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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00055160
Source Database: WormBase (WB)
Affected Genes: WBGene00003740(nlp-2)
Genomic Alteration: WBGene00003740(nlp-2)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-2(syb5697 [nlp-2::SL2::GFP::H2B]) X.
Notes: GFP tag inserted at the C-terminus of the endogenous nlp-2 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"GFP tag inserted at the C-terminus of the endogenous nlp-2 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. PLoS Genet. 2022 Sep 30;18(9):e1010372. doi: 10.1371/journal.pgen.1010372. PMID: 36178933."|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055160 Copy
http://www.wormbase.org/db/get?name=WBStrain00055162
Source Database: WormBase (WB)
Affected Genes: WBGene00004077(pop-1)
Genomic Alteration: WBGene00004077(pop-1)
Availability: unknown
Source References: EMPTY
Synonyms: pop-1(syb5791[GFP::AID::GGGGSGSGS linker::pop-1]) I.
Notes: GFP and AID tags inserted at the N-terminus of the endogenous pop-1 locus by CRISPR. Insertion includes a GGGGSGSGS linker sequence between the tags and POP-1. Generated in N2 background.|"Made_by: Xiulan Hu"
Proper citation: RRID:WB-STRAIN:WBStrain00055162 Copy
http://www.wormbase.org/db/get?name=WBStrain00055161
Source Database: WormBase (WB)
Affected Genes: WBGene00004013(pha-4)
Genomic Alteration: WBGene00004013(pha-4)
Availability: unknown
Source References: EMPTY
Synonyms: pha-4(ot946 ot1078 syb5755[pha-4::3xGAS::GFP::3xGAS::AID::TEV::LoxP::3xFLAG]) V.
Notes: Endogenously-tagged pha-4 locus allele modified for auxin dependent protein degradation. ot946 [pha-4::3xGAS::GFP::TEV::LoxP::3xFLAG]. ot1078 added a second loxP site to the first intron (+278). syb5755 added 3xGAS::AID after the GFP tag. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: SUNY Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055161 Copy
http://www.wormbase.org/db/get?name=WBStrain00055145
Source Database: WormBase (WB)
Affected Genes: WBGene00000451(ceh-30)
Genomic Alteration: WBGene00000451(ceh-30)
Availability: unknown
Source References: EMPTY
Synonyms: ceh-30(syb4678[ceh-30::GFP]) X.
Notes: GFP tag inserted at the C-terminus of the endogenous ceh-30 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Reilly MB, et al. bioRxiv 2022.04.29.490095; doi: https:|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055145 Copy
http://www.wormbase.org/db/get?name=WBStrain00055148
Source Database: WormBase (WB)
Affected Genes: WBGene00004370(rig-3)
Genomic Alteration: WBGene00004370(rig-3)
Availability: unknown
Source References: EMPTY
Synonyms: rig-3(syb4763[rig-3::SL2::GFP::H2B]) X.
Notes: CRISPR/Cas9-engineered reporter allele. Reference: The enteric nervous system of C. elegans is specified by the Sine Oculis-like homeobox gene ceh-34. Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:|"CRISPR/Cas9-engineered reporter allele. Reference: Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055148 Copy
http://www.wormbase.org/db/get?name=WBStrain00055147
Source Database: WormBase (WB)
Affected Genes: WBGene00016354(rig-6)
Genomic Alteration: WBGene00016354(rig-6)
Availability: unknown
Source References: EMPTY
Synonyms: rig-6(syb4729[rig-6::SL2::GFP::H2B]) II.
Notes: CRISPR/Cas9-engineered reporter allele. Reference: The enteric nervous system of C. elegans is specified by the Sine Oculis-like homeobox gene ceh-34. Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:|"CRISPR/Cas9-engineered reporter allele. Reference: Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055147 Copy
http://www.wormbase.org/db/get?name=WBStrain00055142
Source Database: WormBase (WB)
Affected Genes: WBGene00006775(unc-39)
Genomic Alteration: WBGene00006775(unc-39)
Availability: unknown
Source References: EMPTY
Synonyms: unc-39(syb4537[unc-39::gfp]) V.
Notes: CRISPR/Cas9 engineered tagged endogenous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055142 Copy
http://www.wormbase.org/db/get?name=WBStrain00055149
Source Database: WormBase (WB)
Affected Genes: WBGene00001466(gpla-1)
Genomic Alteration: WBGene00001466(gpla-1)
Availability: unknown
Source References: EMPTY
Synonyms: gpla-1(syb4861[flr-2::SL2::GFP::H2B]) V.
Notes: CRISPR/Cas9-engineered reporter allele. gpla-1 formerly known as flr-2. Reference: Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:|"CRISPR/Cas9-engineered reporter allele. Reference: The enteric nervous system of C. elegans is specified by the Sine Oculis-like homeobox gene ceh-34. Vidal B, et al. bioRxiv 2021.11.30.470650; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055149 Copy
http://www.wormbase.org/db/get?name=WBStrain00055137
Source Database: WormBase (WB)
Affected Genes: WBGene00013752(nlp-69)
Genomic Alteration: WBGene00013752(nlp-69)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-69(syb4512[nlp-69::SL2::gfp::H2B]) V.
