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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00027505
Source Database: WormBase (WB)
Affected Genes: WBGene00003306(mir-78)
Genomic Alteration: WBGene00003306(mir-78)
Availability: available
Synonyms: mir-78(n4637) IV.
Alternate IDs: WB-STRAIN:MT15021, CGC_MT15021
Notes: Deletion breakpoints are:CTTTCATACATCTATTTT / ATACGGAAATGTAAAAT...CTTGTTTCAAGCTATCC / ATTTTGCAACAATACTGT. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects.|"Deletion breakpoints are:CTTTCATACATCTATTTT / ATACGGAAATGTAAAAT...CTTGTTTCAAGCTATCC / ATTTTGCAACAATACTGT.Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."|"Made_by: Horvitz Lab"|"Mutagen:UV/TMP"
Proper citation: RRID:WB-STRAIN:WBStrain00027505 Copy
http://www.wormbase.org/db/get?name=WBStrain00027588
Source Database: WormBase (WB)
Affected Genes: WBGene00003334(mir-240)|WBGene00045343(mir-786)
Genomic Alteration: WBGene00003334(mir-240), WBGene00045343(mir-786)
Availability: available
Synonyms: mir-240&mir-786(n4541) X.
Alternate IDs: WB-STRAIN:MT18043, CGC_MT18043
Notes: Deletion breakpoints are: TTGTTGGAGAAATGAATAAA / TGGAACAAAATTAAGAATA...AATGTTTATTATGTTGCAAG / TCTACAAAATTAGGGAACA. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects.|"Made_by: Horvitz Lab Members"
Proper citation: RRID:WB-STRAIN:WBStrain00027588 Copy
http://www.wormbase.org/db/get?name=WBStrain00027645
Source Database: WormBase (WB)
Affected Genes: WBGene00016935(ifta-1)
Genomic Alteration: WBGene00016935(ifta-1)
Availability: available
Source References: PMID:38302462
Synonyms: ifta-1(nx61) X.
Alternate IDs: WB-STRAIN:MX124, CGC_MX124
Notes: Homozygous viable with no obvious morphological, locomotory, or behavioral phenotypes. However, these animals display cilia-related chemosensory (Che) defective and dye-fill (Dyf) defective phenotypes. 2009 bp deletion with flanking sequences of GATAAGAGGAAATCTTTTTGGAGAGTTGGA and ATTTAGTTTTTCACAAAGAACACCGCAATA.
Proper citation: RRID:WB-STRAIN:WBStrain00027645 Copy
http://www.wormbase.org/db/get?name=WBStrain00027647
Source Database: WormBase (WB)
Availability: available
Source References: PMID:22301316, PMID:31422888, PMID:33820969, PMID:34622777, PMID:38564369, PMID:38865452
Synonyms: wild
Alternate IDs: WB-STRAIN:MY1, CGC_MY1
Notes: Natural isolate; obtained in April 2002 from compost heap in Lingen, Emsland, North-West Germany; frozen within 5 generations after isolation; microsatellite genotype EU1.
Proper citation: RRID:WB-STRAIN:WBStrain00027647 Copy
http://www.wormbase.org/db/get?name=WBStrain00027664
Source Database: WormBase (WB)
Availability: available
Source References: PMID:22301316, PMID:33820969, PMID:38564369, PMID:38865452, PMID:39303031
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:MY18, CGC_MY18
Notes: Natural isolate. Obtained in October 2002 from a compost heap in Roxel, Munster, Northwest Germany. Frozen within 5 generations after isolation. Microsatellite genotype EU4.
