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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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ujIs113 II; hbl-1(dev198([hbl-1::mNeonGreen]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052012 | Caenorhabditis elegans | ujIs113 II; hbl-1(dev198([hbl-1::mNeonGreen]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of hbl-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001824(hbl-1) | WBGene00001824(hbl-1) | WB-STRAIN:WBStrain00052012 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; egl-13(dev199([egl-13::mNeonGreen]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052013 | Caenorhabditis elegans | ujIs113 II; egl-13(dev199([egl-13::mNeonGreen]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of egl-13 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001182(egl-13) | WBGene00001182(egl-13) | WB-STRAIN:WBStrain00052013 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
he317[eft-3p::Lox2272::egl-13-NLS::tagBFP2::let-858 3'UTR::Lox2272::egl-13-NLS::mCherry::let-858 3'UTR] IV; heSi220 X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051962 | Caenorhabditis elegans | he317[eft-3p::Lox2272::egl-13-NLS::tagBFP2::let-858 3'UTR::Lox2272::egl-13-NLS::mCherry::let-858 3'UTR] IV; heSi220 X. | heSi220 [lin-31p::Cre] X. Vulval lineage is marked through activity of a Cre-dependent reporter (blue-to-red switch). All cells in the animal are expressing BFP, except for vulval cells which are expressing mCherry. he317 was inserted into the cxTi10816 site using CRISPR/Cas9. Reference: van der Vaart A, et al. Sci. Adv. 2020 May; 6(21): eaay3823. PMID: 32494730. | WBGene00001182(egl-13)|WBGene00002957(let-858) | WBGene00001182(egl-13), WBGene00002957(let-858) | WB-STRAIN:WBStrain00051962 | WormBase (WB) | WB | unknown | WormBase | 2026-10-10 11:02:37 | 0 | ||||
|
let-381(dev205([mNeonGreen::let-381]) I; ujIs113 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052018 | Caenorhabditis elegans | let-381(dev205([mNeonGreen::let-381]) I; ujIs113 II. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of let-381 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00002601(let-381) | WBGene00002601(let-381) | WB-STRAIN:WBStrain00052018 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
heIs12. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051960 | Caenorhabditis elegans | heIs12. | heIs12 [myo-3p::cyd-1 + myo-3p::cdk-4::Venus + myo-3p::GFP::H2B]. Expression of CYD-1, CDK-4::VENUS, and GFP::H2B in body wall muscles (BWM). Over-expression of tagged CYD-1 and tagged CDK-4 from integrated transgene causes incidental extra BWM nuclei. Expression levels are lower that those from heIs9 in SV857. Reference: Korzelius J, et al. PLoS Genet. 2011 Nov;7(11):e1002362. PMID: 22102824 | WB-STRAIN:WBStrain00051960 | WormBase (WB) | WB | unknown | WormBase | 2026-10-10 11:02:37 | 0 | ||||||
|
ujIs113 II; ets-5(dev200([ets-5::mNeonGreen]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052014 | Caenorhabditis elegans | ujIs113 II; ets-5(dev200([ets-5::mNeonGreen]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of ets-5 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00016600(ets-5) | WBGene00016600(ets-5) | WB-STRAIN:WBStrain00052014 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; unc-3(ot837([unc-3::mNeonGreen::AID]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051965 | Caenorhabditis elegans | ujIs113 II; unc-3(ot837([unc-3::mNeonGreen::AID]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of unc-3 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00006743(unc-3) | WBGene00006743(unc-3) | WB-STRAIN:WBStrain00051965 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; ttx-1(dev201([ttx-1::mNeonGreen]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052015 | Caenorhabditis elegans | ujIs113 II; ttx-1(dev201([ttx-1::mNeonGreen]) V. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of ttx-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00006652(ttx-1) | WBGene00006652(ttx-1) | WB-STRAIN:WBStrain00052015 | WormBase (WB) | WB | unknown | PMID:34312566 PMID:38555276 |
WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; skn-1(hq82([skn-1::gfp]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051964 | Caenorhabditis elegans | ujIs113 II; skn-1(hq82([skn-1::gfp]) IV. | GFP knockin at C-terminus of skn-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1.|"Processed manually from the January AFP strain emails that failed parsing" | WBGene00004804(skn-1) | WBGene00004804(skn-1) | WB-STRAIN:WBStrain00051964 | WormBase (WB) | WB | unknown | PMID:34312566 PMID:39169052 |
WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; lin-1(dev202([lin-1::mNeonGreen]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052016 | Caenorhabditis elegans | ujIs113 II; lin-1(dev202([lin-1::mNeonGreen]) IV. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of lin-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00002990(lin-1) | WBGene00002990(lin-1) | WB-STRAIN:WBStrain00052016 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; Y75B8A.6(dev31([gfp::Y75B8A.6]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051963 | Caenorhabditis elegans | ujIs113 II; Y75B8A.6(dev31([gfp::Y75B8A.6]) III. | GFP knockin at N-terminus of Y75B8A.6 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1.|"Processed manually from the January AFP strain emails that failed parsing" | WB-STRAIN:WBStrain00051963 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||||
|
ujIs113 II; elt-2(dev99([mNeonGreen::elt-2]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051969 | Caenorhabditis elegans | ujIs113 II; elt-2(dev99([mNeonGreen::elt-2]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of elt-2 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001250(elt-2) | WBGene00001250(elt-2) | WB-STRAIN:WBStrain00051969 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; lin-32(dev70([mNeonGreen::lin-32]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051967 | Caenorhabditis elegans | ujIs113 II; lin-32(dev70([mNeonGreen::lin-32]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of lin-32 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00003018(lin-32) | WBGene00003018(lin-32) | WB-STRAIN:WBStrain00051967 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; ceh-28(dev192([mNeonGreen::ceh-28]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052007 | Caenorhabditis elegans | ujIs113 II; ceh-28(dev192([mNeonGreen::ceh-28]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ceh-28 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00000450(ceh-28) | WBGene00000450(ceh-28) | WB-STRAIN:WBStrain00052007 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; ceh-23(dev193([mNeonGreen::ceh-23]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052008 | Caenorhabditis elegans | ujIs113 II; ceh-23(dev193([mNeonGreen::ceh-23]) III. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ceh-23 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00000446(ceh-23) | WBGene00000446(ceh-23) | WB-STRAIN:WBStrain00052008 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
ujIs113 II; egl-46(dev194([mNeonGreen::egl-46]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052009 | Caenorhabditis elegans | ujIs113 II; egl-46(dev194([mNeonGreen::egl-46]) V. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of egl-46 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001210(egl-46) | WBGene00001210(egl-46) | WB-STRAIN:WBStrain00052009 | WormBase (WB) | WB | unknown | PMID:34312566 PMID:38555276 |
WormBase | 2026-10-10 11:02:38 | 0 | |||
|
cfi-1(dev183([mNeonGreen::cfi-1]) I; ujIs113 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052003 | Caenorhabditis elegans | cfi-1(dev183([mNeonGreen::cfi-1]) I; ujIs113 II. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of cfi-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00000476(cfi-1) | WBGene00000476(cfi-1) | WB-STRAIN:WBStrain00052003 | WormBase (WB) | WB | unknown | PMID:34312566 | WormBase | 2026-10-10 11:02:38 | 0 | |||
|
madf-9(st12324[madf-9::TY1::EGFP::3xFLAG]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051954 | Caenorhabditis elegans | madf-9(st12324[madf-9::TY1::EGFP::3xFLAG]) IV. | CRISPR/Cas9 engineered tagged endogenous locus.|"Made_by: DKV/EF" | WBGene00022608(madf-9) | WBGene00022608(madf-9) | WB-STRAIN:WBStrain00051954 | WormBase (WB) | WB | unknown | WormBase | 2026-10-10 11:02:37 | 0 | ||||
|
ujIs113 II; elt-6(dev188([mNeonGreen::elt-6]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052004 | Caenorhabditis elegans | ujIs113 II; elt-6(dev188([mNeonGreen::elt-6]) IV. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of elt-6 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001253(elt-6) | WBGene00001253(elt-6) | WB-STRAIN:WBStrain00052004 | WormBase (WB) | WB | unknown | PMID:34312566 PMID:39405353 |
WormBase | 2026-10-10 11:02:38 | 0 | |||
|
madf-8(st12322[madf-8::TY1::EGFP::3xFLAG]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051953 | Caenorhabditis elegans | madf-8(st12322[madf-8::TY1::EGFP::3xFLAG]) III. | CRISPR/Cas9 engineered tagged endogenous locus.|"Made_by: DKV/EF" | WBGene00008118(madf-8) | WBGene00008118(madf-8) | WB-STRAIN:WBStrain00051953 | WormBase (WB) | WB | unknown | WormBase | 2026-10-10 11:02:37 | 0 |
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