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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
SAIBR
 
Resource Report
Resource Website
1+ mentions
SAIBR (RRID:SCR_024804) software application, software resource Software application as platform independent protocol and FIJI plug-in to correct for autofluorescence using standard filter sets and illumination conditions. Spectral autofluorescence correction method based on simple 2- or 3-Channel images implemented in Python and Fiji. Used for performing spectral autofluorescence correction on biological images. performing spectral autofluorescence correction, biological images, autofluorescence correction, is a plug in for: Fiji NIH Office of the Director P40 OD010440 PMID:35713287 Free, Available for download, Freely available SCR_024804 Spectral Autofluorescence Image Correction By Regression 2026-08-20 09:31:26 1
Fiji
 
Resource Report
Resource Website
10000+ mentions
Fiji (RRID:SCR_002285) Fiji data processing software, image processing software, software application, software resource, source code Software package as distribution of ImageJ and ImageJ2 together with Java, Java3D and plugins organized into coherent menu structure. Used to assist research in life sciences. imaging, microscopy, windows, linux, java, mac osx, bio.tools uses: Fiji/ImageJ
is used by: MuscleJ
is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
is related to: ImageJ
is related to: SynapseLocator
is related to: Golddigger
is related to: Analyze Spheroid Cell Invasion In 3D Matrix
has parent organization: Max Planck Institute of Molecular Cell Biology and Genetics; Dresden; Germany
has plug in: BioVoxxel Toolbox
has plug in: imctools
has plug in: Big Data Processor
has plug in: Sholl Analysis
has plug in: SAIBR
has plug in: TWOMBLI
PMID:22743772 Free, Available for download, Freely available, Acknowledgement requested SciRes_000137, biotools:Fiji https://github.com/fiji/fiji, https://bio.tools/Fiji SCR_002285 Fiji is just ImageJ 2026-08-21 12:36:39 40972

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