Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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pon2fh450 (AB) Resource Report Resource Website |
RRID:ZIRC_ZL13418 | Danio rerio | Allele with one point mutation | pon2fh450 (AB) | fh450 | ZL13418 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | ||||
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sec61a1hi1058Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL774 | Danio rerio | Transgenic Insertion | cartilage element, cell division, cerebellum, chondrocyte, columnar/cuboidal epithelial cell, dorsal habenular nucleus, eye, gut, habenula, habenula development, head, heart, hyomandibula, innervation, liver, mandibular arch skeleton, neuroepithelial cell, neurogenesis, neuromast development, otolith, pericardium, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7 skeleton, posterior lateral line neuromast, post-vent region, sensory perception of touch, sensory system, third ventricle, trunk, whole organism cartilage element, cell division (all 31) | sec61a1hi1058Tg/+ (AB) | hi1058Tg | ZL774 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
fancmhg61 (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14476 | Danio rerio | Allele with one insertion | female organism, female sex determination, male organism, male sex determination female organism, female sex determination (all 4) | fancmhg61 (AB) | hg61 | ZL14476 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
fanclhg58 (AB) Resource Report Resource Website |
RRID:ZIRC_ZL14475 | Danio rerio | Allele with one insertion | female organism, female sex determination, male organism, male sex determination female organism, female sex determination (all 4) | fanclhg58 (AB) | hg58 | ZL14475 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
sox9bfh313/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL2063 | Danio rerio | Allele with one point mutation | atrioventricular valve formation, basal plate cartilage, bile canaliculus, branchiostegal ray, ceratobranchial 5 bone, ceratobranchial cartilage, ceratohyal bone, ceratohyal cartilage, cleithrum, dentary, digestive system duct, dorsal root ganglion, endocrine pancreas, entopterygoid, ethmoid cartilage, exocrine pancreas development, fin fold actinotrichium, gall bladder, gallbladder development, head, heart, heart looping, hepaticobiliary system development, hepatocyte, hyomandibula, hyosymplectic cartilage, intrahepatic bile duct, intrahepatic bile duct development, iridophore, liver, maxilla, Meckel''s cartilage, melanocyte, neurocranial trabecula, Notch signaling pathway, occipital arch cartilage, opercle, otic vesicle, palatoquadrate cartilage, pancreas, pancreatic duct, parasphenoid, pectoral fin endoskeletal disc, pericardium, post-vent region, primary islet, proepicardial cluster, retroarticular, type B pancreatic cell differentiation, whole organism atrioventricular valve formation, basal plate cartilage (all 50) | sox9bfh313/+ (AB) | fh313 | ZL2063 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
actl6ahi1072Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1075 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, gut, head, heart, liver, pericardium, whole organism, yolk brain, central nervous system (all 10) | actl6ahi1072Tg/+ (AB) | hi1072Tg | ZL1075 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
terfahi1182Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL770 | Danio rerio | Transgenic Insertion | terfahi1182Tg/+ (AB) | hi1182Tg | ZL770 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | ||||
|
hnf1bahi1843Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL768 | Danio rerio | Transgenic Insertion | anatomical system, anterior commissure, atrioventricular node, cardiac conduction system development, cardiac ventricle, cranial nerve II, digestive tract morphogenesis, endocrine pancreas, endoderm, endoderm development, eye, forebrain, gut, hair cell, head, hepaticobiliary system development, hepatocyte, hindbrain, hindbrain development, hindbrain morphogenesis, inner ear, intestinal bulb, intrahepatic bile duct, islet, kidney, liver, liver development, otic vesicle, otolith, pancreas, pancreas development, pancreatic B cell, pancreatic bud, pericardium, postoptic commissure, pronephric nephron tubule development, pronephric tubule, pronephros, regionalization, regulation of cardiac muscle contraction, rhombomere 4, rhombomere 5, rhombomere 6, semicircular canal, swim bladder, tube formation, type B pancreatic cell development anatomical system, anterior commissure (all 47) | hnf1bahi1843Tg/+ (AB) | hi1843Tg | ZL768 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
mcm2hi1244Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1173 | Danio rerio | Transgenic Insertion | brain, central nervous system, endocrine pancreas, eye, gut, head, heart, Kupffer''s vesicle, lateral plate mesoderm, liver, pharyngeal arch 3-7, pronephric duct, retina, thymus, trunk, whole organism brain, central nervous system (all 16) | mcm2hi1244Tg/+ (AB) | hi1244Tg | ZL1173 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
odc1hi1841bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1172 | Danio rerio | Transgenic Insertion | eye, gut, head, liver, retinal photoreceptor layer eye, gut (all 5) | odc1hi1841bTg/+ (AB) | hi1841bTg | ZL1172 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
