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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00047943
Source Database: WormBase (WB)
Affected Genes: WBGene00007505(pezo-1)
Genomic Alteration: WBGene00007505(pezo-1)
Availability: available
Source References: PMID:32490809
Synonyms: pezo-1(av149) IV.
Alternate IDs: CGC_AG416
Notes: av149 is a CRISPR/Cas9 engineered deletion in the C-terminal region of pezo-1 removing the last seven exons (2733) and introns. Small brood size. Reference: Bai X, et al. Elife. 2020 Jun 3:9:e53603. doi: 10.7554/eLife.53603. PMID: 32490809.|"Batch Strain object requested via get_NS_ids.pl"|"Generated from papers flagged positive during the last month for data type afp_strain/other_strain."
Proper citation: RRID:WB-STRAIN:WBStrain00047943 Copy
http://www.wormbase.org/db/get?name=WBStrain00048564
Source Database: WormBase (WB)
Affected Genes: WBGene00003161(mdf-2)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00003161(mdf-2), WBGene00006843(unc-119)
Availability: available
Source References: PMID:31588029
Synonyms: unc-119(ed3) III; mdf-2(lt4::loxP::Cbr-unc-119(+)::loxP) IV/nT1 [qIs51] (IV;V).
Alternate IDs: CGC_OD2174
Notes: CRISPR/Cas9 engineered deletion of mdf-2 in which the mdf-2 coding sequence was replaced by unc-119. Heterozygotes are wild-type GFP+ and segregate mdf-2 null homozygotes (low brood size/embryonic lethal), wild-type GFP+ heterozygotes, and arrested nT1[qIs51] aneuploids. Pick wild-type GFP+ and check for correct segregation of progeny to maintain. Unknown if unc-119(ed3) from parental strain is still carried in the background. gRNA sequence: Gccaaattccccagttttag Reference: Lara-Gonzalez P, et al. Dev Cell. 2019 Nov 4;51(3):313-325.e10. doi: 10.1016/j.devcel.2019.09.005. PMID: 31588029.|"Generated from papers flagged positive during the last month for data type afp_strain/other_strain."
Proper citation: RRID:WB-STRAIN:WBStrain00048564 Copy
http://www.wormbase.org/db/get?name=WBStrain00048566
Source Database: WormBase (WB)
Affected Genes: WBGene00000868(cyb-3)
Genomic Alteration: WBGene00000868(cyb-3)
Availability: available
Source References: PMID:31588029
Synonyms: cyb-3(lt110) V/nT1 [qIs51] (IV;V).
Alternate IDs: CGC_OD3737
Notes: CRISPR/Cas9 engineered deletion of cyb-3. Heterozygotes are wild-type GFP+ and segregate mdf-2 null homozygotes (embryonic lethal), wild-type GFP+ heterozygotes, and arrested nT1[qIs51] aneuploids. Pick wild-type GFP+ and check for correct segregation of progeny to maintain. gRNA sequences: tcaggtcgacattcttggcc & gttatgggtatgagagcatt Reference: Lara-Gonzalez P, et al. Dev Cell. 2019 Nov 4;51(3):313-325.e10. doi: 10.1016/j.devcel.2019.09.005. PMID: 31588029.|"Generated from papers flagged positive during the last month for data type afp_strain/other_strain."
Proper citation: RRID:WB-STRAIN:WBStrain00048566 Copy
http://www.wormbase.org/db/get?name=WBStrain00048568
Source Database: WormBase (WB)
Affected Genes: WBGene00000488(che-7)
Genomic Alteration: WBGene00000488(che-7)
Availability: available
Source References: PMID:32356725
Synonyms: che-7(ot866[che-7::TagRFP]) V.
Alternate IDs: CGC_OH16372
Notes: Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"tagRFP inserted into endogenous che-7 locus."
Proper citation: RRID:WB-STRAIN:WBStrain00048568 Copy
http://www.wormbase.org/db/get?name=WBStrain00048836
Source Database: WormBase (WB)
Availability: available
Synonyms: EMPTY
Alternate IDs: CGC_RW12085
Notes: Modern strain accessioned as a batch with get_NS_ids.pl
Proper citation: RRID:WB-STRAIN:WBStrain00048836 Copy
http://www.wormbase.org/db/get?name=WBStrain00046991
Source Database: WormBase (WB)
Availability: available
Synonyms: Serratia marcescens
Alternate IDs: WB-STRAIN:IGX2, CGC_IGX2
Notes: Db11. Tetracyclin, streptomycin and kanamycin resistant. A spontaneous mutant resistant to streptomycin isolated from Db10. See Flyg, Kenne K, Boman HG: Insect pathogenic properties of Serratia marcescens: phage-resistant mutants with a decreased resistance to Cecropia immunity and a decreased virulence to Drosophila. J. Gen. Microbiol. 1980; 120: 173-181.|"No longer available from the CGC catalogue 24/04/2020"|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00046991 Copy
http://www.wormbase.org/db/get?name=WBStrain00046990
Source Database: WormBase (WB)
Availability: available
Synonyms: Serratia marcescens.