Proper citation: RRID:WB-STRAIN:WBStrain00027664 Copy
http://www.wormbase.org/db/get?name=WBStrain00027977
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369, PMID:38865452
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:MY795
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.|"species identified with species specific primers"
Proper citation: RRID:WB-STRAIN:WBStrain00027977 Copy
http://www.wormbase.org/db/get?name=WBStrain00061150
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:39975509
Synonyms: EMPTY
Notes: [2025-02-04T20:40:47.314Z WBPerson712] New Strain: CB7589 nhr-40(gk403344) CGC/VC20789 WBPaper00067789
Proper citation: RRID:WB-STRAIN:WBStrain00061150 Copy
http://www.wormbase.org/db/get?name=WBStrain00061141
Source Database: WormBase (WB)
Availability: unknown
Synonyms: EMPTY
Notes: [2025-02-03T21:52:52.509Z WBPerson712] New Strain: CB7397 nhr-49(et8) CGC/QC121 WB00067789
Proper citation: RRID:WB-STRAIN:WBStrain00061141 Copy
http://www.wormbase.org/db/get?name=WBStrain00061615
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:39259762
Synonyms: (atn-1(ftw35[atn-1::mCH::ICR::GFLnls]) V)
Notes: [2025-02-19T21:53:45.638Z WBPerson51134] New Strain: WBPaper00067237, RSL62 (atn-1(ftw35[atn-1::mCH::ICR::GFLnls]) V), C. elegans
Proper citation: RRID:WB-STRAIN:WBStrain00061615 Copy
http://www.wormbase.org/db/get?name=WBStrain00061664
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38991033
Synonyms: png-1(ok1654) I; rsks-1(ok1255) III
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00061664 Copy
http://www.wormbase.org/db/get?name=WBStrain00061833
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:39418305
Synonyms: manf-1(gk3677);hjIs14 [vha-6p::GFP::C34B2.10(SP12) + unc-119(+)]
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00061833 Copy
http://www.wormbase.org/db/get?name=WBStrain00062586
Source Database: WormBase (WB)
Affected Genes: WBGene00002246(lag-2)|WBGene00003001(lin-12)
Genomic Alteration: WBGene00002246(lag-2), WBGene00003001(lin-12)
Availability: unknown
Synonyms: cshIs140 II; lin-12(ljf33[lin-12::mNeonGreen[C1]::loxP::3xFLAG::AID*]) III; lag-2(bmd202[lag-2::P2A::H2B::mTurquoise2::lox511i::2xHA]) V.
Notes: cshIs140 [rpl-28p::TIR1(F79G)::T2A::mCherry::HIS-11] II. Allows for conditional degradation of endogenous LIN-12 using 5-Ph-IAA. Reference: Pani AM, et al. A new toolkit to visualize and perturb endogenous LIN-12/Notch signaling in C. elegans. MicroPubl Biol. 2022 Jul 28;2022:10.17912/micropub.biology.000603. doi: 10.17912/micropub.biology.000603. PMID: 35966394.|"Made_by: Theresa Gibney and Taylor Medwig-Kinney"
Proper citation: RRID:WB-STRAIN:WBStrain00062586 Copy
http://www.wormbase.org/db/get?name=WBStrain00062723
Source Database: WormBase (WB)
Availability: unknown
Synonyms: E. coli [MG1655 bioB::kan].
Notes: Biotin auxotrophic E. coli strain is kan resistant and grows fine on LB. This mutant strain produces significantly less biotin and can therefore be used to reduce background in TurboID experiments. Also known as MG1655 bioB::kan and STL110 (J. Cronen, U. of Illinois). References: Sanchez AD & Feldman JL. STAR Protoc. 2021 Dec 2;2(4):100986. doi: 10.1016/j.xpro.2021.100986. PMID: 34927095. Ortega-Cuellar D., et al. J Nutrigenet Nutrigenomics. 2010;3(1):18-30. doi: 10.1159/000318054. PMID: 20798549|"Made_by: Ortega-Cuellar et al., 2010"
Proper citation: RRID:WB-STRAIN:WBStrain00062723 Copy
http://www.wormbase.org/db/get?name=WBStrain00059524
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38266092
Synonyms: dmaIs125 [tsp-1p::tsp-1::GFP; unc-54p::mCherry]
Notes: [2024-06-07T13:18:34.611Z WBPerson51134] New Strain: WBPaper00066419, dmaIs125 [tsp-1p::tsp-1::GFP; unc-54p::mCherry], DMS1857, C.elegans.
