WBGene00003401(mpk-1) | WB-STRAIN:WBStrain00051646 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:12 | 0 | ||||
|
unc-11(vg103[unc-11::GFP]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051645 | Caenorhabditis elegans | unc-11(vg103[unc-11::GFP]) I. | Superficially wild-type. Endogenously-tagged UNC-11::GFP is expressed in most, if not all, neurons, epithelial cells and coelomocytes, and should be visible in the nerve ring through a dissecting scope.. | WBGene00006751(unc-11) | WBGene00006751(unc-11) | WB-STRAIN:WBStrain00051645 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:12 | 0 | ||||
|
orn-1(tm5454) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051644 | Caenorhabditis elegans | orn-1(tm5454) III. | Reference: Bailly AP, et al. Cell Rep. 2019 Oct 1;29(1):212-224.e8. doi: 10.1016/j.celrep.2019.08.070. PMID: 31577950 | WBGene00015814(oatr-1) | WBGene00015814(oatr-1) | WB-STRAIN:WBStrain00051644 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:12 | 0 | ||||
|
ral-1(re218[mKate2::3xFlag::ral-1]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051649 | Caenorhabditis elegans | ral-1(re218[mKate2::3xFlag::ral-1]) III. | Made_by: Hanna Shin|"Ubiquitous expression and localization to plasma membranes. Derived in an N2 background. TD185 5 -GCCGGAAGAGTGATGAACCC- 3 TD186 5 -TAATGAGCTCGGAGACCATGGC- 3TD187 5 -CGCACCTCATCATACATGAACTGC- 3 Reference: Shin H, et al. Cell Rep. 2018 Sep 4;24(10):2669-2681. PMID: 30184501" | WBGene00021811(ral-1) | WBGene00021811(ral-1) | WB-STRAIN:WBStrain00051649 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
|
wrdSi23 I; unc-104(knu973[unc-104::AID]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051639 | Caenorhabditis elegans | wrdSi23 I; unc-104(knu973[unc-104::AID]) II. | Made_by: Cori K. Cahoon|"Supplementary_genotype wrdSi23 [eft-3p::TIR1:F2A:mTagBFP:tbb2 3' UTR:: loxP] I; unc-104(knu973[unc-104::AID]) II"|"wrdSi23 [eft-3p::TIR1:F2A:mTagBFP:tbb2 3' UTR:: loxP] I. wrdSi23 is inserted at ttTi4348 (I: -5.32 cM). Pan-somatic expression of TIR1 co-factor for AID, and expression of AID-tagged blue protein in somatic nuclei. Auxin-inducible degradation (AID) tag inserted at C-terminus of endogenous unc-104 locus by CRISPR/Cas9. Can be used for auxin-induced immobilization of worms for live imaging. References: Cahoon CK and Libuda DE. bioRxiv 2021.05.25.445686; doi: https:" | WBGene00006831(unc-104) | WBGene00006831(unc-104) | WB-STRAIN:WBStrain00051639 | WormBase (WB) | WB | unknown | PMID:37651423 | 2026-09-05 04:57:12 | 0 | |||
|
ccdc-47(utx31[mNG::3xFlag::ccdc-47]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051690 | Caenorhabditis elegans | ccdc-47(utx31[mNG::3xFlag::ccdc-47]) III. | Made_by: Anita Rhodes (Glow Worms '20)|"N-terminal tag of CCDC-47 via CRISPR/Cas9 knock-in of mNeonGreen at ccdc-47 locus. Insertion verified by PCR, Sanger sequencing, and fluorescence. Left flank: 5' gttaaatcactcaatttcgggtcgttcacc 3'; Right flank: 5' ATGAAGATAGTATGGATTTTCCTAATATTC 3' (3 silent mutations); sgRNA: cgttcaccATGAAAATCGTC; Cas9/sgRNA plasmid: pGLOW13; mNG^SEC^3xFlag plasmid: pGLOW17; SEC insertion allele strain (balanced): GLW38." | WBGene00014204(ccdc-47) | WBGene00014204(ccdc-47) | WB-STRAIN:WBStrain00051690 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
|
hsp-4(utx39[hsp-4::mNG::3xFlag]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051694 | Caenorhabditis elegans | hsp-4(utx39[hsp-4::mNG::3xFlag]) II. | C-terminal tag of HSP-4 via CRISPR/Cas9 knock-in of mNeonGreen at hsp-4 locus. Insertion verified by PCR and fluorescence. Left flank: 5' TCGGCCGGAGGACAAGGAGAACAAGCTTCTGAGGAGCCATCGGAGGATCATGATGAACTG 3' (1 silent mutation); Right flank: 5' TAAaatattaattgccttcaactacttgct 3'; sgRNA: CGTCTCCAAACTTTACTCGG; Cas9/sgRNA plasmid: pGLOW44; mNG^SEC^3xFlag plasmid: pGLOW61; SEC insertion allele strain: GLW46.|"Made_by: Quincy Martin (Glow Worms '21)" | WBGene00002008(hsp-4) | WBGene00002008(hsp-4) | WB-STRAIN:WBStrain00051694 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