sox9ahi1134Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1056 | Danio rerio | Transgenic Insertion | basal plate cartilage, basihyal cartilage, cartilage development, ceratobranchial 5 bone, ceratobranchial bone, ceratobranchial cartilage, ceratohyal bone, ceratohyal cartilage, chondrocyte, coracoid, cranial cartilage, cranial skeletal system development, dentary, embryonic viscerocranium morphogenesis, entopterygoid, ethmoid cartilage, gut, head, hyomandibula, hyosymplectic cartilage, liver, mandibular arch skeleton, maxilla, Meckel''s cartilage, neurocranial trabecula, neurocranium, opercle, otic vesicle, palatoquadrate arch, palatoquadrate cartilage, parachordal cartilage, pectoral fin, pharyngeal arch 1, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, retroarticular, scapulocoracoid, splanchnocranium, statoacoustic (VIII) ganglion, whole organism basal plate cartilage, basihyal cartilage (all 41) | sox9ahi1134Tg/+ (AB) | hi1134Tg | ZL1056 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
polr1chi1124Tg/+ (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL1176 | Danio rerio | Transgenic Insertion | cartilage development, ceratobranchial 5 tooth, ceratobranchial cartilage, ceratohyal cartilage, cranial cartilage, cranium, ethmoid cartilage, eye, gut, head, heart, liver, mandibular arch skeleton, Meckel''s cartilage, midbrain hindbrain boundary, neural crest cell fate specification, neuroepithelial cell, opercle, ossification, palate, palatoquadrate cartilage, parasphenoid, pericardium, pharyngeal arch, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7, pharyngeal arch cartilage, ribosome biogenesis, rRNA transcription, swim bladder, ventral mandibular arch cartilage development, ceratobranchial 5 tooth (all 32) | polr1chi1124Tg/+ (AB) | hi1124Tg | ZL1176 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 1 | |||
|
cct3hi1867Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1045 | Danio rerio | Transgenic Insertion | brain, central nervous system, extension, eye, gut, head, heart, liver, myotome, nervous system, optic tectum, retina, sensory system, skeletal muscle, skeletal muscle cell, yolk brain, central nervous system (all 16) | cct3hi1867Tg/+ (AB) | hi1867Tg | ZL1045 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
atp6v0cahi1207Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1044 | Danio rerio | Transgenic Insertion | brain, cell, cellular senescence, central nervous system, embryonic retina morphogenesis in camera-type eye, eye, eye photoreceptor cell, eye pigmentation, fin, gut, head, larval melanophore stripe, liver, melanocyte, melanocyte differentiation, nervous system, notochord, notochord cell vacuolation, notochord morphogenesis, pectoral fin, pigmentation, pigment cell, retinal pigmented epithelium, retina morphogenesis in camera-type eye, surface structure, whole organism brain, cell (all 26) | atp6v0cahi1207Tg/+ (AB) | hi1207Tg | ZL1044 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
hdac1hi1618Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL540 | Danio rerio | Transgenic Insertion | atrium, blood, blood circulation, brain, bulbus arteriosus, cardiac ventricle, cartilage element, caudal fin, ceratobranchial cartilage, ceratohyal cartilage, ciliary marginal zone, CNS neuron (sensu Vertebrata), cranial cartilage, dorsal root ganglion, embryo development, endocrine cell, endodermal cell, exocrine pancreas, exocrine pancreas development, extension, eye, facial nerve motor nucleus, forebrain ventricle, gut, hatching, head, heart, heart contraction, heart looping, hematopoietic stem cell differentiation, hindbrain, hindbrain development, hyosymplectic cartilage, lens, liver, liver development, mandibular arch skeleton, Meckel''s cartilage, melanocyte, melanocyte differentiation, melanocyte migration, melanophore stripe, motor neuron, nervous system, neuromast development, neuron migration, notochord, optic fissure, optic tectum, otic vesicle, otolith, palatoquadrate cartilage, pancreas, pancreatic acinar gland, pectoral fin, pectoral fin cartilage, pericardium, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pigmentation, pigment cell, posterior lateral line neuromast, post-vent region, presumptive bulbus arteriosus, regulation of cell cycle, retina, retina layer formation, retinal neural layer, retinal pigmented epithelium, retina morphogenesis in camera-type eye, rhombomere boundary formation, secondary heart field specification, smooth muscle, snout, somite, statoacoustic (VIII) ganglion, swim bladder, thymus primordium, trunk, ventral wall of dorsal aorta, whole organism, yolk atrium, blood (all 84) | hdac1hi1618Tg/+ (AB) | hi1618Tg | ZL540 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