Proper citation: RRID:WB-STRAIN:WBStrain00059524 Copy
http://www.wormbase.org/db/get?name=WBStrain00059576
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38051962
Synonyms: tmem-120(av252) tmem-120
Notes: [2024-06-10T14:53:39.987Z WBPerson51134] New Strain: WBPaper00066140, AG638 tmem-120(av252) tmem-120
Proper citation: RRID:WB-STRAIN:WBStrain00059576 Copy
http://www.wormbase.org/db/get?name=WBStrain00060127
Source Database: WormBase (WB)
Affected Genes: WBGene00001402(fbf-2)
Genomic Alteration: WBGene00001402(fbf-2)
Availability: unknown
Source References: PMID:38290520
Synonyms: fbf-2(q1080[*1011]) II.
Notes: Made_by: Peggy Kroll-Conner/Brian Carrick|"q1080 is an engineered insertion of LambdaN peptide near the C-terminus of 3xFLAG-tagged FBF-2 with a Y479A point mutation in the R7/R8 loop. Derived by modification of parental strain JK5984 fbf-2(q1011[*q945]) II. Reference: Carrick BH, et al. Dev Cell. 2024 Mar 11;59(5):661-675.e7. doi: 10.1016/j.devcel.2024.01.005. PMID: 38290520."
Proper citation: RRID:WB-STRAIN:WBStrain00060127 Copy
http://www.wormbase.org/db/get?name=WBStrain00060570
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38808663
Synonyms: mett-10(rna004[pMex-5::mett-10::OLLAS::tbb-2_UTR])
Notes: [2024-10-26T20:37:03.438Z WBPerson51134] New Strain: WBPaper00066830, mett-10(rna004[pMex-5::mett-10::OLLAS::tbb-2_UTR]), ALP012, C. elegans
Proper citation: RRID:WB-STRAIN:WBStrain00060570 Copy
http://www.wormbase.org/db/get?name=WBStrain00060894
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:39845268
Synonyms: EMPTY
Notes: [2024-12-25T21:42:36.851Z WBPerson712] New Strain: petIR 3 (V; bcIs39[lim-7p::ced-1GFP: lin-15(+)] N2>N2) WBPaper00067604
Proper citation: RRID:WB-STRAIN:WBStrain00060894 Copy
http://www.wormbase.org/db/get?name=WBStrain00063213
Source Database: WormBase (WB)
Availability: unknown
Synonyms: wyIs592 III.
Notes: wyIs592 [ser-2(prom3)::myr::GFP + odr-1p::RFP] III. Fluorescent PVD- and FLP-specific morphology markers. Reference: Eichel K, et al. Nature. 2022 Sep;609(7925):128-135. PMID: 35978188.
Proper citation: RRID:WB-STRAIN:WBStrain00063213 Copy
http://www.wormbase.org/db/get?name=WBStrain00063353
Source Database: WormBase (WB)
Affected Genes: WBGene00006414(raga-1)
Genomic Alteration: WBGene00006414(raga-1)
Availability: unknown
Synonyms: ieSi57 raga-1(wbm40[raga-1::AID::EmGFP]) II.
Notes: ieSi57 [eft-3p::TIR1::mRuby::unc-54 3'UTR + Cbr-unc-119(+)] II. Auxin-inducible degron (AID) and EmGFP tags inserted at the C-terminus of the endogenous raga-1 locus using CRISPR/Cas9. Somatic expression of TIR1 allows for auxin-inducible degradation of RAGA-1 in the soma. Reference: Smith HJ, et al. PLOS Genetics 19(9): e1010938. https:|"Made_by: Hannah J Smith"
Proper citation: RRID:WB-STRAIN:WBStrain00063353 Copy
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