Alternate IDs: WB-STRAIN:IGX1, CGC_IGX1
Notes: Db10. Tetracyclin resistant. A non-pigmented strain of Serratia marcescens isolated from moribund Drosophila flies. See Flyg, Kenne K, Boman HG: Insect pathogenic properties of Serratia marcescens: phage-resistant mutants with a decreased resistance to Cecropia immunity and a decreased virulence to Drosophila. J. Gen. Microbiol. 1980; 120: 173-181.|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00046990 Copy
http://www.wormbase.org/db/get?name=WBStrain00044397
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Synonyms: ltSi1 II; unc-119(ed3) III.
Alternate IDs: CGC_OD334
Notes: Generated based on CalTech XREF data|"ltSi1 [knl-1p::knl-1(re-encoded)::RFP + Cbr-unc-119(+)] II. KNL-1::RFP has been re-coded to be knl-1(RNAi) resistant. Reference: Espeut J, et al. Cell Rep. 2015 Jul 7;12(1):58-65. doi: 10.1016/j.celrep.2015.05.039. PMID: 26119738"|"Made_by: Arshad Desai lab"
Proper citation: RRID:WB-STRAIN:WBStrain00044397 Copy
http://www.wormbase.org/db/get?name=WBStrain00044793
Source Database: WormBase (WB)
Availability: available
Synonyms: syIs503.
Alternate IDs: CGC_PS8023
Notes: Generated based on CalTech XREF data|"Made_by: Mengyi Cao"|"syIs503 [15xUAS::Chrimson::GFP::let-858 3'UTR + unc-122p::GFP + 1kb DNA ladder (NEB)]. Red light-activated channelrhodopsin cGAL effector. Reference: Cao M, et al. Application of the red-shifted channel rhodopsin Chrimson for the Caenorhabditis elegans cGAL bipartite system. MicroPubl Biol. 2018 Aug 22;2018:10.17912/2JGW-FJ52. doi: 10.17912/2JGW-FJ52. PMID: 32550400."
Proper citation: RRID:WB-STRAIN:WBStrain00044793 Copy
http://www.wormbase.org/db/get?name=WBStrain00045475
Source Database: WormBase (WB)
Availability: available
Synonyms: ustSi25 II.
Alternate IDs: CGC_SHG487
Notes: Generated based on CalTech XREF data|"ustSi25 [wago-4p::3xFlag::GFP::wago-4::wago-4 3'UTR + Cbr-unc-119(+)] II. Inserted into ttTi5605 of parental strain EG4322. Reference: Xu F, et al. Cell rep. 2018 May 22;23(8):2482-2494. doi: 10.1016/j.celrep.2018.04.072. PMID: 29791857."
Proper citation: RRID:WB-STRAIN:WBStrain00045475 Copy
http://www.wormbase.org/db/get?name=WBStrain00042363
Source Database: WormBase (WB)
Availability: available
Synonyms: EMPTY
Alternate IDs: CGC_BK205
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00042363 Copy
http://www.wormbase.org/db/get?name=WBStrain00042365
Source Database: WormBase (WB)
Availability: available
Synonyms: EMPTY
Alternate IDs: CGC_BK210
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00042365 Copy
http://www.wormbase.org/db/get?name=WBStrain00042362
Source Database: WormBase (WB)
Availability: available
Synonyms: EMPTY
Alternate IDs: CGC_BK204
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00042362 Copy
http://www.wormbase.org/db/get?name=WBStrain00042367
Source Database: WormBase (WB)
Availability: available
Synonyms: EMPTY
Alternate IDs: CGC_BK220
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00042367 Copy
http://www.wormbase.org/db/get?name=WBStrain00042531
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004857(sma-3)
Genomic Alteration: WBGene00001864(him-5), WBGene00004857(sma-3)
Availability: available
Synonyms: sma-3(wk30) III; him-5(e1490) V; qcEx55.
Alternate IDs: WB-STRAIN:CS215, CGC_CS215
Notes: Generated based on CalTech XREF data|"No longer available from the CGC catalogue 24/04/2020"|"qcEx55 [vha-7p::GFP::sma-3 + rol-6(su1006)]. Rollers. Pick rollers to maintain. Array rescues body size phenotype. Reference: Wang J, Tokarz R, Savage-Dunn C. Development. 2002 Nov;129(21):4989-98."
