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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Synaptic Vesicles Detection
 
Resource Report
Resource Website
10+ mentions 		Synaptic Vesicles Detection (RRID:SCR_024910) software application, image analysis software, data processing software, software resource, source code Software tool as Python based synaptic vesicle classifier algorithm to identify neurotransmitter vesicles in electron microscopy images using Pytorch. OpenBehavior, synaptic vesicle classifier algorithm, identify neurotransmitter vesicles, electron microscopy images uses: PyTorch
is listed by: OpenBehavior 		PMID:34983830 Free, Available for download, Freely available https://edspace.american.edu/openbehavior/project/synaptic-vesicles-detection-and-localization/ SCR_024910 2026-08-16 09:07:12 12
PyTorch
 
Resource Report
Resource Website
1000+ mentions 		PyTorch (RRID:SCR_018536) software toolkit, software resource Open source machine learning library based on Torch library, used for applications such as computer vision and natural language processing. Software Python package that provides tensor computation with strong GPU acceleration and deep neural networks built on tape-based autograd system. Computer vision, natural language processing, Python, tensor computation, neural network is used by: Synaptic Vesicles Detection
is related to: PySyft
works with: PyTorch Lightning 		Free, Available for download, Freely available https://github.com/pytorch/pytorch SCR_018536 2026-08-15 11:30:08 4516
OpenBehavior
 
Resource Report
Resource Website
1+ mentions 		OpenBehavior (RRID:SCR_015938) OB software repository, software resource Repository of open source tools for behavioral neuroscience research. OpenBehavior features hardware (tools, devices, apparatuses), as well as software for data acquisition and analysis and for the investigation of animal behavior and cognition. Dedicated to accelerating research through promotion of collaboration and open source projects. software, data, hardware, animal, behavior, cognition, cognitive, analysis, processing lists: Feeding Experimentation Device project
lists: Bpod
lists: SLEAP, LEAP and MotionMapper project
lists: Social LEAP
lists: MotionMapper
lists: Behavioral Segmentation of Open-field in DeepLabCut project
lists: DeepBehavior project
lists: BonZeb project
lists: D-Track project
lists: Online Animal Tracker project
lists: Locomouse project
lists: openEyeTrack project
lists: DeepPoseKit project
lists: DeepFly3D project
lists: neurotic project
lists: Rodent Arena Tracker project
lists: Open Source Whisking Video Database portal
lists: Simple Behavior Analysis project
lists: OpenMonkeyStudio project
lists: FaceSync project
lists: Online Animal Tracker
lists: DeepBehavior
lists: BonZeb
lists: Behavioral Segmentation of Open-field in DeepLabCut
lists: FaceSync
lists: LocoMouse
lists: DeepPoseKit
lists: openEyeTrack
lists: D-Track
lists: Simple Behavior Analysis
lists: DeepFly3D
lists: Open Source Whisking Video Database
lists: neurotic
lists: Low Cost Open Source Eye Tracking project
lists: Stytra project
lists: Calcium ActiVity Explorer project
lists: idtracker.ai project
lists: Live Mouse Tracker project
lists: ToxTrac project
lists: Picamera project
lists: EthoScopes project
lists: Worm Behavior Platform project
lists: KineMouse Wheel project
lists: Mousecam project
lists: M-Track project
lists: ezTrack project
lists: FaceMap project
lists: Head-Fixed Setup for Combined Behavior, Electrophysiology, and Optogenetics project
lists: ZebraTrack project
lists: LocoWhisk project
lists: EthoWatcher project
lists: Skinner Box project
lists: Behavioral Observation Research Interactive Software project
lists: Pyper project
lists: Automated Rodent Tracker project
lists: LinCoM project
lists: Bonsai project
lists: Quantifying Animal Movement from Pre-recorded Videos project
lists: Platform for Acoustic STArtle project
lists: Joystick project
lists: 3DTracker project
lists: AutoPilot project
lists: PiDose project
lists: DeepSqueak project
lists: Rigbox project
