Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
MEGA Resource Report Resource Website 1000+ mentions |
MEGA (RRID:SCR_000667) | MEGA, MEGA6, MEGA4, MEGA 4, MEGA 11 | data analysis software, data processing software, sequence analysis software, software application, software resource, software toolkit | Software integrated tool for conducting automatic and manual sequence alignment, inferring phylogenetic trees, mining web based databases, estimating rates of molecular evolution, and testing evolutionary hypotheses. Used for comparative analysis of DNA and protein sequences to infer molecular evolutionary patterns of genes, genomes, and species over time. MEGA version 4 expands on existing facilities for editing DNA sequence data from autosequencers, mining Web-databases, performing automatic and manual sequence alignment, analyzing sequence alignments to estimate evolutionary distances, inferring phylogenetic trees, and testing evolutionary hypotheses. MEGA version 6 enables inference of timetrees, as it implements RelTime method for estimating divergence times for all branching points in phylogeny. | comparative, analysis, DNA, protein, sequence, molecular, evolution, pattern, gene, genome, evolution, FASEB list | has parent organization: Pennsylvania State University | Burroughs-Wellcome Fund ; Japan Society for the Promotion of Science ; NHGRI HG002096; NHGRI HG006039; NIGMS R01GM126567; NIGMS R35GM139504; NSF ABI 1661218 |
DOI:10.1093/molbev/msab120 PMID:24132122 PMID:31904846 PMID:22923298 PMID:21546353 PMID:17488738 PMID:15260895 PMID:11751241 PMID:8019868 |
Free, Available for download, Freely available | SCR_023017, nlx_156838 | https://www.megasoftware.net/mega4/ | SCR_000667 | MEGA11, Molecular Evolutionary Genetics Analysis, Molecular Evolutionary Genetics Analysis 6, Molecular Evolutionary Genetics Analysis 4 | 2026-08-21 12:36:20 | 2774 | ||||
|
Pennsylvania State University Resource Report Resource Website 10+ mentions |
Pennsylvania State University (RRID:SCR_011484) | PSU, Penn State | university | Public, research university. Includes undergraduate, graduate, professional and continuing education offered through resident instruction and online. | undergraduate, graduate, master's, doctoral, phD, institution, university |
is parent organization of: Miller Lab at the Penn State Center for Comparative Genomics and Bioinformatics is parent organization of: Globin Gene Server is parent organization of: Pennsylvania State Hershey College of Medicine; Pennsylvania; USA is parent organization of: Neotoma Paleoecology Database is parent organization of: Seattle Longitudinal Study is parent organization of: Pennsylvania State University Huck Institutes of the Life Sciences Neuroscience Graduate Program is parent organization of: CREST is parent organization of: Galaxy is parent organization of: Zebrafish Atlas is parent organization of: Database of Human Hemoglobin Variants and Thalassemias is parent organization of: PlantTribes is parent organization of: PhenCode is parent organization of: ShortStack is parent organization of: PipMaker and MultiPipMaker is parent organization of: Penn State Drug Discovery Development and Delivery Core is parent organization of: Penn State Center of Excellence in Nutrigenomics is parent organization of: Pennsylvania State University Materials Characterization Lab Core Facility is parent organization of: Penn State Cancer Institute Organic Synthesis Core Facility is parent organization of: Pennsylvania State University Labs and Facilities is parent organization of: Chloroplast Genome Database is parent organization of: Critical Zone Observatories is parent organization of: GenomeSpace is parent organization of: MEGA is parent organization of: Databrary is parent organization of: 3D Genome is parent organization of: PlasmoDB is parent organization of: Penn State University Center for Applications of Artificial Intelligence and Machine Learning to Industry Core Facility is parent organization of: Penn State University Center for Applications of Artificial Intelligence and Machine Learning to Industry Core Facility is parent organization of: Pennsylvania State University Huck Institutes of the Life Sciences Genomics Core Facility is parent organization of: Pennsylvania State University Huck Institutes of Life Sciences Metabolomics Core Facility is parent organization of: Pennsylvania State University Huck Institutes Microscopy Core Facility is parent organization of: Pennsylvania State University Huck Institutes Cryo-Electron Microscopy Core Facility is parent organization of: Pennsylvania State University Huck Institutes Automated Biological Calorimetry Core Facility is parent organization of: Pennsylvania State University Huck Institutes CSL Behring Fermentation Core Facility is parent organization of: Pennsylvania State University Huck Institutes Flow Cytometry Core Facility is parent organization of: Pennsylvania State University Huck Institutes High Field Magnetic Resonance Imaging Core Facility is parent organization of: Pennsylvania State University Huck Institutes Proteomics and Mass Spectrometry Core Facility is parent organization of: Pennsylvania State University Huck Institutes Sartorius Cell Culture Core Facility is parent organization of: Pennsylvania State University Huck Institutes X-Ray Crystallography Core Facility is parent organization of: Pennsylvania State University Huck Institutes Genomics Research Incubator Core Facility is parent organization of: Penn State Critical Illness and Sepsis Research Center Core Facility is parent organization of: Penn State Institute of Computational and Data Sciences Roar Core Facility is parent organization of: Penn State University Center for Immersive Experiences Core Facility is parent organization of: Pennsylvania State University RISE Core Facility is parent organization of: Pennsylvania State University Nanofabrication Lab Core Facility is parent organization of: Pennsylvania State University Honey and Pollen Diagnostic Laboratory Core Facility is parent organization of: Pennsylvania State University Environmental Contaminants Analytical Laboratory Core Facility is parent organization of: Pennsylvania State University Energy and Environmental Sustainability Laboratories Core Facility hosts: Pennsylvania State University SLEIC |
Wikidata:Q739627, Crossref funder ID:100008321, grid.29857.31, nlx_32060, ISNI:0000 0001 2097 4281 | https://ror.org/04p491231 | SCR_011484 | Penn State, Pennsylvania State University, Penn State University | 2026-08-15 11:24:26 | 11 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.