Proper citation: RRID:WB-STRAIN:WBStrain00042531 Copy
http://www.wormbase.org/db/get?name=WBStrain00043502
Source Database: WormBase (WB)
Availability: available
Source References: PMID:37980357
Synonyms: ufIs126 V.
Alternate IDs: CGC_IZ1458
Notes: Generated based on CalTech XREF data|"Supplementary_genotype ufIs126"|"ufIs126 [flp-13p::acr-12::GFP + lgc-11::mCherry] V. ACR-12::GFP expression labels postsynaptic iAChRs in DD motor neurons. References: Philbrook A, et al. eLife. 2018 Jul 24;7:e35692. doi: 10.7554/eLife.35692. PMID: 30039797. Oliver D, et al. PLoS Genet. 2022 Jan 28;18(1):e1010016. doi: 10.1371/journal.pgen.1010016. PMID: 35089924. Alexander K, et al. bioRxiv 2022.10.21.512874; doi: https:"
Proper citation: RRID:WB-STRAIN:WBStrain00043502 Copy
http://www.wormbase.org/db/get?name=WBStrain00043478
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Synonyms: unc-119(ed3) III; kpIs100.
Alternate IDs: CGC_IT1187
Notes: Generated based on CalTech XREF data|"kpIs100 [pie-1p::Ub(G76V)::GFP::H2B::drp-1 3' UTR + unc-119(+)]. [NOTE: (4/4/2025): Strain segregates Dpy, Rol, and non-Rol, possibly due to a background dpy-10 mutation; bothexpress GFP as expected. It was recommended that non-Rollers be picked when maintaining the strain.] Expresses Ubiquitin::GFP fusion protein in the germ line. The last amino acid of ubiquitin is mutated to valine (G76V), which prevents the cleavage of ubiquitin from GFP by the deubiqutinating enzymes and renders the GFP constitutively targeted for degradation by the proteasome. The strain can be used to assay proteasome activity in the germ line. Reference: Kumar GA & Subramaniam K. Development. 2018 Mar 29;145(7):dev163949. PMID: 29540500"
Proper citation: RRID:WB-STRAIN:WBStrain00043478 Copy
http://www.wormbase.org/db/get?name=WBStrain00006319
Source Database: WormBase (WB)
Affected Genes: WBGene00000123(ama-1)|WBGene00001074(dpy-13)|WBGene00002505(let-276)
Genomic Alteration: WBGene00000123(ama-1), WBGene00001074(dpy-13), WBGene00002505(let-276)
Availability: available
Source References: PMID:8608933
Synonyms: dpy-13(e184) ama-1(m118) let-276(m240)/nT1 IV; +/nT1 V.
Alternate IDs: WB-STRAIN:DR787, CGC_DR787
Notes: Heterozygotes are semi-Dpy and segregate semi-Dpy, Vul, DpyLet and dead eggs. Lethal early larval. Maintain by picking semi-Dpy.|"Made_by: Bullerjahn A"
Proper citation: RRID:WB-STRAIN:WBStrain00006319 Copy
http://www.wormbase.org/db/get?name=WBStrain00006318
Source Database: WormBase (WB)
Affected Genes: WBGene00000123(ama-1)
Genomic Alteration: WBGene00000123(ama-1)
Availability: available
Source References: PMID:8608933
Synonyms: ama-1(m322) IV.
Alternate IDs: WB-STRAIN:DR786, CGC_DR786
Notes: Made_by: Bullerjahn A|"WT strain. Resistant to _-amanitin."
Proper citation: RRID:WB-STRAIN:WBStrain00006318 Copy
http://www.wormbase.org/db/get?name=WBStrain00006314
Source Database: WormBase (WB)
Affected Genes: WBGene00000123(ama-1)|WBGene00001074(dpy-13)
Genomic Alteration: WBGene00000123(ama-1), WBGene00001074(dpy-13)
Availability: available
Synonyms: dpy-13(e184) ama-1(m118m251) IV.
Alternate IDs: WB-STRAIN:DR731, CGC_DR731
Notes: Dpy. Sensitive to alpha-amanitin. Temperature sensitive, maintain at 15C. Fertile at 20C. Emb at restrictive temperature (25C). Reference: Bowman EA, Riddle DR, Kelly WG. G3 November 2011 1:411-416.
Proper citation: RRID:WB-STRAIN:WBStrain00006314 Copy
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