lists: Catalepsy Bar project
lists: Dual port Lick Detector project
lists: Pathfinder project
lists: Actifield project
lists: Rodent Activity Detector project
lists: flyPAD project
lists: Automated Home Cage Rodent Two bottle Choice Test project
lists: MedParse project
lists: Voluntary Access Static Incapacitance Chamber project
lists: Laubach Lab GitHub Repository project
lists: BPM Biosignals project
lists: Automated mouse homecage two bottle choice test project
lists: Mousetrap project
lists: Autoreward2 project
lists: Optimouse project
lists: Hao Chen Lab Repository project
lists: AutonoMouse project
lists: Spike Forest project
lists: Closed Loop System project
lists: ArduiPod Box project
lists: Oculomatic Eye Tracking project
lists: Ultrasonic Vocalizations Detector project
lists: Attys project
lists: Calcium Imaging data Analysis project
lists: Feldman Lab Lickometer project
lists: MNE Scan project
lists: Open Source platform for Sensory Tasks project
lists: Scintillate project
lists: Pypreclin project
lists: Wave Surfer project
lists: An open source motorized swivel for in vivo neural and behavioral recordings project
lists: Toolboxes for Spike and LFP Analysis project
lists: BrainGlobe project
lists: UCLA Miniscope project
lists: Cerebro Wireless Optogenetic System project
lists: Home Cage Automated Skilled Reaching Apparatus project
lists: Open-tES project
lists: Capactive Touch Sensor project
lists: CapTouch project
lists: Two Armed Bandit Task project
lists: Novel Gustometer for Human Taste Research project
lists: OpenVape project
lists: Calcium ActiVity Explorer
lists: Pi Virtual Reality System project
lists: BonVision project
lists: FinchScope project
lists: Mousecam
lists: ezTrack
lists: DIY-NAMIC project
lists: Precision Syringe Pump Controller project
lists: idtracker.ai
lists: Stytra
lists: EthoScopes
lists: Worm Behavior Platform
lists: Ardbark project
lists: FaceMap
lists: M-Track
lists: ToxTrac
lists: Pyper
lists: Low Cost Open Source Eye Tracking
lists: Automated Rodent Tracker
lists: Live Mouse Tracker analysis
lists: LinCoM
lists: Skinner Box
lists: 3DTracker
lists: Pathfinder
lists: Behavioral Observation Research Interactive Software
lists: MNE Scan
lists: Quantifying Animal Movement from Pre-recorded Videos
lists: Rigbox
lists: Platform for Acoustic STArtle
lists: DeepSqueak
lists: Oculomatic
lists: Wave Surfer
lists: EthoWatcher
lists: MedParse
lists: Bonsai
lists: Scintillate
lists: AutoPilot
lists: Spike Forest
lists: flyPAD
lists: Optimouse
lists: Calcium Imaging data Analysis
lists: BonVision
lists: Dual Port Lick Detector
lists: Pypreclin
lists: ACRoBaT
lists: Visual stimulator with customizable light spectra
lists: ToneBox
lists: 3DOC
lists: MouseBytes
lists: Touchscreen Cognition
lists: FreemoVR project
lists: Modular Automated Platform for Large Scale Experiments project
lists: OpenFeeder
lists: SnackClock
lists: SignalBuddy
lists: ArControl project
lists: Airtrack
lists: Teensy-Based Interface project
lists: Autonomous Training of a Forelimb Motor Task project
lists: Ratcave project
lists: DIY Rodent Running Disk
lists: Moving Wall Box
lists: Operant Box for Auditory Tasks project
lists: Camera Control project
lists: FlyPi
lists: CerebraLux
lists: Automated Home-Cage Functional Imaging project
lists: Pearce Lab Syringe Pump project
lists: Craniobot project
lists: PhotometryBox
lists: Pulse Pal project
lists: NINscope
lists: Nose Poke Device
lists: pyControl project
lists: OpenMV project
lists: Rodent Operant Bucket project
lists: Tetroplater
lists: OpenSpritzer
lists: Argus
lists: NeRD
lists: PRiED
lists: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project
lists: MouseMove project
lists: Eco-HAB
lists: Homecage Task Training and Mesoscale Imaging project
lists: Microwave based Homecage Motion Detector project
lists: CHEndoscope
lists: Robotic Flower System for Bee Behavior project
lists: TRIO Platform
lists: A Head Mounted Multi Camera System for Freely Moving Mice project
lists: Ratcave
lists: 4 Port Nose Poke
lists: An Opensource lickometer and microstructure analysis program