|
ZK1058.9(utx37[ZK1058.9::mNG::3xFlag]) III Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051693 | Caenorhabditis elegans | ZK1058.9(utx37[ZK1058.9::mNG::3xFlag]) III | C-terminal tag of ZK1058.9 via CRISPR/Cas9 knock-in of mNeonGreen at ZK1058.9 locus. Insertion verified by PCR and fluorescence. Left flank: 5' AGCTCAACGGCTAGCTGGTCTCGTTATTAT 3' (1 silent mutation); Right flank: 5' TAAtgaattttcctccaacttttgtcctct 3'; sgRNA: AATAACGAGACCAGCTAG (18 bp); Cas9/sgRNA plasmid: pGLOW58; mNG^SEC^3xFlag plasmid: pGLOW68; SEC insertion allele strain: GLW44.|"Made_by: Dan Tatulescu (Glow Worms '21)" | WB-STRAIN:WBStrain00051693 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||||
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edc-3(utx35[mNG::3xFlag::edc-3]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051692 | Caenorhabditis elegans | edc-3(utx35[mNG::3xFlag::edc-3]) I. | Made_by: Diya Sharma (Glow Worms '21)|"N-terminal tag of EDC-3 via CRISPR/Cas9 knock-in of mNeonGreen at edc-3 locus. Insertion verified by PCR and fluorescence. Left flank: 5' ggttccaattcttctgatttcaaattaaaa 3'; Right flank: 5' ATGGATGACAAACTCATTGGAAGCGTCATCTCTACGGAGACAAAGGACGG 3' (7 silent mutations); sgRNA: ATATCAACCGAAACTAAAGA; Cas9/sgRNA plasmid: pGLOW81; mNG^SEC^3xFlag plasmid: pGLOW103; SEC insertion allele strain: GLW42." | WBGene00011036(edc-3) | WBGene00011036(edc-3) | WB-STRAIN:WBStrain00051692 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
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nhr-8(utx33[mNG::3xFlag::nhr-8]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051691 | Caenorhabditis elegans | nhr-8(utx33[mNG::3xFlag::nhr-8]) IV. | Made_by: Gillian Witten (Glow Worms '21)|"N-terminal tag of NHR-8 via CRISPR/Cas9 knock-in of mNeonGreen at nhr-8 locus. Insertion verified by PCR and Sanger sequencing. Left flank: 5' taatcactaaaacaaaaatttcgtcattcc 3'; Right flank: 5' ATGCCTTCGTCTTCTCCATCGATGGACGAG 3'; sgRNA: CGATGGAGAAGACGAAGGCA; Cas9/sgRNA plasmid: pGLOW55; mNG^SEC^3xFlag plasmid: pGLOW56; SEC insertion allele strain: GLW40." | WBGene00003607(nhr-8) | WBGene00003607(nhr-8) | WB-STRAIN:WBStrain00051691 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
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sod-2(utx53[mScarlet::3xMyc::sod-2]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051698 | Caenorhabditis elegans | sod-2(utx53[mScarlet::3xMyc::sod-2]) I. | Made_by: Param Kapoor (Glow Worms '21)|"N-terminal tag of SOD-2 via CRISPR/Cas9 knock-in of mScarlet at sod-2 locus. Insertion verified by PCR and fluorescence. Left flank: 5' attgaatattttaattatttgcagccgaaa 3'; Right flank: 5' ATGCTTCAAAACACGGTTCGCTGTGTCTCA 3 (1 silent mutation); sgRNA: AAGCTTTGAGACACAGCGAA; Cas9/sgRNA plasmid: pGLOW98; mScarlet^SEC^3xMyc plasmid: pGLOW111; SEC insertion allele strain: GLW64." | WBGene00004931(sod-2) | WBGene00004931(sod-2) | WB-STRAIN:WBStrain00051698 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 | ||||
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pqn-59(utx51[mNG::3xFlag::pqn-59]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051697 | Caenorhabditis elegans | pqn-59(utx51[mNG::3xFlag::pqn-59]) I. | Made_by: Persephone Alicea (Glow Worms '20)|"N-terminal tag of PQN-59 via CRISPR/Cas9 knock-in of mNeonGreen at pqn-59 locus. Insertion verified by PCR and fluorescence. Left flank: 5' gaccctttttatttataatttgttttcaga 3'; Right flank: 5' ATGGGTATTAAAGGCGACAAAAAAGCTACT 3 (1 silent mutation); sgRNA: TGCAAGTCGCGCTTGATCGC; Cas9/sgRNA plasmid: pGLOW23; mNG^SEC^3xFlag plasmid: pGLOW24; SEC insertion allele strain (balanced): GLW62." | WBGene00004143(pqn-59) | WBGene00004143(pqn-59) | WB-STRAIN:WBStrain00051697 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:13 | 0 |
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