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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00047055
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:25783854
Synonyms: EMPTY
Notes: Whole genomic DNA extraction was carried out on single worm. Flow cell preparation and paired end read sequencing were carried out on GAIIx and HiSeq2000 sequencers (Illumina Inc, San Diego CA). Sequence reads were aligned with the bwa and stampy aligner and genotypes were called with GenomeAnalysisTK(Van der Auwera et al. 2002)
Proper citation: RRID:WB-STRAIN:WBStrain00047055 Copy
http://www.wormbase.org/db/get?name=WBStrain00047049
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:25783854
Synonyms: EMPTY
Notes: Whole genomic DNA extraction was carried out on single worm. Flow cell preparation and paired end read sequencing were carried out on GAIIx and HiSeq2000 sequencers (Illumina Inc, San Diego CA). Sequence reads were aligned with the bwa and stampy aligner and genotypes were called with GenomeAnalysisTK(Van der Auwera et al. 2002)
Proper citation: RRID:WB-STRAIN:WBStrain00047049 Copy
http://www.wormbase.org/db/get?name=WBStrain00047050
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:25783854
Synonyms: EMPTY
Notes: Whole genomic DNA extraction was carried out on single worm. Flow cell preparation and paired end read sequencing were carried out on GAIIx and HiSeq2000 sequencers (Illumina Inc, San Diego CA). Sequence reads were aligned with the bwa and stampy aligner and genotypes were called with GenomeAnalysisTK(Van der Auwera et al. 2002)
Proper citation: RRID:WB-STRAIN:WBStrain00047050 Copy
http://www.wormbase.org/db/get?name=WBStrain00047051
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:25783854
Synonyms: EMPTY
Notes: Whole genomic DNA extraction was carried out on single worm. Flow cell preparation and paired end read sequencing were carried out on GAIIx and HiSeq2000 sequencers (Illumina Inc, San Diego CA). Sequence reads were aligned with the bwa and stampy aligner and genotypes were called with GenomeAnalysisTK(Van der Auwera et al. 2002)
Proper citation: RRID:WB-STRAIN:WBStrain00047051 Copy
http://www.wormbase.org/db/get?name=WBStrain00047053
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:25783854
Synonyms: EMPTY
Notes: Whole genomic DNA extraction was carried out on single worm. Flow cell preparation and paired end read sequencing were carried out on GAIIx and HiSeq2000 sequencers (Illumina Inc, San Diego CA). Sequence reads were aligned with the bwa and stampy aligner and genotypes were called with GenomeAnalysisTK(Van der Auwera et al. 2002)
Proper citation: RRID:WB-STRAIN:WBStrain00047053 Copy
http://www.wormbase.org/db/get?name=WBStrain00047054
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: EMPTY
Notes: Duplicate of WBStrain00042097 with zero padding.
Proper citation: RRID:WB-STRAIN:WBStrain00047054 Copy
http://www.wormbase.org/db/get?name=WBStrain00042013
Source Database: WormBase (WB)
Affected Genes: WBGene00000898(daf-2)|WBGene00050887(Cbr-daf-2)
Genomic Alteration: WBGene00000898(daf-2), WBGene00050887(Cbr-daf-2)
Availability: available
Source References: EMPTY
Synonyms: Cbr-daf-2(sy5445).
Alternate IDs: WB-STRAIN:PS5531, CGC_PS5531
Notes: Non-elegans Strain|"This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."
Proper citation: RRID:WB-STRAIN:WBStrain00042013 Copy
http://www.wormbase.org/db/get?name=WBStrain00042096
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: C. briggsae wild isolate
Alternate IDs: WB-STRAIN:VX33
Notes: Non-elegans Strain
Proper citation: RRID:WB-STRAIN:WBStrain00042096 Copy
http://www.wormbase.org/db/get?name=WBStrain00042015
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: syIs802 X.
Alternate IDs: WB-STRAIN:PS9391, CGC_PS9391
Notes: Non-elegans Strain|"syIs802[Cel-daf-4(+) + Cel-myo-2::GFP]. May contain Cbr-daf-4(sa973) in background. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."
Proper citation: RRID:WB-STRAIN:WBStrain00042015 Copy
http://www.wormbase.org/db/get?name=WBStrain00042017
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: syIs804 X.
Alternate IDs: WB-STRAIN:PS9393, CGC_PS9393
Notes: Non-elegans Strain|"syIs804 [Cel-daf-4(+) + Cel-myo-2::GFP]. May contain Cbr-daf-4(sa973) in background. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."