lists: Automated Classification of Self-grooming in Mice project
lists: FreemoVR
lists: ArControl
lists: Visual Discrimination with an iPad
lists: Teensy-Based Interface
lists: Operant Box for Auditory Tasks
lists: Autonomous Training of a Forelimb Motor Task
lists: 3D Printed Headcap and Microdrive
lists: poke device arduino
lists: MouseBytes
lists: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology
lists: Rodent Operant Bucket
lists: Camera Control
lists: linear actuator
lists: Modular Automated Platform for Large Scale Experiments
lists: pyControl
lists: Argus
lists: NINscope software
lists: OpenMV
lists: MouseMove
lists: chendoscope
lists: craniobot
lists: Pulse Pal
lists: Automated Home-Cage Functional Imaging
lists: AutoHeadFix
lists: SpikeGadgets
lists: Open Ephys
lists: MRI-stereoscope project
lists: AutomaticSleepScoringTool
lists: Pi-based Remote Acquisition Technology for Motion Capture project
lists: Pi-based Remote Acquisition Technology for Motion Capture
lists: Brainrender
lists: TetrODrive
lists: COMPASS
lists: Cellpose
lists: OORTT
lists: DBscorer
lists: GazeMetrics
lists: AutoStereota
lists: FlyBrainLab
lists: pyOS-5 project
lists: Pyneal
lists: pyOS-5
lists: Atlas Based Analysis
lists: VocalMat
lists: DABEST
lists: Raspberry Pi based auditory stimulus generator
lists: Pain Assessment at Withdrawal Speeds
lists: Florida research open source synchronization tool
lists: Permuco
lists: LED Matrix Stimuli
lists: Mouse Action Recognition System
lists: Behavior Ensemble and Neural Trajectory Observatory
lists: Neonatal Stereotaxic Mouse Adaptor
lists: MARS Developer
lists: EZcalcium
lists: MRI Compatible Microdrive
lists: GuPPy
lists: DeepEthogram
lists: Pycro Manager
lists: DeepBhvTracking
lists: TweetyNet
lists: OpenPose
lists: TRex
lists: SIPEC
lists: Closed Loop Automated Reaching Apparatus
lists: Timed pressure control hardware and software for delivery of air mediated distensions in animal models
lists: CellExplorer
lists: DLStream
lists: SipperViz
lists: Variational Embedding of Animal Motion
lists: SHARCQ
lists: PavCA project
lists: GoFish Ajuwon etal 2022
lists: LED Zappelin’
lists: Minian
lists: Modular LED Displays project
lists: OpenSync
lists: USVCAM
lists: Histological E data Registration in rodent Brain Spaces
lists: Pi USB Cam project
lists: 3D Printed Superfusion Chamber
lists: pyPhotometry
lists: Rtrack
lists: ColonyTrack
lists: Anipose
lists: LiftPose3D
lists: DANNCE
lists: DeepLabCut Project
lists: ACTman
lists: Raspberry Pi Grating
lists: Falcon
lists: OpBox
lists: Mouse Behavioral Analysis Toolbox
lists: Pynapple
lists: Wheel Running Activity acQuisition
lists: CaT-z
lists: M3 Platform
lists: Automated 2 Photon Imaging Compatible Platform for Assessing Working Memory
lists: Rasberry rat
lists: RodentJoystick
lists: tmilltracker
lists: 3D Printed Multi Pump System
lists: BehaviorDEPOT
lists: Open Face Homecage Running Wheel
lists: RatHeadphones
lists: RatInABox
lists: LabNet
lists: JAX Animal Behavior System
lists: AnimalTA
lists: Mousebytes
lists: Lick Instance Quantifier Home cage Device
lists: B-CALM
lists: Freibox
lists: commutator
lists: Customized Guide Cannulas
lists: BrainWAVE
lists: Brainways
lists: LFP Monitoring
lists: PyMouseTracks
lists: Lightning Pose
lists: Customizable Multielectrode Array
lists: Live Mouse Tracker Toolkit Analysis
lists: HFOApp
lists: Synaptic Vesicles Detection
lists: Pipette Finding CNN
lists: 3DP Gustometer
lists: SEB3R
lists: Lickometer Box
lists: Custom-fitting-of-implants
lists: Markerless Mouse Tracking for Social Experiments
lists: FARESHARE
lists: HERBs
lists: E-Scope
lists: PyBehave
lists: ReachOut
lists: One-rat Turnstile
lists: TD_Drive
lists: Holeboard
lists: SaLSa
lists: ghostipy
lists: DREAM implant
lists: HSSM
lists: High-Precision Optical Fiber-Based Lickometer
lists: NC4gate
lists: ArUco
lists: STPoseNet
lists: Bell Jar
lists: Implant for Reliable Diaphragm EMG Recordings in Awake, Behaving Rats
lists: Active Commutator 		Public SCR_015938 2026-08-15 11:29:55 5

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