Notes: CRISPR/Cas9 engineered tagged endogenous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:"|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055137 Copy
http://www.wormbase.org/db/get?name=WBStrain00055139
Source Database: WormBase (WB)
Affected Genes: WBGene00021275(dmsr-2)
Genomic Alteration: WBGene00021275(dmsr-2)
Availability: unknown
Source References: PMID:37935195
Synonyms: dmsr-2(syb4514 [dmsr-2::SL2::gfp::H2B]) I.
Notes: CRISPR/Cas9 engineered tagged endogenous locus. Reference: Cros C & Hobert O. Proc Natl Acad Sci USA. 2022 Sep 13;119(37):e2206817119. doi: 10.1073/pnas.2206817119. PMID: 36067313.|"CRISPR/Cas9 engineered tagged endogneous locus. Reference: Cros C & Hobert O. bioRxiv 2022.04.19.488792; doi: https:"|"Made_by: Suny Biotech"|"Supplementary_genotype dmsr-2(syb4514 [dmsr-2::SL2::gfp::H2B]) I"
Proper citation: RRID:WB-STRAIN:WBStrain00055139 Copy
http://www.wormbase.org/db/get?name=WBStrain00055140
Source Database: WormBase (WB)
Affected Genes: WBGene00019616(nmur-2)
Genomic Alteration: WBGene00019616(nmur-2)
Availability: unknown
Source References: PMID:37935195
Synonyms: nmur-2(syb4517 [nmur-2::SL2::GFP::H2B)] II.
Notes: GFP tag inserted at the C-terminus of the endogenous nmur-2 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"GFP tag inserted at the C-terminus of the endogenous nmur-2 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Ripoll-Sanchez L, et al. Neuron. 2023 Nov 15;111(22):3570-3589.e5. doi: 10.1016/j.neuron.2023.09.043. PMID: 37935195."|"Made_by: Suny Biotech"|"Supplementary_genotype nmur-2(syb4517 [nmur-2::SL2::GFP::H2B)] II"
Proper citation: RRID:WB-STRAIN:WBStrain00055140 Copy
http://www.wormbase.org/db/get?name=WBStrain00055234
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs572.
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs572 [15xUAS::TeTx::SL2::mKate::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] Neurotoxin cGAL effector."
Proper citation: RRID:WB-STRAIN:WBStrain00055234 Copy
http://www.wormbase.org/db/get?name=WBStrain00055230
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407, PMID:39024405
Synonyms: syIs595.
Notes: syIs595 [mec-17p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. cGAL driver for ALM, AVM, PLM, and PVM neurons.
Proper citation: RRID:WB-STRAIN:WBStrain00055230 Copy
http://www.wormbase.org/db/get?name=WBStrain00055196
Source Database: WormBase (WB)
Affected Genes: WBGene00017954(F31E8.4)
Genomic Alteration: WBGene00017954(F31E8.4)
Availability: unknown
Source References: EMPTY
Synonyms: F31E8.4(sy2030) II.
Notes: Made_by: Heenam Park|"Superficially wild type. CRISPR/Cas9 engineered STOP-IN null mutant of F31E8.4. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). Left flanking sequence: GATTCTCTTCAGCTGGTGGAAAACTGGATCTCT. Right flanking sequence: GTCTGgtaagtctatatacttcggacacattcaaatttg. Inserted sequence between the two-flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: TGGAAAACTGGATCTCTGTC. Method Reference: Wang H, et al. G3 (Bethesda). 2018 Nov 6;8(11):3607-3616."
Proper citation: RRID:WB-STRAIN:WBStrain00055196 Copy
http://www.wormbase.org/db/get?name=WBStrain00055232
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs568.
Notes: Made_by: Chun-Hao Chen/Jun Young Oh|"syIs568 [15xUAS::tra-2(ic)::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] cGAL effector to induce feminization"
Proper citation: RRID:WB-STRAIN:WBStrain00055232 Copy
http://www.wormbase.org/db/get?name=WBStrain00055223
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs536.
Notes: syIs536 [15xUAS::lin-3c::SL2::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] cGAL effector for epidermal growth factor
Proper citation: RRID:WB-STRAIN:WBStrain00055223 Copy
http://www.wormbase.org/db/get?name=WBStrain00055189
Source Database: WormBase (WB)
Affected Genes: WBGene00008626(nlp-79)
Genomic Alteration: WBGene00008626(nlp-79)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-79(syb7564[nlp-79::SL2::GFP::H2B]) IV.
Notes: Endogenous locus tagged with SL2::GFP::H2B using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055189 Copy
http://www.wormbase.org/db/get?name=WBStrain00055225
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs554; syIs300
Notes: Made_by: JUN Young Oh/Shahla Gharib|"syIs554 [nmr-1p::NLS::cGAL(DBD)::gp41-1-N-intein::let-858 3'UTR + flp-20p::NLS::gp41-1-C-intein::cGAL(AD)::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. Split cGAL driver for PVC neuron. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055225 Copy
http://www.wormbase.org/db/get?name=WBStrain00055224
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs537; syIs300
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs537 [glr-3p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] cGAL driver for RIA neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055224 Copy
http://www.wormbase.org/db/get?name=WBStrain00055221
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs532; syIs300
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs532 [hlh-34p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] cGAL driver for AVH neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055221 Copy
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