Proper citation: RRID:WB-STRAIN:WBStrain00042017 Copy
http://www.wormbase.org/db/get?name=WBStrain00042023
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: Caenorhabditis briggsae wild isolate.
Alternate IDs: WB-STRAIN:QG107
Notes: Non-elegans Strain|"singled from rotten tomato #1 (East), collected July 18 2009 from the southern side of 6th St., Jersey City, ~15 feet east of the Jersey Avenue end of the embankment"
Proper citation: RRID:WB-STRAIN:WBStrain00042023 Copy
http://www.wormbase.org/db/get?name=WBStrain00042025
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: Caenorhabditis briggsae wild isolate.
Alternate IDs: WB-STRAIN:QG109
Notes: Non-elegans Strain|"singled from rotten tomato #1 (East), collected July 18 2009 from the southern side of 6th St., Jersey City, ~15 feet east of the Jersey Avenue end of the embankment"
Proper citation: RRID:WB-STRAIN:WBStrain00042025 Copy
http://www.wormbase.org/db/get?name=WBStrain00042028
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: Caenorhabditis briggsae wild isolate.
Alternate IDs: WB-STRAIN:QG112
Notes: Non-elegans Strain|"singled from rotten tomato #1 (East), collected July 18 2009 from the southern side of 6th St., Jersey City, ~15 feet east of the Jersey Avenue end of the embankment"
Proper citation: RRID:WB-STRAIN:WBStrain00042028 Copy
http://www.wormbase.org/db/get?name=WBStrain00042074
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: Cbr-unc-119(st20000) III; stIs20144 V.
Alternate IDs: WB-STRAIN:RW20144, CGC_RW20144
Notes: Non-elegans Strain|"stIs20144 [Cbr-myo-2p::GFP + Cbr-unc-119(+)] V. Transgene inserted into RW20000 Cbr-unc-119. Insertion site is between 4.66 and 7.75 Mb on Chromosome V. Reference: Bi Y, et al. PLoS Genet. 2015 Feb 18;11(2):e1004993."
Proper citation: RRID:WB-STRAIN:WBStrain00042074 Copy
http://www.wormbase.org/db/get?name=WBStrain00042073
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: Cbr-unc-119(st20000) III; stIs20134 V.
Alternate IDs: WB-STRAIN:RW20134, CGC_RW20134
Notes: Non-elegans Strain|"stIs20134 [Cbr-myo-2p::GFP + Cbr-unc-119(+)] V. Transgene inserted into RW20000 Cbr-unc-119. Insertion site is between 8.98 and 12.03 Mb on Chromosome V. Reference: Bi Y, et al. PLoS Genet. 2015 Feb 18;11(2):e1004993."
Proper citation: RRID:WB-STRAIN:WBStrain00042073 Copy
http://www.wormbase.org/db/get?name=WBStrain00042091
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: C. briggsae wild isolate.
Alternate IDs: WB-STRAIN:UH1, CGC_UH1
Notes: Isolated from the soil in a kabocha pumpkin patch garden (Baermann funnel method) in Kurtistown (native Hawaiian place name: Ola'a), Hawaii Island, on June 24, 2008.|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00042091 Copy
http://www.wormbase.org/db/get?name=WBStrain00042056
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: C. briggsae wild isolate
Alternate IDs: WB-STRAIN:QX1547
Notes: Non-elegans Strain
Proper citation: RRID:WB-STRAIN:WBStrain00042056 Copy
http://www.wormbase.org/db/get?name=WBStrain00042051
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: C. briggsae wild isolate.
Alternate IDs: WB-STRAIN:QR25, CGC_QR25
Notes: C. briggsae wild isolate from Montreal, Canada (C. Rocheleau).|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00042051 Copy
http://www.wormbase.org/db/get?name=WBStrain00042053
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:37626289, PMID:39303031, PMID:39554805
Synonyms: C. briggsae wild isolate
Alternate IDs: WB-STRAIN:QX1410
Notes: Non-elegans Strain
Proper citation: RRID:WB-STRAIN:WBStrain00042053 Copy
http://www.wormbase.org/db/get?name=WBStrain00042071
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: Cbr-unc-119(st20000) III; stIs20127 X.
Alternate IDs: WB-STRAIN:RW20127, CGC_RW20127
Notes: Non-elegans Strain|"stIs20127 [Cbr-myo-2p::GFP + Cbr-unc-119(+)] X. Transgene inserted into RW20000 Cbr-unc-119. Insertion site is between 4.51 and 5.51 Mb on Chromosome X. Reference: Bi Y, et al. PLoS Genet. 2015 Feb 18;11(2):e1004993."
Proper citation: RRID:WB-STRAIN:WBStrain00042071 Copy
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