smohi229Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL497 | Danio rerio | Transgenic Insertion | adenohypophyseal placode, anterior commissure, anterior macula, atrium, axon guidance, brain, cardiac ventricle, caudal commissure, caudal fin, cell death, cell population proliferation, cellular senescence, cerebellum, cleithrum, commissural neuron axon guidance, common cardinal vein, cranial nerve II, diencephalon development, dopaminergic neuron, embryo development, endocardium development, endocrine cell, eye, fast muscle cell, floor plate, floor plate development, floor plate formation, forebrain, forebrain dorsal/ventral pattern formation, head, heart, heart primordium, hindbrain, inner ear, inner ear development, inner ear morphogenesis, intestine, Kupffer''s vesicle, lapillus, lateral floor plate, liver, liver development, macula, mandibular arch skeleton, medial floor plate, mesothelial cell, midbrain, midbrain hindbrain boundary, muscle cell differentiation, muscle pioneer, myoseptum, myotome, nervous system, oligodendrocyte development, oligodendrocyte differentiation, optic chiasm, optic stalk, otolith, pancreas, pancreas development, pancreas primordium, pars superior ear, pectoral fin, pericardium, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pillar of the anterior semicircular canal, positive regulation of DNA-templated transcription, posterior macula, postoptic commissure, post-vent region, primary motor neuron, proctodeum, retina development in camera-type eye, retinal ganglion cell, Rohon-Beard neuron, roof plate spinal cord region, sagitta, secondary motor neuron, segmental plate, sensory neuron, sensory system, skeletal muscle tissue development, slow muscle cell, smoothened signaling pathway, smooth muscle, somite, spinal cord, supraoptic commissure, surface structure, swim bladder, swim bladder development, swim bladder formation, tela chorioidea, trunk, vasculogenesis, ventral mesenchyme, ventral thalamus, ventricular system, whole organism, yolk adenohypophyseal placode, anterior commissure (all 101) | smohi229Tg/+ (AB) | hi229Tg | ZL497 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
clint1ahi1520Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL9700 | Danio rerio | Transgenic Insertion | apoptotic chromosome condensation, caudal fin, cell death, cellular senescence, dorsal fin fold, epidermis, epithelial cell proliferation, eye, gut, head, heart, inflammatory response, integument, leukocyte migration involved in inflammatory response, liver, neutrophil chemotaxis, pericardium, peridermal cell, surface structure, trunk, ventral fin fold, whole organism, yolk apoptotic chromosome condensation, caudal fin (all 23) | clint1ahi1520Tg/+ (AB) | hi1520Tg | ZL9700 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:24 | 0 | |||
|
gpc4hi1934Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL539 | Danio rerio | Transgenic Insertion | adaxial cell, anterior neural plate, anterior-posterior polarized posterior lateral line neuromast, axis, axis elongation, cell, cell migration involved in gastrulation, cell morphogenesis, ceratobranchial 5 bone, ceratohyal cartilage, chondrocyte, convergent extension, convergent extension involved in axis elongation, convergent extension involved in gastrulation, cranial cartilage, dorsal convergence, dorsal lateral line neuromast, dorsal-ventral polarized posterior lateral line neuromast, endochondral bone, endochondral ossification, endoderm, endothelial cell, ethmoid cartilage, extension, eye, floor plate, forebrain, glycosaminoglycan metabolic process, head, head muscle, hypophyseal fenestra, interhyal cartilage, intermandibularis, Kupffer''s vesicle, mandibular arch skeleton, maxilla, Meckel''s cartilage, mesodermal cell migration, muscle cell migration, myotome, neural keel, neurocranial trabecula, notochord, notochord formation, notochord morphogenesis, notochord posterior region, ossification, palate, palatoquadrate cartilage, pancreas development, pancreatic bud, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, post-anal tail morphogenesis, posterior lateral line neuromast primordium migration, posterior lateral line primordium, post-vent region, prechordal plate, pronephric duct, quadrate, quadrate-anguloarticular joint, retroarticular, rhombomere, slow muscle cell, somite, striated muscle cell development, symplectic, trunk, ventral fin fold, whole organism adaxial cell, anterior neural plate (all 70) | gpc4hi1934Tg/+ (AB) | hi1934Tg | ZL539 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
capzbhi1858bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1097 | Danio rerio | Transgenic Insertion | epidermal cell, ethmoid cartilage, eye, fin, head, head muscle, integument, Meckel''s cartilage, melanocyte, melanocyte migration, neural crest cell migration, palate, pectoral fin, roof of mouth development, skeletal muscle, skeletal muscle cell, surface structure, ventral mandibular arch epidermal cell, ethmoid cartilage (all 18) | capzbhi1858bTg/+ (AB) | hi1858bTg | ZL1097 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:25 | 0 | |||
|
sec61a1hi2839bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1082 | Danio rerio | Transgenic Insertion | cartilage element, cell division, cerebellum, chondrocyte, columnar/cuboidal epithelial cell, dorsal habenular nucleus, eye, gut, habenula, habenula development, head, heart, hyomandibula, innervation, liver, mandibular arch skeleton, neuroepithelial cell, neurogenesis, neuromast development, otolith, pericardium, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7 skeleton, posterior lateral line neuromast, post-vent region, sensory perception of touch, sensory system, third ventricle, trunk, whole organism cartilage element, cell division (all 31) | sec61a1hi2839bTg/+ (AB) | hi2839bTg | ZL1082 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | ZIRC | 2026-10-24 12:07:26 | 0 |
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